RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
LINC01539-201ENST00000587904 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
LINC01539-201ENST00000587904 COX7BP24311 80 aa6.29□□□□□ -1.4
LINC01539-201ENST00000587904 NUPR2A6NF83 97 aa6.28□□□□□ -1.4
LINC01539-201ENST00000587904 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
LINC01539-201ENST00000587904 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
LINC01539-201ENST00000587904 Q9BRP9 147 aa6.27□□□□□ -1.41
LINC01539-201ENST00000587904 APLNQ9ULZ1 77 aa6.27□□□□□ -1.41
LINC01539-201ENST00000587904 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
LINC01539-201ENST00000587904 TGP01266 2768 aa6.26□□□□□ -1.41
LINC01539-201ENST00000587904 UBE2DNLQ8IWF7 75 aa6.26□□□□□ -1.41
LINC01539-201ENST00000587904 A6NED7 52 aa6.26□□□□□ -1.41
LINC01539-201ENST00000587904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
LINC01539-201ENST00000587904 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
LINC01539-201ENST00000587904 FAM30AQ9NZY2 134 aa6.25□□□□□ -1.41
LINC01539-201ENST00000587904 IGLV6-57P01721 117 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 Q8NDZ9 215 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
LINC01539-201ENST00000587904 Q6ZQY7 126 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 Q8N9L7 120 aa6.24□□□□□ -1.41
LINC01539-201ENST00000587904 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
LINC01539-201ENST00000587904 MOBPQ13875 183 aa6.23□□□□□ -1.41
LINC01539-201ENST00000587904 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
LINC01539-201ENST00000587904 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
LINC01539-201ENST00000587904 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
LINC01539-201ENST00000587904 A0A1B0GW54 56 aa6.22□□□□□ -1.41
LINC01539-201ENST00000587904 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
LINC01539-201ENST00000587904 CASC10Q5T4H9 136 aa6.2□□□□□ -1.42
LINC01539-201ENST00000587904 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
LINC01539-201ENST00000587904 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
LINC01539-201ENST00000587904 C14orf177Q52M58 125 aa6.19□□□□□ -1.42
LINC01539-201ENST00000587904 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
LINC01539-201ENST00000587904 A0A087X002 238 aa6.18□□□□□ -1.42
LINC01539-201ENST00000587904 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
LINC01539-201ENST00000587904 IGLV5-37A0A075B6J1 123 aa6.17□□□□□ -1.42
LINC01539-201ENST00000587904 C3orf84H3BNL1 204 aa6.17□□□□□ -1.42
LINC01539-201ENST00000587904 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
LINC01539-201ENST00000587904 NBDYA0A0U1RRE5 68 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 LINC00313P59037 77 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 PRR4Q16378 134 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 CSMD3Q7Z407 3707 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 H3BPC8 53 aa6.16□□□□□ -1.42
LINC01539-201ENST00000587904 PLECQ15149 4684 aaKnown RBP6.15□□□□□ -1.42
LINC01539-201ENST00000587904 MP68P56378 58 aa6.15□□□□□ -1.42
LINC01539-201ENST00000587904 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
LINC01539-201ENST00000587904 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
LINC01539-201ENST00000587904 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
LINC01539-201ENST00000587904 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
LINC01539-201ENST00000587904 ST20-AS1Q8NBB2 130 aa6.14□□□□□ -1.43
LINC01539-201ENST00000587904 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
LINC01539-201ENST00000587904 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
LINC01539-201ENST00000587904 LYSTQ99698 3801 aa6.13□□□□□ -1.43
LINC01539-201ENST00000587904 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
LINC01539-201ENST00000587904 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
LINC01539-201ENST00000587904 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
LINC01539-201ENST00000587904 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
LINC01539-201ENST00000587904 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
LINC01539-201ENST00000587904 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
LINC01539-201ENST00000587904 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
LINC01539-201ENST00000587904 SPRR1AP35321 89 aa6.08□□□□□ -1.44
LINC01539-201ENST00000587904 A0A096LNI7 61 aa6.07□□□□□ -1.44
LINC01539-201ENST00000587904 COA5Q86WW8 74 aa6.07□□□□□ -1.44
LINC01539-201ENST00000587904 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
LINC01539-201ENST00000587904 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
LINC01539-201ENST00000587904 DHRS4-AS1Q9P1J3 65 aa6.07□□□□□ -1.44
LINC01539-201ENST00000587904 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
LINC01539-201ENST00000587904 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
LINC01539-201ENST00000587904 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
LINC01539-201ENST00000587904 DSCR10P59022 87 aa6.06□□□□□ -1.44
LINC01539-201ENST00000587904 Q6ZR54 194 aa6.06□□□□□ -1.44
LINC01539-201ENST00000587904 Q6ZRX8 168 aa6.06□□□□□ -1.44
LINC01539-201ENST00000587904 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
LINC01539-201ENST00000587904 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
LINC01539-201ENST00000587904 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
LINC01539-201ENST00000587904 REG3GQ6UW15 175 aa6.03□□□□□ -1.44
LINC01539-201ENST00000587904 KMT2CQ8NEZ4 4911 aaKnown RBP6.03□□□□□ -1.44
LINC01539-201ENST00000587904 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
LINC01539-201ENST00000587904 A0A087WTM6 91 aa6.02□□□□□ -1.45
LINC01539-201ENST00000587904 H0Y9J4 135 aa6.02□□□□□ -1.45
LINC01539-201ENST00000587904 K7EQZ3 153 aa6.02□□□□□ -1.45
LINC01539-201ENST00000587904 SPINK7P58062 85 aa6.02□□□□□ -1.45
LINC01539-201ENST00000587904 A0A1W2PNN7 141 aa6.01□□□□□ -1.45
LINC01539-201ENST00000587904 H0Y9P7 68 aa6□□□□□ -1.45
LINC01539-201ENST00000587904 SPRR4Q96PI1 79 aa6□□□□□ -1.45
LINC01539-201ENST00000587904 C1orf134Q5TEV5 83 aa6□□□□□ -1.45
LINC01539-201ENST00000587904 Q8NBF4 154 aa6□□□□□ -1.45
LINC01539-201ENST00000587904 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
LINC01539-201ENST00000587904 LINC00476Q8WZB0 136 aa5.99□□□□□ -1.45
LINC01539-201ENST00000587904 DNAH6Q9C0G6 4158 aa5.99□□□□□ -1.45
LINC01539-201ENST00000587904 RTL8CO15255 209 aa5.98□□□□□ -1.45
LINC01539-201ENST00000587904 LY6G6CO95867 125 aa5.98□□□□□ -1.45
LINC01539-201ENST00000587904 CHTF8P0CG12 524 aa5.98□□□□□ -1.45
LINC01539-201ENST00000587904 SPACA4Q8TDM5 124 aa5.97□□□□□ -1.45
LINC01539-201ENST00000587904 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
LINC01539-201ENST00000587904 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms