RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
NFIX-208ENST00000587260 SPINK6Q6UWN8 80 aa9.01□□□□□ -0.97
NFIX-208ENST00000587260 ANKRD29Q8N6D5 301 aa9.01□□□□□ -0.97
NFIX-208ENST00000587260 SPRR1BP22528 89 aa9□□□□□ -0.97
NFIX-208ENST00000587260 Q8N377 158 aa9□□□□□ -0.97
NFIX-208ENST00000587260 MTURNQ8N3F0 131 aa9□□□□□ -0.97
NFIX-208ENST00000587260 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
NFIX-208ENST00000587260 SPRR4Q96PI1 79 aa8.99□□□□□ -0.97
NFIX-208ENST00000587260 ZNF706Q9Y5V0 76 aaPredicted RBP8.99□□□□□ -0.97
NFIX-208ENST00000587260 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
NFIX-208ENST00000587260 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
NFIX-208ENST00000587260 LINC00483Q53H64 154 aa8.96□□□□□ -0.97
NFIX-208ENST00000587260 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
NFIX-208ENST00000587260 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
NFIX-208ENST00000587260 NDUFV3P56181 108 aaKnown RBP8.93□□□□□ -0.98
NFIX-208ENST00000587260 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
NFIX-208ENST00000587260 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
NFIX-208ENST00000587260 TEN1Q86WV5 123 aa8.91□□□□□ -0.98
NFIX-208ENST00000587260 JMJD7-PLA2G4BH0Y9G9 81 aa8.9□□□□□ -0.98
NFIX-208ENST00000587260 KRTAP1-4P0C5Y4 121 aa8.9□□□□□ -0.98
NFIX-208ENST00000587260 ETDBQ3ZM63 59 aa8.9□□□□□ -0.98
NFIX-208ENST00000587260 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
NFIX-208ENST00000587260 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
NFIX-208ENST00000587260 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
NFIX-208ENST00000587260 FAM229BQ4G0N7 80 aa8.88□□□□□ -0.99
NFIX-208ENST00000587260 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
NFIX-208ENST00000587260 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
NFIX-208ENST00000587260 A0A087X002 238 aa8.85□□□□□ -0.99
NFIX-208ENST00000587260 F8WEM9 126 aa8.85□□□□□ -0.99
NFIX-208ENST00000587260 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
NFIX-208ENST00000587260 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
NFIX-208ENST00000587260 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
NFIX-208ENST00000587260 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
NFIX-208ENST00000587260 TRBV7-4A0A0J9YYF1 115 aa8.83□□□□□ -1
NFIX-208ENST00000587260 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
NFIX-208ENST00000587260 CRYGAP11844 174 aa8.82□□□□□ -1
NFIX-208ENST00000587260 PDE6GP18545 87 aa8.81□□□□□ -1
NFIX-208ENST00000587260 Q6JHZ5 121 aa8.81□□□□□ -1
NFIX-208ENST00000587260 DSCR8Q96T75 97 aa8.81□□□□□ -1
NFIX-208ENST00000587260 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
NFIX-208ENST00000587260 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
NFIX-208ENST00000587260 C14orf132Q9NPU4 83 aa8.8□□□□□ -1
NFIX-208ENST00000587260 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
NFIX-208ENST00000587260 A0A1B0GV72 72 aa8.8□□□□□ -1
NFIX-208ENST00000587260 MOBPQ13875 183 aa8.79□□□□□ -1
NFIX-208ENST00000587260 C21orf62-AS1Q17RA5 79 aa8.79□□□□□ -1
NFIX-208ENST00000587260 Q8NBF4 154 aa8.79□□□□□ -1
NFIX-208ENST00000587260 IGFL1Q6UW32 110 aa8.78□□□□□ -1
NFIX-208ENST00000587260 Q6ZQT0 140 aa8.78□□□□□ -1
NFIX-208ENST00000587260 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
NFIX-208ENST00000587260 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
NFIX-208ENST00000587260 OXTP01178 125 aa8.75□□□□□ -1.01
NFIX-208ENST00000587260 CCKP06307 115 aa8.75□□□□□ -1.01
NFIX-208ENST00000587260 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
NFIX-208ENST00000587260 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
NFIX-208ENST00000587260 Q6Q795 121 aa8.73□□□□□ -1.01
NFIX-208ENST00000587260 A0A1B0GW54 56 aa8.72□□□□□ -1.01
NFIX-208ENST00000587260 MT1HL1P0DM35 61 aa8.72□□□□□ -1.01
NFIX-208ENST00000587260 A0A0G2JQZ4 141 aa8.71□□□□□ -1.01
NFIX-208ENST00000587260 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
NFIX-208ENST00000587260 J3QR89 54 aa8.7□□□□□ -1.02
NFIX-208ENST00000587260 CD164Q04900 197 aa8.7□□□□□ -1.02
NFIX-208ENST00000587260 TNXBP22105 4242 aa8.69□□□□□ -1.02
NFIX-208ENST00000587260 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
NFIX-208ENST00000587260 K7ERU9 68 aa8.67□□□□□ -1.02
NFIX-208ENST00000587260 ACYP1P07311 99 aa8.67□□□□□ -1.02
NFIX-208ENST00000587260 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
NFIX-208ENST00000587260 HERC1Q15751 4861 aa8.67□□□□□ -1.02
NFIX-208ENST00000587260 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
NFIX-208ENST00000587260 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
NFIX-208ENST00000587260 TRBV7-7A0A0K0K1E9 115 aa8.64□□□□□ -1.03
NFIX-208ENST00000587260 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
NFIX-208ENST00000587260 SPAG11AQ6PDA7 123 aa8.62□□□□□ -1.03
NFIX-208ENST00000587260 LINC00846Q9NV44 126 aa8.61□□□□□ -1.03
NFIX-208ENST00000587260 A0A087WSZ3 146 aa8.6□□□□□ -1.03
NFIX-208ENST00000587260 SPINK1P00995 79 aa8.6□□□□□ -1.03
NFIX-208ENST00000587260 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
NFIX-208ENST00000587260 Q5XG85 94 aa8.59□□□□□ -1.03
NFIX-208ENST00000587260 SS18L2Q9UHA2 77 aa8.57□□□□□ -1.04
NFIX-208ENST00000587260 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
NFIX-208ENST00000587260 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
NFIX-208ENST00000587260 NREPQ16612 68 aa8.54□□□□□ -1.04
NFIX-208ENST00000587260 Q6ZVQ6 151 aa8.54□□□□□ -1.04
NFIX-208ENST00000587260 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
NFIX-208ENST00000587260 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
NFIX-208ENST00000587260 LCE2BO14633 110 aa8.53□□□□□ -1.04
NFIX-208ENST00000587260 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
NFIX-208ENST00000587260 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
NFIX-208ENST00000587260 Q96NJ1 140 aa8.49□□□□□ -1.05
NFIX-208ENST00000587260 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
NFIX-208ENST00000587260 J3KT08 172 aa8.45□□□□□ -1.06
NFIX-208ENST00000587260 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
NFIX-208ENST00000587260 CXCL6P80162 114 aa8.44□□□□□ -1.06
NFIX-208ENST00000587260 ATP5EP2Q5VTU8 51 aa8.44□□□□□ -1.06
NFIX-208ENST00000587260 BPY2O14599 106 aa8.44□□□□□ -1.06
NFIX-208ENST00000587260 SIGMAR1Q99720 223 aa8.44□□□□□ -1.06
NFIX-208ENST00000587260 DEFB116Q30KQ4 102 aa8.42□□□□□ -1.06
NFIX-208ENST00000587260 IGKV4-1P06312 121 aa8.4□□□□□ -1.06
NFIX-208ENST00000587260 DSCR10P59022 87 aa8.4□□□□□ -1.06
NFIX-208ENST00000587260 PRR4Q16378 134 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms