RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 K7ERJ3 54 aa6.55□□□□□ -1.36
LIG3-207ENST00000586119 Q8NBF4 154 aa6.55□□□□□ -1.36
LIG3-207ENST00000586119 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
LIG3-207ENST00000586119 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
LIG3-207ENST00000586119 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
LIG3-207ENST00000586119 B5MCH6 92 aa6.54□□□□□ -1.36
LIG3-207ENST00000586119 H3BMG7 143 aa6.54□□□□□ -1.36
LIG3-207ENST00000586119 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
LIG3-207ENST00000586119 Q6ZRX8 168 aa6.54□□□□□ -1.36
LIG3-207ENST00000586119 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
LIG3-207ENST00000586119 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 SMIM11BQ8TCY0 68 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 PRO1854Q9UHT4 67 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 PRO0461Q9UI25 63 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
LIG3-207ENST00000586119 COX7BP24311 80 aa6.52□□□□□ -1.37
LIG3-207ENST00000586119 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
LIG3-207ENST00000586119 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
LIG3-207ENST00000586119 ELOF1P60002 83 aaKnown RBP6.51□□□□□ -1.37
LIG3-207ENST00000586119 DHRS4-AS1Q9P1J3 65 aa6.51□□□□□ -1.37
LIG3-207ENST00000586119 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
LIG3-207ENST00000586119 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
LIG3-207ENST00000586119 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
LIG3-207ENST00000586119 PPDPFLQ8WWR9 84 aa6.49□□□□□ -1.37
LIG3-207ENST00000586119 ETDBQ3ZM63 59 aa6.48□□□□□ -1.37
LIG3-207ENST00000586119 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
LIG3-207ENST00000586119 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
LIG3-207ENST00000586119 Q9BRP9 147 aa6.48□□□□□ -1.37
LIG3-207ENST00000586119 H7C2G1 150 aa6.47□□□□□ -1.37
LIG3-207ENST00000586119 Q1RN00 199 aa6.47□□□□□ -1.37
LIG3-207ENST00000586119 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
LIG3-207ENST00000586119 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 A0A1B0GV72 72 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 H0YGX0 51 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 SLC25A20O43772 301 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 SPINK1P00995 79 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 MOBPQ13875 183 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 Q8N377 158 aa6.46□□□□□ -1.38
LIG3-207ENST00000586119 PSMB2P49721 201 aa6.45□□□□□ -1.38
LIG3-207ENST00000586119 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
LIG3-207ENST00000586119 LINC00483Q53H64 154 aa6.45□□□□□ -1.38
LIG3-207ENST00000586119 SNCGO76070 127 aa6.44□□□□□ -1.38
LIG3-207ENST00000586119 COX6CP09669 75 aa6.44□□□□□ -1.38
LIG3-207ENST00000586119 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
LIG3-207ENST00000586119 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
LIG3-207ENST00000586119 A0A1B0GX51 115 aa6.43□□□□□ -1.38
LIG3-207ENST00000586119 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
LIG3-207ENST00000586119 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
LIG3-207ENST00000586119 hADV29S1A0JD25 119 aa6.42□□□□□ -1.38
LIG3-207ENST00000586119 TCL1BO95988 128 aa6.42□□□□□ -1.38
LIG3-207ENST00000586119 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
LIG3-207ENST00000586119 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
LIG3-207ENST00000586119 TRIAP1O43715 76 aa6.41□□□□□ -1.38
LIG3-207ENST00000586119 SPRR1BP22528 89 aa6.41□□□□□ -1.38
LIG3-207ENST00000586119 XP32Q5T750 250 aa6.41□□□□□ -1.38
LIG3-207ENST00000586119 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
LIG3-207ENST00000586119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
LIG3-207ENST00000586119 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
LIG3-207ENST00000586119 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
LIG3-207ENST00000586119 H3BT86 120 aa6.39□□□□□ -1.39
LIG3-207ENST00000586119 GHRHP01286 108 aa6.39□□□□□ -1.39
LIG3-207ENST00000586119 ST20-AS1Q8NBB2 130 aa6.39□□□□□ -1.39
LIG3-207ENST00000586119 ANKRD29Q8N6D5 301 aa6.38□□□□□ -1.39
LIG3-207ENST00000586119 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
LIG3-207ENST00000586119 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 C9JAW5 83 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 MT1HP80294 61 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 Q6ZQY7 126 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 LAMTOR3Q9UHA4 124 aa6.36□□□□□ -1.39
LIG3-207ENST00000586119 H3BQ85 93 aa6.35□□□□□ -1.39
LIG3-207ENST00000586119 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
LIG3-207ENST00000586119 Q6Q795 121 aa6.35□□□□□ -1.39
LIG3-207ENST00000586119 TRACP01848 142 aa6.34□□□□□ -1.39
LIG3-207ENST00000586119 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
LIG3-207ENST00000586119 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
LIG3-207ENST00000586119 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
LIG3-207ENST00000586119 LST1O00453 97 aa6.33□□□□□ -1.4
LIG3-207ENST00000586119 DNAL4O96015 105 aa6.33□□□□□ -1.4
LIG3-207ENST00000586119 IGLV8-61A0A075B6I0 122 aa6.32□□□□□ -1.4
LIG3-207ENST00000586119 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
LIG3-207ENST00000586119 ACYP1P07311 99 aa6.31□□□□□ -1.4
LIG3-207ENST00000586119 F8WEM9 126 aa6.3□□□□□ -1.4
LIG3-207ENST00000586119 MT-ATP8P03928 68 aa6.3□□□□□ -1.4
LIG3-207ENST00000586119 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
LIG3-207ENST00000586119 TMEM256-PLSCR3K7ERE1 68 aa6.29□□□□□ -1.4
LIG3-207ENST00000586119 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
LIG3-207ENST00000586119 NDUFV3P56181 108 aaKnown RBP6.27□□□□□ -1.41
LIG3-207ENST00000586119 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
LIG3-207ENST00000586119 Q6JHZ5 121 aa6.27□□□□□ -1.41
LIG3-207ENST00000586119 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
LIG3-207ENST00000586119 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
LIG3-207ENST00000586119 CD164Q04900 197 aa6.25□□□□□ -1.41
LIG3-207ENST00000586119 A0A0G2JQZ4 141 aa6.24□□□□□ -1.41
LIG3-207ENST00000586119 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms