RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 ETDBQ3ZM63 59 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 RPL13AP3Q6NVV1 102 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 ZNF720Q7Z2F6 126 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 SERP2Q8N6R1 65 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 CHD7Q9P2D1 2997 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 TEX14Q8IWB6 1497 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.75□□□□□ -2.53
SKA2-210ENST00000584089 D6R8Y8 96 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 DLEU1O43261 78 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 MUSTN1Q8IVN3 82 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 TMEM203Q969S6 136 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 PRO3102Q9H379 93 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 ITSN1Q15811 1721 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 DDX60LQ5H9U9 1706 aaKnown RBP-0.76□□□□□ -2.53
SKA2-210ENST00000584089 UBR1Q8IWV7 1749 aa-0.76□□□□□ -2.53
SKA2-210ENST00000584089 CDC42BPAQ5VT25 1732 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 DOT1LQ8TEK3 1739 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 DIP2BQ9P265 1576 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 ATP10BO94823 1461 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 LYNX1G3V0Z9 82 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 ASIPP42127 132 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 GTF2H5Q6ZYL4 71 aa-0.77□□□□□ -2.53
SKA2-210ENST00000584089 ANKRD36CQ5JPF3 1778 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 ZC3H13Q5T200 1668 aaKnown RBP-0.78□□□□□ -2.53
SKA2-210ENST00000584089 A0A1B0GUT8 65 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 TMEM218A2RU14 115 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 LEPROTL1O95214 131 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 MT1HL1P0DM35 61 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 LINC00158P58513 81 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 CELSR3Q9NYQ7 3312 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 TLN1Q9Y490 2541 aaKnown RBP-0.78□□□□□ -2.53
SKA2-210ENST00000584089 ARFGEF2Q9Y6D5 1785 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 ANKRD26Q9UPS8 1709 aa-0.78□□□□□ -2.53
SKA2-210ENST00000584089 CSMD1Q96PZ7 3565 aa-0.78□□□□□ -2.54
SKA2-210ENST00000584089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.79□□□□□ -2.54
SKA2-210ENST00000584089 CEP162Q5TB80 1403 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 BPTFQ12830 3046 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 UQCRHLA0A096LP55 91 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 A0A1B0GV90 55 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 F8WEM9 126 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 GNGT2O14610 69 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 CYB5AP00167 134 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 MT1EP04732 61 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 PLGLAQ15195 96 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 GAFA1Q96PS6 74 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 PMCHL2Q9BQD1 86 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 C2orf88Q9BSF0 95 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 FAM107BQ9H098 131 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 SRCAPQ6ZRS2 3230 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 PARP4Q9UKK3 1724 aaKnown RBP-0.79□□□□□ -2.54
SKA2-210ENST00000584089 TOGARAM1Q9Y4F4 1720 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 ITSN2Q9NZM3 1697 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 TMEM131LA2VDJ0 1609 aa-0.79□□□□□ -2.54
SKA2-210ENST00000584089 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.8□□□□□ -2.54
SKA2-210ENST00000584089 NDUFB1O75438 58 aa-0.8□□□□□ -2.54
SKA2-210ENST00000584089 HMGN2P05204 90 aaKnown RBP-0.8□□□□□ -2.54
SKA2-210ENST00000584089 LINC00032P0C843 101 aa-0.8□□□□□ -2.54
SKA2-210ENST00000584089 SARNPP82979 210 aaKnown RBP-0.8□□□□□ -2.54
SKA2-210ENST00000584089 CLPSL2Q6UWE3 100 aa-0.8□□□□□ -2.54
SKA2-210ENST00000584089 GNG8Q9UK08 70 aa-0.8□□□□□ -2.54
SKA2-210ENST00000584089 TRRAPQ9Y4A5 3859 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 PLIN4Q96Q06 1357 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 ZNF831Q5JPB2 1677 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 CFAP43Q8NDM7 1665 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 RNF17Q9BXT8 1623 aaKnown RBP-0.81□□□□□ -2.54
SKA2-210ENST00000584089 MAP3K4Q9Y6R4 1608 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 IQCF6A8MYZ5 107 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 HMGA1P17096 107 aaKnown RBP-0.81□□□□□ -2.54
SKA2-210ENST00000584089 S100A1P23297 94 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 SMIM11AP58511 58 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 KRTAP8-1Q8IUC2 63 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 URB2Q14146 1524 aaKnown RBP-0.81□□□□□ -2.54
SKA2-210ENST00000584089 KIAA0586Q9BVV6 1533 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 PLCH1Q4KWH8 1693 aa-0.81□□□□□ -2.54
SKA2-210ENST00000584089 SMR3BP02814 79 aaPredicted RBP-0.82□□□□□ -2.54
SKA2-210ENST00000584089 TNP1P09430 55 aa-0.82□□□□□ -2.54
SKA2-210ENST00000584089 IFI6P09912 130 aa-0.82□□□□□ -2.54
SKA2-210ENST00000584089 IAPPP10997 89 aa-0.82□□□□□ -2.54
SKA2-210ENST00000584089 DEFB106AQ8N104 65 aa-0.82□□□□□ -2.54
SKA2-210ENST00000584089 DYNC1H1Q14204 4646 aaKnown RBP-0.82□□□□□ -2.54
SKA2-210ENST00000584089 ITPR2Q14571 2701 aa-0.82□□□□□ -2.54
SKA2-210ENST00000584089 INO80Q9ULG1 1556 aaPredicted RBP-0.83□□□□□ -2.54
SKA2-210ENST00000584089 AKAP12Q02952 1782 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 LY75O60449 1722 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 DNAH17Q9UFH2 4485 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 KIF1AQ12756 1690 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 TRAV21A0A0B4J279 112 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 MMP24-AS1A0A0U1RRL7 71 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 C20orf202A1L168 122 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 MT-ATP8P03928 68 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 DEFB130BP0DP73 79 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 DEFB130AP0DP74 79 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 MT1LQ93083 61 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 PIK3C2BO00750 1634 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 PPLO60437 1756 aa-0.83□□□□□ -2.54
SKA2-210ENST00000584089 NHSQ6T4R5 1651 aa-0.84□□□□□ -2.54
SKA2-210ENST00000584089 COL5A1-AS1Q5SY13 56 aa-0.84□□□□□ -2.54
SKA2-210ENST00000584089 DPY30Q9C005 99 aa-0.84□□□□□ -2.54
SKA2-210ENST00000584089 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.84□□□□□ -2.54
SKA2-210ENST00000584089 LRRIQ1Q96JM4 1722 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms