RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SRRM2Q9UQ35 2752 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-230ENST00000584042 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
CDK5RAP3-230ENST00000584042 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
CDK5RAP3-230ENST00000584042 KRTAP1-4P0C5Y4 121 aa10.01□□□□□ -0.81
CDK5RAP3-230ENST00000584042 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
CDK5RAP3-230ENST00000584042 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
CDK5RAP3-230ENST00000584042 F8W1H4 67 aa9.99□□□□□ -0.81
CDK5RAP3-230ENST00000584042 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-230ENST00000584042 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
CDK5RAP3-230ENST00000584042 LAMTOR3Q9UHA4 124 aa9.98□□□□□ -0.81
CDK5RAP3-230ENST00000584042 F8WEM9 126 aa9.96□□□□□ -0.82
CDK5RAP3-230ENST00000584042 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-230ENST00000584042 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
CDK5RAP3-230ENST00000584042 ANAPC11Q9NYG5 84 aa9.94□□□□□ -0.82
CDK5RAP3-230ENST00000584042 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
CDK5RAP3-230ENST00000584042 A0A087X002 238 aa9.92□□□□□ -0.82
CDK5RAP3-230ENST00000584042 CRYGAP11844 174 aa9.92□□□□□ -0.82
CDK5RAP3-230ENST00000584042 Q8NBF4 154 aa9.92□□□□□ -0.82
CDK5RAP3-230ENST00000584042 JMJD7-PLA2G4BH0Y9G9 81 aa9.91□□□□□ -0.82
CDK5RAP3-230ENST00000584042 OBSCN-AS1Q96MR7 158 aa9.9□□□□□ -0.82
CDK5RAP3-230ENST00000584042 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
CDK5RAP3-230ENST00000584042 IGLV9-49A0A0B4J1Y8 123 aa9.89□□□□□ -0.83
CDK5RAP3-230ENST00000584042 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
CDK5RAP3-230ENST00000584042 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
CDK5RAP3-230ENST00000584042 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
CDK5RAP3-230ENST00000584042 MOBPQ13875 183 aa9.88□□□□□ -0.83
CDK5RAP3-230ENST00000584042 KRTAP13-2Q52LG2 175 aa9.88□□□□□ -0.83
CDK5RAP3-230ENST00000584042 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-230ENST00000584042 Q6JHZ5 121 aa9.87□□□□□ -0.83
CDK5RAP3-230ENST00000584042 A0A1B0GV72 72 aa9.86□□□□□ -0.83
CDK5RAP3-230ENST00000584042 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
CDK5RAP3-230ENST00000584042 TRBV7-4A0A0J9YYF1 115 aa9.85□□□□□ -0.83
CDK5RAP3-230ENST00000584042 SSBP3-AS1Q7Z2R9 100 aa9.84□□□□□ -0.83
CDK5RAP3-230ENST00000584042 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
CDK5RAP3-230ENST00000584042 DSCR8Q96T75 97 aa9.84□□□□□ -0.83
CDK5RAP3-230ENST00000584042 LOC110117498A0A087WWA1 95 aa9.83□□□□□ -0.84
CDK5RAP3-230ENST00000584042 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
CDK5RAP3-230ENST00000584042 C21orf62-AS1Q17RA5 79 aa9.82□□□□□ -0.84
CDK5RAP3-230ENST00000584042 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
CDK5RAP3-230ENST00000584042 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
CDK5RAP3-230ENST00000584042 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-230ENST00000584042 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
CDK5RAP3-230ENST00000584042 PDE6GP18545 87 aa9.81□□□□□ -0.84
CDK5RAP3-230ENST00000584042 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-230ENST00000584042 MYCBP2O75592 4640 aa9.8□□□□□ -0.84
CDK5RAP3-230ENST00000584042 OXTP01178 125 aa9.79□□□□□ -0.84
CDK5RAP3-230ENST00000584042 Q6ZQT0 140 aa9.79□□□□□ -0.84
CDK5RAP3-230ENST00000584042 TNXBP22105 4242 aa9.78□□□□□ -0.84
CDK5RAP3-230ENST00000584042 CD164Q04900 197 aa9.76□□□□□ -0.85
CDK5RAP3-230ENST00000584042 Q6Q795 121 aa9.76□□□□□ -0.85
CDK5RAP3-230ENST00000584042 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
CDK5RAP3-230ENST00000584042 CCKP06307 115 aa9.75□□□□□ -0.85
CDK5RAP3-230ENST00000584042 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
CDK5RAP3-230ENST00000584042 A0A1W2PNM2 257 aa9.74□□□□□ -0.85
CDK5RAP3-230ENST00000584042 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-230ENST00000584042 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
CDK5RAP3-230ENST00000584042 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
CDK5RAP3-230ENST00000584042 A0A1B0GW54 56 aa9.71□□□□□ -0.86
CDK5RAP3-230ENST00000584042 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.86
CDK5RAP3-230ENST00000584042 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
CDK5RAP3-230ENST00000584042 TRBV7-7A0A0K0K1E9 115 aa9.7□□□□□ -0.86
CDK5RAP3-230ENST00000584042 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-230ENST00000584042 SPINK1P00995 79 aa9.68□□□□□ -0.86
CDK5RAP3-230ENST00000584042 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
CDK5RAP3-230ENST00000584042 HRCT1Q6UXD1 115 aa9.66□□□□□ -0.86
CDK5RAP3-230ENST00000584042 A0A087WSZ3 146 aa9.65□□□□□ -0.86
CDK5RAP3-230ENST00000584042 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
CDK5RAP3-230ENST00000584042 LIMD2Q9BT23 127 aa9.65□□□□□ -0.86
CDK5RAP3-230ENST00000584042 J3QR89 54 aa9.64□□□□□ -0.87
CDK5RAP3-230ENST00000584042 Q5XG85 94 aa9.64□□□□□ -0.87
CDK5RAP3-230ENST00000584042 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
CDK5RAP3-230ENST00000584042 PCLOQ9Y6V0 5065 aa9.63□□□□□ -0.87
CDK5RAP3-230ENST00000584042 ACYP1P07311 99 aa9.61□□□□□ -0.87
CDK5RAP3-230ENST00000584042 ASB16-AS1Q495Z4 193 aa9.59□□□□□ -0.87
CDK5RAP3-230ENST00000584042 J3QL48 77 aa9.58□□□□□ -0.88
CDK5RAP3-230ENST00000584042 K7ERU9 68 aa9.57□□□□□ -0.88
CDK5RAP3-230ENST00000584042 LINC00846Q9NV44 126 aa9.56□□□□□ -0.88
CDK5RAP3-230ENST00000584042 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
CDK5RAP3-230ENST00000584042 Q6ZVQ6 151 aa9.52□□□□□ -0.89
CDK5RAP3-230ENST00000584042 DMBT1Q9UGM3 2413 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-230ENST00000584042 NREPQ16612 68 aa9.51□□□□□ -0.89
CDK5RAP3-230ENST00000584042 Q96NJ1 140 aa9.51□□□□□ -0.89
CDK5RAP3-230ENST00000584042 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
CDK5RAP3-230ENST00000584042 C1orf195Q5TG92 126 aa9.48□□□□□ -0.89
CDK5RAP3-230ENST00000584042 J3KT08 172 aa9.45□□□□□ -0.9
CDK5RAP3-230ENST00000584042 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
CDK5RAP3-230ENST00000584042 ATP5EP2Q5VTU8 51 aa9.42□□□□□ -0.9
CDK5RAP3-230ENST00000584042 FP248Q71RG6 208 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-230ENST00000584042 RETNLBQ9BQ08 111 aa9.42□□□□□ -0.9
CDK5RAP3-230ENST00000584042 CDIP1Q9H305 208 aa9.42□□□□□ -0.9
CDK5RAP3-230ENST00000584042 BPY2O14599 106 aa9.41□□□□□ -0.9
CDK5RAP3-230ENST00000584042 IGKV4-1P06312 121 aa9.41□□□□□ -0.9
CDK5RAP3-230ENST00000584042 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
CDK5RAP3-230ENST00000584042 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
CDK5RAP3-230ENST00000584042 CXCL6P80162 114 aa9.39□□□□□ -0.91
CDK5RAP3-230ENST00000584042 A8MWP4 228 aa9.37□□□□□ -0.91
CDK5RAP3-230ENST00000584042 DSCR10P59022 87 aa9.36□□□□□ -0.91
CDK5RAP3-230ENST00000584042 NDUFB1O75438 58 aa9.33□□□□□ -0.92
CDK5RAP3-230ENST00000584042 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
CDK5RAP3-230ENST00000584042 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms