RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 FAM229BQ4G0N7 80 aa6.98□□□□□ -1.29
CDRT1-207ENST00000583965 LINC00483Q53H64 154 aa6.98□□□□□ -1.29
CDRT1-207ENST00000583965 Q6ZQY7 126 aa6.98□□□□□ -1.29
CDRT1-207ENST00000583965 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
CDRT1-207ENST00000583965 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
CDRT1-207ENST00000583965 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
CDRT1-207ENST00000583965 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
CDRT1-207ENST00000583965 SPRR1BP22528 89 aa6.96□□□□□ -1.3
CDRT1-207ENST00000583965 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
CDRT1-207ENST00000583965 OXTP01178 125 aa6.95□□□□□ -1.3
CDRT1-207ENST00000583965 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
CDRT1-207ENST00000583965 J3QR89 54 aa6.94□□□□□ -1.3
CDRT1-207ENST00000583965 K7ERU9 68 aa6.94□□□□□ -1.3
CDRT1-207ENST00000583965 CRYGAP11844 174 aa6.94□□□□□ -1.3
CDRT1-207ENST00000583965 DEFB105AQ8NG35 78 aa6.94□□□□□ -1.3
CDRT1-207ENST00000583965 JMJD7-PLA2G4BH0Y9G9 81 aa6.93□□□□□ -1.3
CDRT1-207ENST00000583965 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
CDRT1-207ENST00000583965 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
CDRT1-207ENST00000583965 Q8N377 158 aa6.92□□□□□ -1.3
CDRT1-207ENST00000583965 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
CDRT1-207ENST00000583965 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
CDRT1-207ENST00000583965 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
CDRT1-207ENST00000583965 A0A087X002 238 aa6.91□□□□□ -1.3
CDRT1-207ENST00000583965 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
CDRT1-207ENST00000583965 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
CDRT1-207ENST00000583965 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
CDRT1-207ENST00000583965 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
CDRT1-207ENST00000583965 SMIM29Q86T20 159 aa6.89□□□□□ -1.31
CDRT1-207ENST00000583965 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
CDRT1-207ENST00000583965 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
CDRT1-207ENST00000583965 C21orf62-AS1Q17RA5 79 aa6.88□□□□□ -1.31
CDRT1-207ENST00000583965 TYMSOSQ8TAI1 123 aa6.88□□□□□ -1.31
CDRT1-207ENST00000583965 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 FAM240AA0A1B0GVK7 77 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 F8WEM9 126 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 SSBP3-AS1Q7Z2R9 100 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
CDRT1-207ENST00000583965 LOC110117498A0A087WWA1 95 aa6.86□□□□□ -1.31
CDRT1-207ENST00000583965 PDE6GP18545 87 aa6.86□□□□□ -1.31
CDRT1-207ENST00000583965 RBM3P98179 157 aaKnown RBP6.86□□□□□ -1.31
CDRT1-207ENST00000583965 MOBPQ13875 183 aa6.86□□□□□ -1.31
CDRT1-207ENST00000583965 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
CDRT1-207ENST00000583965 Q8NBF4 154 aa6.86□□□□□ -1.31
CDRT1-207ENST00000583965 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
CDRT1-207ENST00000583965 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
CDRT1-207ENST00000583965 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
CDRT1-207ENST00000583965 TRBV7-4A0A0J9YYF1 115 aa6.84□□□□□ -1.31
CDRT1-207ENST00000583965 ACYP1P07311 99 aa6.84□□□□□ -1.31
CDRT1-207ENST00000583965 TNXBP22105 4242 aa6.83□□□□□ -1.32
CDRT1-207ENST00000583965 J3QL48 77 aa6.83□□□□□ -1.32
CDRT1-207ENST00000583965 CCKP06307 115 aa6.83□□□□□ -1.32
CDRT1-207ENST00000583965 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-207ENST00000583965 Q6ZQT0 140 aa6.83□□□□□ -1.32
CDRT1-207ENST00000583965 DSCR8Q96T75 97 aa6.83□□□□□ -1.32
CDRT1-207ENST00000583965 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
CDRT1-207ENST00000583965 Q6JHZ5 121 aa6.82□□□□□ -1.32
CDRT1-207ENST00000583965 SPAG11AQ6PDA7 123 aa6.8□□□□□ -1.32
CDRT1-207ENST00000583965 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
CDRT1-207ENST00000583965 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
CDRT1-207ENST00000583965 CDIP1Q9H305 208 aa6.79□□□□□ -1.32
CDRT1-207ENST00000583965 A0A1B0GV72 72 aa6.78□□□□□ -1.32
CDRT1-207ENST00000583965 A0A1B0GW54 56 aa6.78□□□□□ -1.32
CDRT1-207ENST00000583965 CD164Q04900 197 aa6.77□□□□□ -1.33
CDRT1-207ENST00000583965 IGFL1Q6UW32 110 aa6.77□□□□□ -1.33
CDRT1-207ENST00000583965 SPINK1P00995 79 aa6.76□□□□□ -1.33
CDRT1-207ENST00000583965 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
CDRT1-207ENST00000583965 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
CDRT1-207ENST00000583965 Q6Q795 121 aa6.73□□□□□ -1.33
CDRT1-207ENST00000583965 A0A0G2JQZ4 141 aa6.72□□□□□ -1.33
CDRT1-207ENST00000583965 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
CDRT1-207ENST00000583965 LINC00846Q9NV44 126 aa6.72□□□□□ -1.33
CDRT1-207ENST00000583965 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
CDRT1-207ENST00000583965 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
CDRT1-207ENST00000583965 LIMD2Q9BT23 127 aa6.71□□□□□ -1.34
CDRT1-207ENST00000583965 TRBV7-7A0A0K0K1E9 115 aa6.69□□□□□ -1.34
CDRT1-207ENST00000583965 Q5XG85 94 aa6.69□□□□□ -1.34
CDRT1-207ENST00000583965 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
CDRT1-207ENST00000583965 SIGMAR1Q99720 223 aa6.67□□□□□ -1.34
CDRT1-207ENST00000583965 SS18L2Q9UHA2 77 aa6.66□□□□□ -1.34
CDRT1-207ENST00000583965 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
CDRT1-207ENST00000583965 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
CDRT1-207ENST00000583965 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.34
CDRT1-207ENST00000583965 Q6ZVQ6 151 aa6.65□□□□□ -1.34
CDRT1-207ENST00000583965 A0A087WSZ3 146 aa6.63□□□□□ -1.35
CDRT1-207ENST00000583965 IMUPQ9GZP8 106 aa6.63□□□□□ -1.35
CDRT1-207ENST00000583965 CXCL6P80162 114 aa6.61□□□□□ -1.35
CDRT1-207ENST00000583965 NREPQ16612 68 aa6.61□□□□□ -1.35
CDRT1-207ENST00000583965 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
CDRT1-207ENST00000583965 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
CDRT1-207ENST00000583965 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
CDRT1-207ENST00000583965 HERC1Q15751 4861 aa6.6□□□□□ -1.35
CDRT1-207ENST00000583965 C1orf195Q5TG92 126 aa6.59□□□□□ -1.35
CDRT1-207ENST00000583965 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.35
CDRT1-207ENST00000583965 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
CDRT1-207ENST00000583965 PRR4Q16378 134 aa6.57□□□□□ -1.36
CDRT1-207ENST00000583965 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
CDRT1-207ENST00000583965 BPY2O14599 106 aa6.55□□□□□ -1.36
CDRT1-207ENST00000583965 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
CDRT1-207ENST00000583965 Q96NJ1 140 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms