RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
SENP3-208ENST00000583277 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
SENP3-208ENST00000583277 FAT1Q14517 4588 aa8.84□□□□□ -0.99
SENP3-208ENST00000583277 F8WEM9 126 aa8.83□□□□□ -1
SENP3-208ENST00000583277 SPINK6Q6UWN8 80 aa8.83□□□□□ -1
SENP3-208ENST00000583277 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
SENP3-208ENST00000583277 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
SENP3-208ENST00000583277 SMIM29Q86T20 159 aa8.82□□□□□ -1
SENP3-208ENST00000583277 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
SENP3-208ENST00000583277 RYR1P21817 5038 aa8.81□□□□□ -1
SENP3-208ENST00000583277 A0A1B0GV72 72 aa8.8□□□□□ -1
SENP3-208ENST00000583277 DSCR8Q96T75 97 aa8.79□□□□□ -1
SENP3-208ENST00000583277 Q5VSD8 79 aa8.78□□□□□ -1
SENP3-208ENST00000583277 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
SENP3-208ENST00000583277 PDE6GP18545 87 aa8.78□□□□□ -1
SENP3-208ENST00000583277 C21orf62-AS1Q17RA5 79 aa8.78□□□□□ -1
SENP3-208ENST00000583277 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
SENP3-208ENST00000583277 LOC110117498A0A087WWA1 95 aa8.77□□□□□ -1.01
SENP3-208ENST00000583277 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
SENP3-208ENST00000583277 J3QR89 54 aa8.76□□□□□ -1.01
SENP3-208ENST00000583277 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
SENP3-208ENST00000583277 KIAA1109Q2LD37 5005 aa8.75□□□□□ -1.01
SENP3-208ENST00000583277 TRBV7-4A0A0J9YYF1 115 aa8.75□□□□□ -1.01
SENP3-208ENST00000583277 Q6JHZ5 121 aa8.74□□□□□ -1.01
SENP3-208ENST00000583277 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
SENP3-208ENST00000583277 IGLV9-49A0A0B4J1Y8 123 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 Q6ZQT0 140 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 Q8N1X5 172 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 KRTAP1-4P0C5Y4 121 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 Q8NBF4 154 aa8.73□□□□□ -1.01
SENP3-208ENST00000583277 K7ERU9 68 aa8.72□□□□□ -1.01
SENP3-208ENST00000583277 CCKP06307 115 aa8.71□□□□□ -1.02
SENP3-208ENST00000583277 CRYGAP11844 174 aa8.7□□□□□ -1.02
SENP3-208ENST00000583277 MOBPQ13875 183 aa8.7□□□□□ -1.02
SENP3-208ENST00000583277 IGFL1Q6UW32 110 aa8.69□□□□□ -1.02
SENP3-208ENST00000583277 FAM240AA0A1B0GVK7 77 aa8.68□□□□□ -1.02
SENP3-208ENST00000583277 A0A087X002 238 aa8.67□□□□□ -1.02
SENP3-208ENST00000583277 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
SENP3-208ENST00000583277 ACYP1P07311 99 aa8.66□□□□□ -1.02
SENP3-208ENST00000583277 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
SENP3-208ENST00000583277 A0A1B0GW54 56 aa8.65□□□□□ -1.02
SENP3-208ENST00000583277 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.03
SENP3-208ENST00000583277 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
SENP3-208ENST00000583277 Q6Q795 121 aa8.64□□□□□ -1.03
SENP3-208ENST00000583277 A0A0G2JQZ4 141 aa8.61□□□□□ -1.03
SENP3-208ENST00000583277 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
SENP3-208ENST00000583277 CD164Q04900 197 aa8.6□□□□□ -1.03
SENP3-208ENST00000583277 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
SENP3-208ENST00000583277 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
SENP3-208ENST00000583277 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
SENP3-208ENST00000583277 HERC2O95714 4834 aa8.56□□□□□ -1.04
SENP3-208ENST00000583277 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
SENP3-208ENST00000583277 A0A087WSZ3 146 aa8.55□□□□□ -1.04
SENP3-208ENST00000583277 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
SENP3-208ENST00000583277 PCLOQ9Y6V0 5065 aa8.54□□□□□ -1.04
SENP3-208ENST00000583277 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
SENP3-208ENST00000583277 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
SENP3-208ENST00000583277 SS18L2Q9UHA2 77 aa8.54□□□□□ -1.04
SENP3-208ENST00000583277 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.04
SENP3-208ENST00000583277 SPAG11AQ6PDA7 123 aa8.52□□□□□ -1.05
SENP3-208ENST00000583277 CDIP1Q9H305 208 aa8.52□□□□□ -1.05
SENP3-208ENST00000583277 NREPQ16612 68 aa8.51□□□□□ -1.05
SENP3-208ENST00000583277 Q6ZVQ6 151 aa8.51□□□□□ -1.05
SENP3-208ENST00000583277 SPINK1P00995 79 aa8.5□□□□□ -1.05
SENP3-208ENST00000583277 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
SENP3-208ENST00000583277 LRP1Q07954 4544 aaKnown RBP8.49□□□□□ -1.05
SENP3-208ENST00000583277 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SENP3-208ENST00000583277 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
SENP3-208ENST00000583277 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
SENP3-208ENST00000583277 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
SENP3-208ENST00000583277 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
SENP3-208ENST00000583277 Q5XG85 94 aa8.48□□□□□ -1.05
SENP3-208ENST00000583277 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SENP3-208ENST00000583277 OXTP01178 125 aa8.47□□□□□ -1.05
SENP3-208ENST00000583277 TNXBP22105 4242 aa8.46□□□□□ -1.05
SENP3-208ENST00000583277 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
SENP3-208ENST00000583277 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
SENP3-208ENST00000583277 BPY2O14599 106 aa8.42□□□□□ -1.06
SENP3-208ENST00000583277 CXCL6P80162 114 aa8.42□□□□□ -1.06
SENP3-208ENST00000583277 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
SENP3-208ENST00000583277 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
SENP3-208ENST00000583277 J3KT08 172 aa8.4□□□□□ -1.06
SENP3-208ENST00000583277 SIGMAR1Q99720 223 aa8.4□□□□□ -1.06
SENP3-208ENST00000583277 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
SENP3-208ENST00000583277 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
SENP3-208ENST00000583277 Q96NJ1 140 aa8.39□□□□□ -1.07
SENP3-208ENST00000583277 IGKV3D-7A0A0C4DH55 119 aa8.38□□□□□ -1.07
SENP3-208ENST00000583277 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
SENP3-208ENST00000583277 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
SENP3-208ENST00000583277 DMBT1Q9UGM3 2413 aaPredicted RBP8.36□□□□□ -1.07
SENP3-208ENST00000583277 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
SENP3-208ENST00000583277 DEFB116Q30KQ4 102 aa8.35□□□□□ -1.07
SENP3-208ENST00000583277 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
SENP3-208ENST00000583277 A8MWP4 228 aa8.33□□□□□ -1.08
SENP3-208ENST00000583277 DSCR10P59022 87 aa8.33□□□□□ -1.08
SENP3-208ENST00000583277 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
SENP3-208ENST00000583277 NDUFB1O75438 58 aa8.31□□□□□ -1.08
SENP3-208ENST00000583277 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms