RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 HIGD2AQ9BW72 106 aa7.75□□□□□ -1.17
SRSF1-204ENST00000581979 H0Y9J4 135 aa7.75□□□□□ -1.17
SRSF1-204ENST00000581979 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
SRSF1-204ENST00000581979 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
SRSF1-204ENST00000581979 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SRSF1-204ENST00000581979 ST20-AS1Q8NBB2 130 aa7.74□□□□□ -1.17
SRSF1-204ENST00000581979 PSORS1C2Q9UIG4 136 aa7.74□□□□□ -1.17
SRSF1-204ENST00000581979 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
SRSF1-204ENST00000581979 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
SRSF1-204ENST00000581979 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
SRSF1-204ENST00000581979 J3QL48 77 aa7.72□□□□□ -1.17
SRSF1-204ENST00000581979 OBSCN-AS1Q96MR7 158 aa7.72□□□□□ -1.17
SRSF1-204ENST00000581979 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.18
SRSF1-204ENST00000581979 NDUFV3P56181 108 aaKnown RBP7.7□□□□□ -1.18
SRSF1-204ENST00000581979 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
SRSF1-204ENST00000581979 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
SRSF1-204ENST00000581979 Q8N377 158 aa7.7□□□□□ -1.18
SRSF1-204ENST00000581979 IGLV5-48A0A075B6I7 105 aa7.69□□□□□ -1.18
SRSF1-204ENST00000581979 RBM3P98179 157 aaKnown RBP7.69□□□□□ -1.18
SRSF1-204ENST00000581979 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
SRSF1-204ENST00000581979 ZNF861PO60384 105 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 OXTP01178 125 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 GAGE2AQ6NT46 116 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 C3orf22Q8N5N4 141 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
SRSF1-204ENST00000581979 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
SRSF1-204ENST00000581979 F8WEM9 126 aa7.63□□□□□ -1.19
SRSF1-204ENST00000581979 VPS25Q9BRG1 176 aa7.63□□□□□ -1.19
SRSF1-204ENST00000581979 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
SRSF1-204ENST00000581979 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
SRSF1-204ENST00000581979 CCKP06307 115 aa7.62□□□□□ -1.19
SRSF1-204ENST00000581979 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
SRSF1-204ENST00000581979 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
SRSF1-204ENST00000581979 FAM240AA0A1B0GVK7 77 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 ACYP1P07311 99 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 PDE6GP18545 87 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 SPRR1BP22528 89 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 Q6ZQT0 140 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 SPRR4Q96PI1 79 aa7.61□□□□□ -1.19
SRSF1-204ENST00000581979 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
SRSF1-204ENST00000581979 CDIP1Q9H305 208 aa7.57□□□□□ -1.2
SRSF1-204ENST00000581979 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
SRSF1-204ENST00000581979 IGLV8-61A0A075B6I0 122 aa7.54□□□□□ -1.2
SRSF1-204ENST00000581979 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
SRSF1-204ENST00000581979 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
SRSF1-204ENST00000581979 MT1HL1P0DM35 61 aa7.53□□□□□ -1.2
SRSF1-204ENST00000581979 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.2
SRSF1-204ENST00000581979 IGFL1Q6UW32 110 aa7.52□□□□□ -1.2
SRSF1-204ENST00000581979 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.2
SRSF1-204ENST00000581979 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
SRSF1-204ENST00000581979 Q6JHZ5 121 aa7.51□□□□□ -1.21
SRSF1-204ENST00000581979 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
SRSF1-204ENST00000581979 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
SRSF1-204ENST00000581979 Q8NBF4 154 aa7.5□□□□□ -1.21
SRSF1-204ENST00000581979 UBL5Q9BZL1 73 aa7.49□□□□□ -1.21
SRSF1-204ENST00000581979 MOBPQ13875 183 aa7.48□□□□□ -1.21
SRSF1-204ENST00000581979 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
SRSF1-204ENST00000581979 SPINK6Q6UWN8 80 aa7.47□□□□□ -1.21
SRSF1-204ENST00000581979 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
SRSF1-204ENST00000581979 A0A1B0GW54 56 aa7.47□□□□□ -1.21
SRSF1-204ENST00000581979 MT-ATP8P03928 68 aa7.47□□□□□ -1.21
SRSF1-204ENST00000581979 Q6ZVQ6 151 aa7.45□□□□□ -1.22
SRSF1-204ENST00000581979 CRYGAP11844 174 aa7.44□□□□□ -1.22
SRSF1-204ENST00000581979 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
SRSF1-204ENST00000581979 TNXBP22105 4242 aa7.43□□□□□ -1.22
SRSF1-204ENST00000581979 NREPQ16612 68 aa7.43□□□□□ -1.22
SRSF1-204ENST00000581979 Q6Q795 121 aa7.43□□□□□ -1.22
SRSF1-204ENST00000581979 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
SRSF1-204ENST00000581979 A0A087WSZ3 146 aa7.41□□□□□ -1.22
SRSF1-204ENST00000581979 A0A087X002 238 aa7.41□□□□□ -1.22
SRSF1-204ENST00000581979 IGKV3D-7A0A0C4DH55 119 aa7.41□□□□□ -1.22
SRSF1-204ENST00000581979 HRCT1Q6UXD1 115 aa7.41□□□□□ -1.22
SRSF1-204ENST00000581979 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
SRSF1-204ENST00000581979 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.23
SRSF1-204ENST00000581979 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.23
SRSF1-204ENST00000581979 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
SRSF1-204ENST00000581979 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
SRSF1-204ENST00000581979 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
SRSF1-204ENST00000581979 BPY2O14599 106 aa7.35□□□□□ -1.23
SRSF1-204ENST00000581979 CXCL6P80162 114 aa7.35□□□□□ -1.23
SRSF1-204ENST00000581979 IMUPQ9GZP8 106 aa7.35□□□□□ -1.23
SRSF1-204ENST00000581979 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
SRSF1-204ENST00000581979 TYMSOSQ8TAI1 123 aa7.34□□□□□ -1.23
SRSF1-204ENST00000581979 CD164Q04900 197 aa7.33□□□□□ -1.24
SRSF1-204ENST00000581979 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
SRSF1-204ENST00000581979 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
SRSF1-204ENST00000581979 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
SRSF1-204ENST00000581979 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
SRSF1-204ENST00000581979 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
SRSF1-204ENST00000581979 LRP2P98164 4655 aa7.29□□□□□ -1.24
SRSF1-204ENST00000581979 A0A087WVE0 104 aa7.28□□□□□ -1.24
SRSF1-204ENST00000581979 Q8N9L7 120 aa7.27□□□□□ -1.25
SRSF1-204ENST00000581979 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
SRSF1-204ENST00000581979 DSCR10P59022 87 aa7.26□□□□□ -1.25
SRSF1-204ENST00000581979 FAM236AA0A1B0GUQ0 79 aa7.25□□□□□ -1.25
SRSF1-204ENST00000581979 FAM236BA0A1B0GV22 79 aa7.25□□□□□ -1.25
SRSF1-204ENST00000581979 J3KT08 172 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms