RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 EPPK1P58107 5090 aaKnown RBP-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 CEBPZOSA8MTT3 80 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 H0YGG7 62 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 SPRR2AP35326 72 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 ATP5EP2Q5VTU8 51 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 LRRK2Q5S007 2527 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 TNRC18O15417 2968 aaPredicted RBP-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 HIVEP1P15822 2718 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 RICTORQ6R327 1708 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 PARP4Q9UKK3 1724 aaKnown RBP-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 RNF17Q9BXT8 1623 aaKnown RBP-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 USH2AO75445 5202 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 DSPP15924 2871 aaKnown RBP-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 LRRIQ1Q96JM4 1722 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 FLGP20930 4061 aaPredicted RBP-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 C3orf79P0CE67 100 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 WFDC13Q8IUB5 93 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 WFDC9Q8NEX5 89 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 SVEP1Q4LDE5 3571 aa-0.06□□□□□ -2.42
SMCHD1-206ENST00000581631 MTORP42345 2549 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 ACACAQ13085 2346 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 NCOA2Q15596 1464 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 TRAV21A0A0B4J279 112 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 ADIRFQ15847 76 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 S100A13Q99584 98 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 ST20Q9HBF5 79 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 PKHD1P08F94 4074 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 SONP18583 2426 aaKnown RBP-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 NRAPQ86VF7 1730 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 AKAP9Q99996 3911 aa-0.07□□□□□ -2.42
SMCHD1-206ENST00000581631 ARHGAP35Q9NRY4 1499 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 ANKRD36CQ5JPF3 1778 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 LCE6AA0A183 80 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 UMAD1C9J7I0 102 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 IFI27P40305 119 aaPredicted RBP-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 ANKRD50Q9ULJ7 1429 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 ABCA8O94911 1581 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 INO80Q9ULG1 1556 aaPredicted RBP-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 LYSTQ99698 3801 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 MAP3K1Q13233 1512 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 HERC1Q15751 4861 aa-0.08□□□□□ -2.42
SMCHD1-206ENST00000581631 PKD1P98161 4303 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 GCN1Q92616 2671 aaKnown RBP-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 ERVK-7P63135 1459 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 TACC2O95359 2948 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 NBEAQ8NFP9 2946 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 PKD1L2Q7Z442 2459 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 HFM1A2PYH4 1435 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 ANKARQ7Z5J8 1434 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 MRPL33O75394 65 aaKnown RBP-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 NDUFA3O95167 84 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 DEFB121Q5J5C9 76 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 PRO3102Q9H379 93 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 KIAA0586Q9BVV6 1533 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 MYO18BQ8IUG5 2567 aa-0.09□□□□□ -2.42
SMCHD1-206ENST00000581631 RALGAPBQ86X10 1494 aa-0.1□□□□□ -2.42
SMCHD1-206ENST00000581631 MYO5CQ9NQX4 1742 aa-0.1□□□□□ -2.42
SMCHD1-206ENST00000581631 DMXL1Q9Y485 3027 aa-0.1□□□□□ -2.42
SMCHD1-206ENST00000581631 C3P01024 1663 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 C9orf92A6NGG3 77 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 LYNX1G3V0Z9 82 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 SPRR2EP22531 72 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 KRTAP20-1Q3LI63 56 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 LELP1Q5T871 98 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 NBEAL2Q6ZNJ1 2754 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 MROH1Q8NDA8 1641 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 NBPF19A0A087WUL8 3843 aa-0.1□□□□□ -2.43
SMCHD1-206ENST00000581631 CUBNO60494 3623 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 FAT3Q8TDW7 4589 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 FASNP49327 2511 aaKnown RBP-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 KALRNO60229 2985 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 RRBP1Q9P2E9 1410 aaKnown RBP-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 LAMA1P25391 3075 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 DNAH6Q9C0G6 4158 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 A0A087WXM4 84 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 DEFB131BA0A096LNP1 70 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 NDUFA4O00483 81 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 LINC00158P58513 81 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 NREPQ16612 68 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 TDRG1Q3Y452 100 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 CD163L1Q9NR16 1453 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 CCDC168Q8NDH2 2452 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 ITSN2Q9NZM3 1697 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 ITPR3Q14573 2671 aa-0.11□□□□□ -2.43
SMCHD1-206ENST00000581631 LMTK2Q8IWU2 1503 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 RELNP78509 3460 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 DNAH3Q8TD57 4116 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 MADDQ8WXG6 1647 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 IFI6P09912 130 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 KIF1AQ12756 1690 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 VPS13BQ7Z7G8 4022 aa-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
SMCHD1-206ENST00000581631 DNAH9Q9NYC9 4486 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 RIF1Q5UIP0 2472 aaKnown RBP-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 DIP2AQ14689 1571 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 CDC42BPGQ6DT37 1551 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms