RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
ITGB4-207ENST00000580542 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
ITGB4-207ENST00000580542 A0A1B0GW54 56 aa8.88□□□□□ -0.99
ITGB4-207ENST00000580542 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
ITGB4-207ENST00000580542 VPREB1P12018 145 aa8.87□□□□□ -0.99
ITGB4-207ENST00000580542 HUWE1Q7Z6Z7 4374 aaKnown RBP8.86□□□□□ -0.99
ITGB4-207ENST00000580542 WFDC10BQ8IUB3 73 aa8.86□□□□□ -0.99
ITGB4-207ENST00000580542 LELP1Q5T871 98 aa8.85□□□□□ -0.99
ITGB4-207ENST00000580542 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
ITGB4-207ENST00000580542 HTN3P15516 51 aa8.85□□□□□ -0.99
ITGB4-207ENST00000580542 COA5Q86WW8 74 aa8.84□□□□□ -0.99
ITGB4-207ENST00000580542 Q8NBF4 154 aa8.84□□□□□ -0.99
ITGB4-207ENST00000580542 NOTCH1P46531 2555 aa8.84□□□□□ -0.99
ITGB4-207ENST00000580542 GVQW2A0A096LPI5 108 aaPredicted RBP8.84□□□□□ -1
ITGB4-207ENST00000580542 H0Y9P7 68 aa8.83□□□□□ -1
ITGB4-207ENST00000580542 K7EIL1 84 aa8.83□□□□□ -1
ITGB4-207ENST00000580542 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
ITGB4-207ENST00000580542 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
ITGB4-207ENST00000580542 PRAC1Q96KF2 57 aa8.81□□□□□ -1
ITGB4-207ENST00000580542 LINC00313P59037 77 aa8.81□□□□□ -1
ITGB4-207ENST00000580542 DNHD1Q96M86 4753 aa8.8□□□□□ -1
ITGB4-207ENST00000580542 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
ITGB4-207ENST00000580542 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
ITGB4-207ENST00000580542 TENM3Q9P273 2699 aa8.79□□□□□ -1
ITGB4-207ENST00000580542 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
ITGB4-207ENST00000580542 SPRR4Q96PI1 79 aa8.78□□□□□ -1
ITGB4-207ENST00000580542 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
ITGB4-207ENST00000580542 SPINK7P58062 85 aa8.77□□□□□ -1.01
ITGB4-207ENST00000580542 IGKV2D-24A0A075B6R9 120 aa8.77□□□□□ -1.01
ITGB4-207ENST00000580542 H3BPC8 53 aa8.76□□□□□ -1.01
ITGB4-207ENST00000580542 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
ITGB4-207ENST00000580542 LINC01554Q52M75 96 aa8.76□□□□□ -1.01
ITGB4-207ENST00000580542 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
ITGB4-207ENST00000580542 H3BNG1 76 aa8.75□□□□□ -1.01
ITGB4-207ENST00000580542 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
ITGB4-207ENST00000580542 TNP2Q05952 138 aa8.73□□□□□ -1.01
ITGB4-207ENST00000580542 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
ITGB4-207ENST00000580542 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
ITGB4-207ENST00000580542 DYNC2H1Q8NCM8 4307 aaKnown RBP8.73□□□□□ -1.01
ITGB4-207ENST00000580542 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
ITGB4-207ENST00000580542 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.01
ITGB4-207ENST00000580542 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
ITGB4-207ENST00000580542 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
ITGB4-207ENST00000580542 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
ITGB4-207ENST00000580542 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
ITGB4-207ENST00000580542 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
ITGB4-207ENST00000580542 A0A1W2PNN7 141 aa8.69□□□□□ -1.02
ITGB4-207ENST00000580542 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
ITGB4-207ENST00000580542 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
ITGB4-207ENST00000580542 Q6ZRX8 168 aa8.67□□□□□ -1.02
ITGB4-207ENST00000580542 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
ITGB4-207ENST00000580542 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
ITGB4-207ENST00000580542 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
ITGB4-207ENST00000580542 RPL37AP8A6NKH3 93 aa8.66□□□□□ -1.02
ITGB4-207ENST00000580542 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
ITGB4-207ENST00000580542 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.03
ITGB4-207ENST00000580542 DNAH7Q8WXX0 4024 aa8.65□□□□□ -1.03
ITGB4-207ENST00000580542 A0A087WSZ3 146 aa8.64□□□□□ -1.03
ITGB4-207ENST00000580542 DEFB131BA0A096LNP1 70 aa8.63□□□□□ -1.03
ITGB4-207ENST00000580542 MEGF8Q7Z7M0 2845 aa8.62□□□□□ -1.03
ITGB4-207ENST00000580542 CNBPP62633 177 aaKnown RBP8.61□□□□□ -1.03
ITGB4-207ENST00000580542 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
ITGB4-207ENST00000580542 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
ITGB4-207ENST00000580542 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
ITGB4-207ENST00000580542 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
ITGB4-207ENST00000580542 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
ITGB4-207ENST00000580542 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
ITGB4-207ENST00000580542 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
ITGB4-207ENST00000580542 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
ITGB4-207ENST00000580542 CSMD3Q7Z407 3707 aa8.55□□□□□ -1.04
ITGB4-207ENST00000580542 HRES1P13985 223 aa8.55□□□□□ -1.04
ITGB4-207ENST00000580542 A8MWP4 228 aa8.52□□□□□ -1.05
ITGB4-207ENST00000580542 PLECQ15149 4684 aaKnown RBP8.52□□□□□ -1.05
ITGB4-207ENST00000580542 H0Y9J4 135 aa8.51□□□□□ -1.05
ITGB4-207ENST00000580542 RETNLBQ9BQ08 111 aa8.51□□□□□ -1.05
ITGB4-207ENST00000580542 FAM168BA1KXE4 195 aa8.51□□□□□ -1.05
ITGB4-207ENST00000580542 DNAH10OSP0CZ25 163 aa8.5□□□□□ -1.05
ITGB4-207ENST00000580542 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
ITGB4-207ENST00000580542 SPRR1AP35321 89 aa8.5□□□□□ -1.05
ITGB4-207ENST00000580542 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
ITGB4-207ENST00000580542 LYSTQ99698 3801 aa8.49□□□□□ -1.05
ITGB4-207ENST00000580542 CASC10Q5T4H9 136 aa8.48□□□□□ -1.05
ITGB4-207ENST00000580542 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
ITGB4-207ENST00000580542 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
ITGB4-207ENST00000580542 STARD9Q9P2P6 4700 aa8.48□□□□□ -1.05
ITGB4-207ENST00000580542 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
ITGB4-207ENST00000580542 APLNQ9ULZ1 77 aa8.46□□□□□ -1.05
ITGB4-207ENST00000580542 RTL8CO15255 209 aa8.46□□□□□ -1.06
ITGB4-207ENST00000580542 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
ITGB4-207ENST00000580542 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
ITGB4-207ENST00000580542 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
ITGB4-207ENST00000580542 FBN3Q75N90 2809 aa8.44□□□□□ -1.06
ITGB4-207ENST00000580542 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
ITGB4-207ENST00000580542 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
ITGB4-207ENST00000580542 TP53AIP1Q9HCN2 124 aa8.42□□□□□ -1.06
ITGB4-207ENST00000580542 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
ITGB4-207ENST00000580542 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
ITGB4-207ENST00000580542 Q6ZR54 194 aa8.39□□□□□ -1.07
ITGB4-207ENST00000580542 PRLHP81277 87 aa8.38□□□□□ -1.07
ITGB4-207ENST00000580542 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms