RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 C21orf62-AS1Q17RA5 79 aa10.51□□□□□ -0.73
SREBF1-218ENST00000578469 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-218ENST00000578469 ST20-AS1Q8NBB2 130 aa10.5□□□□□ -0.73
SREBF1-218ENST00000578469 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
SREBF1-218ENST00000578469 Q6ZQT0 140 aa10.46□□□□□ -0.73
SREBF1-218ENST00000578469 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
SREBF1-218ENST00000578469 KRTAP10-1P60331 282 aa10.44□□□□□ -0.74
SREBF1-218ENST00000578469 KRTAP13-1Q8IUC0 172 aa10.44□□□□□ -0.74
SREBF1-218ENST00000578469 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
SREBF1-218ENST00000578469 Q6ZSA8 131 aa10.43□□□□□ -0.74
SREBF1-218ENST00000578469 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
SREBF1-218ENST00000578469 F8WEM9 126 aa10.42□□□□□ -0.74
SREBF1-218ENST00000578469 C1orf137Q5JT78 98 aa10.42□□□□□ -0.74
SREBF1-218ENST00000578469 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
SREBF1-218ENST00000578469 XGP55808 180 aa10.41□□□□□ -0.74
SREBF1-218ENST00000578469 Q5VSD8 79 aa10.4□□□□□ -0.74
SREBF1-218ENST00000578469 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
SREBF1-218ENST00000578469 SPRR1BP22528 89 aa10.39□□□□□ -0.75
SREBF1-218ENST00000578469 SCXQ7RTU7 201 aa10.39□□□□□ -0.75
SREBF1-218ENST00000578469 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
SREBF1-218ENST00000578469 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
SREBF1-218ENST00000578469 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
SREBF1-218ENST00000578469 ZNF706Q9Y5V0 76 aaPredicted RBP10.38□□□□□ -0.75
SREBF1-218ENST00000578469 FAT1Q14517 4588 aa10.38□□□□□ -0.75
SREBF1-218ENST00000578469 MYCBP2O75592 4640 aa10.37□□□□□ -0.75
SREBF1-218ENST00000578469 ZNF861PO60384 105 aa10.37□□□□□ -0.75
SREBF1-218ENST00000578469 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
SREBF1-218ENST00000578469 SMIM29Q86T20 159 aa10.37□□□□□ -0.75
SREBF1-218ENST00000578469 VPS13BQ7Z7G8 4022 aa10.36□□□□□ -0.75
SREBF1-218ENST00000578469 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
SREBF1-218ENST00000578469 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
SREBF1-218ENST00000578469 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
SREBF1-218ENST00000578469 A0A1B0GW54 56 aa10.32□□□□□ -0.76
SREBF1-218ENST00000578469 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
SREBF1-218ENST00000578469 SRRM2Q9UQ35 2752 aaKnown RBP10.31□□□□□ -0.76
SREBF1-218ENST00000578469 IGLV8-61A0A075B6I0 122 aa10.31□□□□□ -0.76
SREBF1-218ENST00000578469 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
SREBF1-218ENST00000578469 Q6JHZ5 121 aa10.3□□□□□ -0.76
SREBF1-218ENST00000578469 J3QL48 77 aa10.29□□□□□ -0.76
SREBF1-218ENST00000578469 SCGB1A1P11684 91 aa10.29□□□□□ -0.76
SREBF1-218ENST00000578469 Q8NBF4 154 aa10.29□□□□□ -0.76
SREBF1-218ENST00000578469 LINC00483Q53H64 154 aa10.28□□□□□ -0.76
SREBF1-218ENST00000578469 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
SREBF1-218ENST00000578469 HAMPP81172 84 aa10.27□□□□□ -0.77
SREBF1-218ENST00000578469 ATP5EP2Q5VTU8 51 aa10.27□□□□□ -0.77
SREBF1-218ENST00000578469 Q6Q795 121 aa10.27□□□□□ -0.77
SREBF1-218ENST00000578469 TRBV7-7A0A0K0K1E9 115 aa10.26□□□□□ -0.77
SREBF1-218ENST00000578469 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
SREBF1-218ENST00000578469 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
SREBF1-218ENST00000578469 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
SREBF1-218ENST00000578469 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SREBF1-218ENST00000578469 IGKV3D-7A0A0C4DH55 119 aa10.23□□□□□ -0.77
SREBF1-218ENST00000578469 NREPQ16612 68 aa10.22□□□□□ -0.77
SREBF1-218ENST00000578469 CRYGAP11844 174 aa10.21□□□□□ -0.77
SREBF1-218ENST00000578469 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.77
SREBF1-218ENST00000578469 C9orf153Q5TBE3 101 aa10.2□□□□□ -0.78
SREBF1-218ENST00000578469 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
SREBF1-218ENST00000578469 PLA2G1BP04054 148 aaKnown RBP10.17□□□□□ -0.78
SREBF1-218ENST00000578469 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
SREBF1-218ENST00000578469 CXCL6P80162 114 aa10.16□□□□□ -0.78
SREBF1-218ENST00000578469 HIST1H4AP62805 103 aaKnown RBP10.13□□□□□ -0.79
SREBF1-218ENST00000578469 MOBPQ13875 183 aa10.13□□□□□ -0.79
SREBF1-218ENST00000578469 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
SREBF1-218ENST00000578469 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-218ENST00000578469 PCP4P48539 62 aa10.12□□□□□ -0.79
SREBF1-218ENST00000578469 A0A087WSZ3 146 aa10.11□□□□□ -0.79
SREBF1-218ENST00000578469 BPY2O14599 106 aa10.11□□□□□ -0.79
SREBF1-218ENST00000578469 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
SREBF1-218ENST00000578469 SSBP3-AS1Q7Z2R9 100 aa10.08□□□□□ -0.8
SREBF1-218ENST00000578469 HMCN2Q8NDA2 5059 aa10.06□□□□□ -0.8
SREBF1-218ENST00000578469 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
SREBF1-218ENST00000578469 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
SREBF1-218ENST00000578469 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
SREBF1-218ENST00000578469 A0A087WVE0 104 aa10.03□□□□□ -0.8
SREBF1-218ENST00000578469 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
SREBF1-218ENST00000578469 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
SREBF1-218ENST00000578469 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
SREBF1-218ENST00000578469 ANAPC13Q9BS18 74 aa10.01□□□□□ -0.81
SREBF1-218ENST00000578469 CD164Q04900 197 aa10□□□□□ -0.81
SREBF1-218ENST00000578469 OXTP01178 125 aa9.99□□□□□ -0.81
SREBF1-218ENST00000578469 ATOX1O00244 68 aa9.98□□□□□ -0.81
SREBF1-218ENST00000578469 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
SREBF1-218ENST00000578469 A0A087X002 238 aa9.97□□□□□ -0.81
SREBF1-218ENST00000578469 J3KT08 172 aa9.97□□□□□ -0.81
SREBF1-218ENST00000578469 LRP1Q07954 4544 aaKnown RBP9.97□□□□□ -0.81
SREBF1-218ENST00000578469 IGKV4-1P06312 121 aa9.96□□□□□ -0.82
SREBF1-218ENST00000578469 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
SREBF1-218ENST00000578469 DSCR10P59022 87 aa9.95□□□□□ -0.82
SREBF1-218ENST00000578469 KRTAP13-2Q52LG2 175 aa9.95□□□□□ -0.82
SREBF1-218ENST00000578469 Q8N9L7 120 aa9.95□□□□□ -0.82
SREBF1-218ENST00000578469 DEFB116Q30KQ4 102 aa9.94□□□□□ -0.82
SREBF1-218ENST00000578469 FAT3Q8TDW7 4589 aa9.94□□□□□ -0.82
SREBF1-218ENST00000578469 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
SREBF1-218ENST00000578469 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
SREBF1-218ENST00000578469 K7EQZ3 153 aa9.89□□□□□ -0.83
SREBF1-218ENST00000578469 A8MWP4 228 aa9.88□□□□□ -0.83
SREBF1-218ENST00000578469 NDUFB1O75438 58 aa9.88□□□□□ -0.83
SREBF1-218ENST00000578469 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
SREBF1-218ENST00000578469 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
SREBF1-218ENST00000578469 Q96NJ1 140 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms