RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
SRSF1-202ENST00000578430 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
SRSF1-202ENST00000578430 ANKRD29Q8N6D5 301 aa8.18□□□□□ -1.1
SRSF1-202ENST00000578430 ZNF706Q9Y5V0 76 aaPredicted RBP8.18□□□□□ -1.1
SRSF1-202ENST00000578430 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
SRSF1-202ENST00000578430 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
SRSF1-202ENST00000578430 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
SRSF1-202ENST00000578430 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
SRSF1-202ENST00000578430 MTURNQ8N3F0 131 aa8.15□□□□□ -1.1
SRSF1-202ENST00000578430 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
SRSF1-202ENST00000578430 SPRR1BP22528 89 aa8.14□□□□□ -1.11
SRSF1-202ENST00000578430 Q8N377 158 aa8.14□□□□□ -1.11
SRSF1-202ENST00000578430 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
SRSF1-202ENST00000578430 HERC1Q15751 4861 aa8.14□□□□□ -1.11
SRSF1-202ENST00000578430 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
SRSF1-202ENST00000578430 DEFB105AQ8NG35 78 aa8.13□□□□□ -1.11
SRSF1-202ENST00000578430 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
SRSF1-202ENST00000578430 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
SRSF1-202ENST00000578430 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
SRSF1-202ENST00000578430 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
SRSF1-202ENST00000578430 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
SRSF1-202ENST00000578430 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
SRSF1-202ENST00000578430 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
SRSF1-202ENST00000578430 Q8N1X5 172 aa8.1□□□□□ -1.11
SRSF1-202ENST00000578430 SRRM2Q9UQ35 2752 aaKnown RBP8.09□□□□□ -1.11
SRSF1-202ENST00000578430 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
SRSF1-202ENST00000578430 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
SRSF1-202ENST00000578430 FAT1Q14517 4588 aa8.08□□□□□ -1.12
SRSF1-202ENST00000578430 F8WEM9 126 aa8.07□□□□□ -1.12
SRSF1-202ENST00000578430 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
SRSF1-202ENST00000578430 SMIM29Q86T20 159 aa8.07□□□□□ -1.12
SRSF1-202ENST00000578430 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
SRSF1-202ENST00000578430 KRTAP4-12Q9BQ66 201 aa8.07□□□□□ -1.12
SRSF1-202ENST00000578430 Q5VSD8 79 aa8.06□□□□□ -1.12
SRSF1-202ENST00000578430 RBM3P98179 157 aaKnown RBP8.05□□□□□ -1.12
SRSF1-202ENST00000578430 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
SRSF1-202ENST00000578430 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
SRSF1-202ENST00000578430 LCE3BQ5TA77 95 aa8.04□□□□□ -1.12
SRSF1-202ENST00000578430 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
SRSF1-202ENST00000578430 PDE6GP18545 87 aa8.03□□□□□ -1.12
SRSF1-202ENST00000578430 C3orf22Q8N5N4 141 aa8.03□□□□□ -1.12
SRSF1-202ENST00000578430 DSCR8Q96T75 97 aa8.02□□□□□ -1.13
SRSF1-202ENST00000578430 Q6JHZ5 121 aa8.01□□□□□ -1.13
SRSF1-202ENST00000578430 LOC110117498A0A087WWA1 95 aa8□□□□□ -1.13
SRSF1-202ENST00000578430 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
SRSF1-202ENST00000578430 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
SRSF1-202ENST00000578430 CRYGAP11844 174 aa7.99□□□□□ -1.13
SRSF1-202ENST00000578430 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
SRSF1-202ENST00000578430 Q8NBF4 154 aa7.98□□□□□ -1.13
SRSF1-202ENST00000578430 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
SRSF1-202ENST00000578430 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
SRSF1-202ENST00000578430 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
SRSF1-202ENST00000578430 A0A1B0GV72 72 aa7.97□□□□□ -1.13
SRSF1-202ENST00000578430 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
SRSF1-202ENST00000578430 SSBP3-AS1Q7Z2R9 100 aa7.97□□□□□ -1.13
SRSF1-202ENST00000578430 J3QR89 54 aa7.96□□□□□ -1.14
SRSF1-202ENST00000578430 Q6ZQT0 140 aa7.96□□□□□ -1.14
SRSF1-202ENST00000578430 MYCBP2O75592 4640 aa7.95□□□□□ -1.14
SRSF1-202ENST00000578430 MOBPQ13875 183 aa7.95□□□□□ -1.14
SRSF1-202ENST00000578430 DMBT1Q9UGM3 2413 aaPredicted RBP7.95□□□□□ -1.14
SRSF1-202ENST00000578430 CCKP06307 115 aa7.94□□□□□ -1.14
SRSF1-202ENST00000578430 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
SRSF1-202ENST00000578430 A0A087X002 238 aa7.93□□□□□ -1.14
SRSF1-202ENST00000578430 A0A1B0GW54 56 aa7.93□□□□□ -1.14
SRSF1-202ENST00000578430 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
SRSF1-202ENST00000578430 K7ERU9 68 aa7.91□□□□□ -1.14
SRSF1-202ENST00000578430 Q6Q795 121 aa7.91□□□□□ -1.14
SRSF1-202ENST00000578430 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
SRSF1-202ENST00000578430 ACYP1P07311 99 aa7.9□□□□□ -1.14
SRSF1-202ENST00000578430 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
SRSF1-202ENST00000578430 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
SRSF1-202ENST00000578430 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
SRSF1-202ENST00000578430 CD164Q04900 197 aa7.89□□□□□ -1.15
SRSF1-202ENST00000578430 FLG2Q5D862 2391 aaPredicted RBP7.89□□□□□ -1.15
SRSF1-202ENST00000578430 PRR26Q8N8Z3 221 aa7.88□□□□□ -1.15
SRSF1-202ENST00000578430 VPS25Q9BRG1 176 aa7.88□□□□□ -1.15
SRSF1-202ENST00000578430 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
SRSF1-202ENST00000578430 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
SRSF1-202ENST00000578430 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
SRSF1-202ENST00000578430 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
SRSF1-202ENST00000578430 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
SRSF1-202ENST00000578430 OXTP01178 125 aa7.82□□□□□ -1.16
SRSF1-202ENST00000578430 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
SRSF1-202ENST00000578430 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
SRSF1-202ENST00000578430 SS18L2Q9UHA2 77 aa7.81□□□□□ -1.16
SRSF1-202ENST00000578430 SPINK1P00995 79 aa7.8□□□□□ -1.16
SRSF1-202ENST00000578430 UBL5Q9BZL1 73 aa7.8□□□□□ -1.16
SRSF1-202ENST00000578430 LINC00846Q9NV44 126 aa7.8□□□□□ -1.16
SRSF1-202ENST00000578430 FAT3Q8TDW7 4589 aa7.79□□□□□ -1.16
SRSF1-202ENST00000578430 A0A087WSZ3 146 aa7.79□□□□□ -1.16
SRSF1-202ENST00000578430 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
SRSF1-202ENST00000578430 HRCT1Q6UXD1 115 aa7.79□□□□□ -1.16
SRSF1-202ENST00000578430 Q5XG85 94 aa7.78□□□□□ -1.16
SRSF1-202ENST00000578430 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
SRSF1-202ENST00000578430 NREPQ16612 68 aa7.77□□□□□ -1.17
SRSF1-202ENST00000578430 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
SRSF1-202ENST00000578430 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
SRSF1-202ENST00000578430 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
SRSF1-202ENST00000578430 Q6ZVQ6 151 aa7.75□□□□□ -1.17
SRSF1-202ENST00000578430 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms