RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 SPRR4Q96PI1 79 aa7.24□□□□□ -1.25
GGA3-205ENST00000578348 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
GGA3-205ENST00000578348 A0A0G2JQZ4 141 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 A0A1W2PNN7 141 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 K7EQZ3 153 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 DSCR10P59022 87 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 NBDYA0A0U1RRE5 68 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 PRR15Q8IV56 129 aa7.22□□□□□ -1.25
GGA3-205ENST00000578348 C16orf90A8MZG2 172 aa7.21□□□□□ -1.25
GGA3-205ENST00000578348 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.25
GGA3-205ENST00000578348 DYNC2H1Q8NCM8 4307 aaKnown RBP7.21□□□□□ -1.25
GGA3-205ENST00000578348 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
GGA3-205ENST00000578348 A0A096LNI7 61 aa7.2□□□□□ -1.26
GGA3-205ENST00000578348 PRLHP81277 87 aa7.2□□□□□ -1.26
GGA3-205ENST00000578348 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
GGA3-205ENST00000578348 Q1T7F1 81 aa7.18□□□□□ -1.26
GGA3-205ENST00000578348 IGFL1Q6UW32 110 aa7.18□□□□□ -1.26
GGA3-205ENST00000578348 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.17□□□□□ -1.26
GGA3-205ENST00000578348 LRCOL1A6NCL2 159 aa7.17□□□□□ -1.26
GGA3-205ENST00000578348 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
GGA3-205ENST00000578348 LCE6AA0A183 80 aa7.17□□□□□ -1.26
GGA3-205ENST00000578348 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
GGA3-205ENST00000578348 LYSTQ99698 3801 aa7.17□□□□□ -1.26
GGA3-205ENST00000578348 HCG22E2RYF7 251 aa7.15□□□□□ -1.26
GGA3-205ENST00000578348 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
GGA3-205ENST00000578348 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.27
GGA3-205ENST00000578348 DNAH10Q8IVF4 4471 aa7.14□□□□□ -1.27
GGA3-205ENST00000578348 A0A087WSZ3 146 aa7.14□□□□□ -1.27
GGA3-205ENST00000578348 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
GGA3-205ENST00000578348 UBE2AP49459 152 aa7.11□□□□□ -1.27
GGA3-205ENST00000578348 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
GGA3-205ENST00000578348 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
GGA3-205ENST00000578348 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
GGA3-205ENST00000578348 RPL37AP61513 92 aaKnown RBP7.1□□□□□ -1.27
GGA3-205ENST00000578348 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
GGA3-205ENST00000578348 PHF5AQ7RTV0 110 aaKnown RBP7.1□□□□□ -1.27
GGA3-205ENST00000578348 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
GGA3-205ENST00000578348 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
GGA3-205ENST00000578348 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
GGA3-205ENST00000578348 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
GGA3-205ENST00000578348 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
GGA3-205ENST00000578348 A0A087WTM6 91 aa7.07□□□□□ -1.28
GGA3-205ENST00000578348 PRR4Q16378 134 aa7.07□□□□□ -1.28
GGA3-205ENST00000578348 Q6ZR54 194 aa7.07□□□□□ -1.28
GGA3-205ENST00000578348 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
GGA3-205ENST00000578348 TRAV22A0A0B4J277 110 aa7.06□□□□□ -1.28
GGA3-205ENST00000578348 H0Y9J4 135 aa7.05□□□□□ -1.28
GGA3-205ENST00000578348 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
GGA3-205ENST00000578348 VPS13DQ5THJ4 4388 aa7.05□□□□□ -1.28
GGA3-205ENST00000578348 MEGF8Q7Z7M0 2845 aa7.05□□□□□ -1.28
GGA3-205ENST00000578348 NDUFB1O75438 58 aa7.04□□□□□ -1.28
GGA3-205ENST00000578348 MP68P56378 58 aa7.04□□□□□ -1.28
GGA3-205ENST00000578348 PRKDCP78527 4128 aaKnown RBP7.04□□□□□ -1.28
GGA3-205ENST00000578348 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
GGA3-205ENST00000578348 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
GGA3-205ENST00000578348 PANO1I0J062 215 aa7.03□□□□□ -1.28
GGA3-205ENST00000578348 PSPHP1O15172 72 aa7.03□□□□□ -1.28
GGA3-205ENST00000578348 TENM2Q9NT68 2774 aa7.02□□□□□ -1.28
GGA3-205ENST00000578348 KRTAP29-1A8MX34 341 aaPredicted RBP7.02□□□□□ -1.29
GGA3-205ENST00000578348 CD164Q04900 197 aa7.02□□□□□ -1.29
GGA3-205ENST00000578348 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
GGA3-205ENST00000578348 LINC00208Q96KT6 92 aa7.02□□□□□ -1.29
GGA3-205ENST00000578348 SPRR1BP22528 89 aa7.02□□□□□ -1.29
GGA3-205ENST00000578348 STARD9Q9P2P6 4700 aa7.02□□□□□ -1.29
GGA3-205ENST00000578348 RTL8CO15255 209 aa7.01□□□□□ -1.29
GGA3-205ENST00000578348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
GGA3-205ENST00000578348 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
GGA3-205ENST00000578348 A8MWP4 228 aa6.99□□□□□ -1.29
GGA3-205ENST00000578348 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
GGA3-205ENST00000578348 H0Y9P7 68 aa6.99□□□□□ -1.29
GGA3-205ENST00000578348 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
GGA3-205ENST00000578348 LY6G6CO95867 125 aa6.97□□□□□ -1.29
GGA3-205ENST00000578348 KRTAP13-1Q8IUC0 172 aa6.97□□□□□ -1.29
GGA3-205ENST00000578348 A8MUN3 132 aa6.97□□□□□ -1.29
GGA3-205ENST00000578348 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
GGA3-205ENST00000578348 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
GGA3-205ENST00000578348 Q5VV11 94 aa6.95□□□□□ -1.3
GGA3-205ENST00000578348 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
GGA3-205ENST00000578348 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
GGA3-205ENST00000578348 IGLV9-49A0A0B4J1Y8 123 aa6.94□□□□□ -1.3
GGA3-205ENST00000578348 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
GGA3-205ENST00000578348 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
GGA3-205ENST00000578348 H3BPC8 53 aa6.92□□□□□ -1.3
GGA3-205ENST00000578348 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
GGA3-205ENST00000578348 FBN3Q75N90 2809 aa6.9□□□□□ -1.3
GGA3-205ENST00000578348 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.31
GGA3-205ENST00000578348 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
GGA3-205ENST00000578348 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
GGA3-205ENST00000578348 Q96NJ1 140 aa6.89□□□□□ -1.31
GGA3-205ENST00000578348 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
GGA3-205ENST00000578348 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
GGA3-205ENST00000578348 ATP11AUNQ6ZP68 121 aa6.87□□□□□ -1.31
GGA3-205ENST00000578348 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
GGA3-205ENST00000578348 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
GGA3-205ENST00000578348 A8MU10 97 aa6.86□□□□□ -1.31
GGA3-205ENST00000578348 Q75L30 129 aa6.86□□□□□ -1.31
GGA3-205ENST00000578348 NDUFS5O43920 106 aa6.85□□□□□ -1.31
GGA3-205ENST00000578348 MOBPQ13875 183 aa6.85□□□□□ -1.31
GGA3-205ENST00000578348 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
GGA3-205ENST00000578348 DNAH2Q9P225 4427 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms