RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
CTDNEP1-212ENST00000576613 LST1O00453 97 aa5.92□□□□□ -1.46
CTDNEP1-212ENST00000576613 Q6ZQY7 126 aa5.91□□□□□ -1.46
CTDNEP1-212ENST00000576613 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
CTDNEP1-212ENST00000576613 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
CTDNEP1-212ENST00000576613 C20orf166-AS1Q96NR2 134 aa5.91□□□□□ -1.46
CTDNEP1-212ENST00000576613 MT2AP02795 61 aa5.9□□□□□ -1.46
CTDNEP1-212ENST00000576613 OCIAD2Q56VL3 154 aa5.9□□□□□ -1.46
CTDNEP1-212ENST00000576613 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
CTDNEP1-212ENST00000576613 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
CTDNEP1-212ENST00000576613 COLCA2A8K830 154 aa5.88□□□□□ -1.47
CTDNEP1-212ENST00000576613 A8MUU9 505 aa5.88□□□□□ -1.47
CTDNEP1-212ENST00000576613 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
CTDNEP1-212ENST00000576613 FAM236DA0A1B0GTK5 79 aa5.87□□□□□ -1.47
CTDNEP1-212ENST00000576613 SCGB1D1O95968 90 aa5.87□□□□□ -1.47
CTDNEP1-212ENST00000576613 C3orf79P0CE67 100 aa5.87□□□□□ -1.47
CTDNEP1-212ENST00000576613 FAM236CP0DP71 79 aa5.87□□□□□ -1.47
CTDNEP1-212ENST00000576613 LCE2BO14633 110 aa5.86□□□□□ -1.47
CTDNEP1-212ENST00000576613 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 MT1FP04733 61 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 KRTDAPP60985 99 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
CTDNEP1-212ENST00000576613 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
CTDNEP1-212ENST00000576613 H3BUT2 72 aa5.83□□□□□ -1.48
CTDNEP1-212ENST00000576613 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
CTDNEP1-212ENST00000576613 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
CTDNEP1-212ENST00000576613 ATOH7Q8N100 152 aa5.81□□□□□ -1.48
CTDNEP1-212ENST00000576613 BVES-AS1Q5T3Y7 98 aa5.8□□□□□ -1.48
CTDNEP1-212ENST00000576613 TEN1Q86WV5 123 aa5.8□□□□□ -1.48
CTDNEP1-212ENST00000576613 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-212ENST00000576613 DSCR10P59022 87 aa5.79□□□□□ -1.48
CTDNEP1-212ENST00000576613 A0A087WSZ3 146 aa5.77□□□□□ -1.49
CTDNEP1-212ENST00000576613 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
CTDNEP1-212ENST00000576613 C12orf57Q99622 126 aa5.77□□□□□ -1.49
CTDNEP1-212ENST00000576613 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
CTDNEP1-212ENST00000576613 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
CTDNEP1-212ENST00000576613 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
CTDNEP1-212ENST00000576613 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
CTDNEP1-212ENST00000576613 SNCGO76070 127 aa5.75□□□□□ -1.49
CTDNEP1-212ENST00000576613 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
CTDNEP1-212ENST00000576613 HRES1P13985 223 aa5.74□□□□□ -1.49
CTDNEP1-212ENST00000576613 LINC00313P59037 77 aa5.74□□□□□ -1.49
CTDNEP1-212ENST00000576613 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-212ENST00000576613 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
CTDNEP1-212ENST00000576613 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
CTDNEP1-212ENST00000576613 HSBP1L1C9JCN9 74 aa5.7□□□□□ -1.5
CTDNEP1-212ENST00000576613 H3BMG7 143 aa5.7□□□□□ -1.5
CTDNEP1-212ENST00000576613 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
CTDNEP1-212ENST00000576613 GHRHP01286 108 aa5.69□□□□□ -1.5
CTDNEP1-212ENST00000576613 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CTDNEP1-212ENST00000576613 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
CTDNEP1-212ENST00000576613 H0YGX0 51 aa5.67□□□□□ -1.5
CTDNEP1-212ENST00000576613 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
CTDNEP1-212ENST00000576613 FABP2P12104 132 aa5.65□□□□□ -1.5
CTDNEP1-212ENST00000576613 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
CTDNEP1-212ENST00000576613 RAB37Q96AX2 223 aa5.64□□□□□ -1.51
CTDNEP1-212ENST00000576613 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
CTDNEP1-212ENST00000576613 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
CTDNEP1-212ENST00000576613 TRBV7-4A0A0J9YYF1 115 aa5.63□□□□□ -1.51
CTDNEP1-212ENST00000576613 A8MWP4 228 aa5.63□□□□□ -1.51
CTDNEP1-212ENST00000576613 A0A1B0GX51 115 aa5.62□□□□□ -1.51
CTDNEP1-212ENST00000576613 DEFB116Q30KQ4 102 aa5.61□□□□□ -1.51
CTDNEP1-212ENST00000576613 ANKRD29Q8N6D5 301 aa5.61□□□□□ -1.51
CTDNEP1-212ENST00000576613 A0A0B4J2C4 111 aa5.59□□□□□ -1.51
CTDNEP1-212ENST00000576613 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
CTDNEP1-212ENST00000576613 S100A2P29034 98 aa5.59□□□□□ -1.51
CTDNEP1-212ENST00000576613 SPINK7P58062 85 aa5.59□□□□□ -1.51
CTDNEP1-212ENST00000576613 LINC00472Q9H8W2 130 aa5.59□□□□□ -1.51
CTDNEP1-212ENST00000576613 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-212ENST00000576613 ZCCHC13Q8WW36 166 aaKnown RBP5.58□□□□□ -1.52
CTDNEP1-212ENST00000576613 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
CTDNEP1-212ENST00000576613 TRACP01848 142 aa5.57□□□□□ -1.52
CTDNEP1-212ENST00000576613 A0A1B0GV72 72 aa5.56□□□□□ -1.52
CTDNEP1-212ENST00000576613 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
CTDNEP1-212ENST00000576613 COX8AP10176 69 aa5.56□□□□□ -1.52
CTDNEP1-212ENST00000576613 HIST3H2BBQ8N257 126 aa5.56□□□□□ -1.52
CTDNEP1-212ENST00000576613 H3BQ85 93 aa5.55□□□□□ -1.52
CTDNEP1-212ENST00000576613 DLEU1O43261 78 aa5.55□□□□□ -1.52
CTDNEP1-212ENST00000576613 DNAL4O96015 105 aa5.55□□□□□ -1.52
CTDNEP1-212ENST00000576613 CCKP06307 115 aa5.55□□□□□ -1.52
CTDNEP1-212ENST00000576613 WFDC13Q8IUB5 93 aa5.54□□□□□ -1.52
CTDNEP1-212ENST00000576613 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
CTDNEP1-212ENST00000576613 PRO1854Q9UHT4 67 aa5.53□□□□□ -1.52
CTDNEP1-212ENST00000576613 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
CTDNEP1-212ENST00000576613 TMEM238LA0A1B0GVL6 79 aa5.51□□□□□ -1.53
CTDNEP1-212ENST00000576613 A6NJY4 79 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms