RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
CIITA-211ENST00000576601 CFC1P0CG37 223 aa7.23□□□□□ -1.25
CIITA-211ENST00000576601 IFITM1P13164 125 aa7.23□□□□□ -1.25
CIITA-211ENST00000576601 NEBP20929 6669 aa7.2□□□□□ -1.26
CIITA-211ENST00000576601 C20orf202A1L168 122 aa7.2□□□□□ -1.26
CIITA-211ENST00000576601 LCE2BO14633 110 aa7.2□□□□□ -1.26
CIITA-211ENST00000576601 A4D1N5 150 aa7.19□□□□□ -1.26
CIITA-211ENST00000576601 Q6ZVH6 145 aa7.19□□□□□ -1.26
CIITA-211ENST00000576601 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
CIITA-211ENST00000576601 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
CIITA-211ENST00000576601 NHP2Q9NX24 153 aaKnown RBP7.18□□□□□ -1.26
CIITA-211ENST00000576601 Q6ZQY7 126 aa7.17□□□□□ -1.26
CIITA-211ENST00000576601 TCL1BO95988 128 aa7.16□□□□□ -1.26
CIITA-211ENST00000576601 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
CIITA-211ENST00000576601 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
CIITA-211ENST00000576601 F8WEM9 126 aa7.15□□□□□ -1.26
CIITA-211ENST00000576601 TRBV7-7A0A0K0K1E9 115 aa7.14□□□□□ -1.27
CIITA-211ENST00000576601 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
CIITA-211ENST00000576601 CLEC2BQ92478 149 aa7.13□□□□□ -1.27
CIITA-211ENST00000576601 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
CIITA-211ENST00000576601 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
CIITA-211ENST00000576601 C12orf57Q99622 126 aa7.12□□□□□ -1.27
CIITA-211ENST00000576601 MT2AP02795 61 aa7.1□□□□□ -1.27
CIITA-211ENST00000576601 H3BUT2 72 aa7.09□□□□□ -1.27
CIITA-211ENST00000576601 VAMP3Q15836 100 aa7.09□□□□□ -1.27
CIITA-211ENST00000576601 Q6JHZ5 121 aa7.09□□□□□ -1.27
CIITA-211ENST00000576601 HIST3H2BBQ8N257 126 aa7.09□□□□□ -1.27
CIITA-211ENST00000576601 OCIAD2Q56VL3 154 aa7.08□□□□□ -1.28
CIITA-211ENST00000576601 HIST1H2BLQ99880 126 aa7.08□□□□□ -1.28
CIITA-211ENST00000576601 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
CIITA-211ENST00000576601 Q6Q795 121 aa7.07□□□□□ -1.28
CIITA-211ENST00000576601 Q75L30 129 aa7.07□□□□□ -1.28
CIITA-211ENST00000576601 MT1FP04733 61 aa7.06□□□□□ -1.28
CIITA-211ENST00000576601 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
CIITA-211ENST00000576601 KRTAP6-3Q3LI67 103 aa7.05□□□□□ -1.28
CIITA-211ENST00000576601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.05□□□□□ -1.28
CIITA-211ENST00000576601 ATP11AUNQ6ZP68 121 aa7.03□□□□□ -1.28
CIITA-211ENST00000576601 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
CIITA-211ENST00000576601 Q96NJ1 140 aa7.02□□□□□ -1.29
CIITA-211ENST00000576601 LST1O00453 97 aa7.01□□□□□ -1.29
CIITA-211ENST00000576601 S100A2P29034 98 aa7.01□□□□□ -1.29
CIITA-211ENST00000576601 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
CIITA-211ENST00000576601 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
CIITA-211ENST00000576601 PPDPFLQ8WWR9 84 aa7□□□□□ -1.29
CIITA-211ENST00000576601 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
CIITA-211ENST00000576601 HIST1H4GQ99525 98 aa7□□□□□ -1.29
CIITA-211ENST00000576601 SNHG12Q9BXW3 62 aa7□□□□□ -1.29
CIITA-211ENST00000576601 C20orf166-AS1Q96NR2 134 aa6.98□□□□□ -1.29
CIITA-211ENST00000576601 A8MUU9 505 aa6.97□□□□□ -1.29
CIITA-211ENST00000576601 COX8AP10176 69 aa6.96□□□□□ -1.3
CIITA-211ENST00000576601 A0A087WSZ3 146 aa6.95□□□□□ -1.3
CIITA-211ENST00000576601 DSCR10P59022 87 aa6.95□□□□□ -1.3
CIITA-211ENST00000576601 SCGB1D1O95968 90 aa6.94□□□□□ -1.3
CIITA-211ENST00000576601 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
CIITA-211ENST00000576601 SS18L2Q9UHA2 77 aa6.94□□□□□ -1.3
CIITA-211ENST00000576601 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
CIITA-211ENST00000576601 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
CIITA-211ENST00000576601 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
CIITA-211ENST00000576601 RAB37Q96AX2 223 aa6.91□□□□□ -1.3
CIITA-211ENST00000576601 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
CIITA-211ENST00000576601 A0A0B4J2C4 111 aa6.9□□□□□ -1.3
CIITA-211ENST00000576601 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
CIITA-211ENST00000576601 DLEU1O43261 78 aa6.9□□□□□ -1.3
CIITA-211ENST00000576601 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
CIITA-211ENST00000576601 S100A6P06703 90 aa6.89□□□□□ -1.31
CIITA-211ENST00000576601 SIGMAR1Q99720 223 aa6.89□□□□□ -1.31
CIITA-211ENST00000576601 A0A1B0GV72 72 aa6.88□□□□□ -1.31
CIITA-211ENST00000576601 H3BMG7 143 aa6.88□□□□□ -1.31
CIITA-211ENST00000576601 PAM16Q9Y3D7 125 aa6.88□□□□□ -1.31
CIITA-211ENST00000576601 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
CIITA-211ENST00000576601 H0YGX0 51 aa6.87□□□□□ -1.31
CIITA-211ENST00000576601 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
CIITA-211ENST00000576601 SPATA45Q537H7 98 aa6.86□□□□□ -1.31
CIITA-211ENST00000576601 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
CIITA-211ENST00000576601 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
CIITA-211ENST00000576601 TRBV20-1A0A075B6N2 111 aa6.85□□□□□ -1.31
CIITA-211ENST00000576601 FABP2P12104 132 aa6.85□□□□□ -1.31
CIITA-211ENST00000576601 TRIAP1O43715 76 aa6.84□□□□□ -1.31
CIITA-211ENST00000576601 FXYD2P54710 66 aa6.84□□□□□ -1.31
CIITA-211ENST00000576601 CEND1Q8N111 149 aa6.83□□□□□ -1.32
CIITA-211ENST00000576601 SNCGO76070 127 aa6.82□□□□□ -1.32
CIITA-211ENST00000576601 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
CIITA-211ENST00000576601 HRES1P13985 223 aa6.82□□□□□ -1.32
CIITA-211ENST00000576601 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
CIITA-211ENST00000576601 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
CIITA-211ENST00000576601 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
CIITA-211ENST00000576601 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
CIITA-211ENST00000576601 MPLKIPQ8TAP9 179 aa6.81□□□□□ -1.32
CIITA-211ENST00000576601 PRO1854Q9UHT4 67 aa6.81□□□□□ -1.32
CIITA-211ENST00000576601 A0A1B0GX51 115 aa6.8□□□□□ -1.32
CIITA-211ENST00000576601 LINC00313P59037 77 aa6.8□□□□□ -1.32
CIITA-211ENST00000576601 VAMP8Q9BV40 100 aa6.8□□□□□ -1.32
CIITA-211ENST00000576601 K7ERJ3 54 aa6.78□□□□□ -1.32
CIITA-211ENST00000576601 TRBV7-4A0A0J9YYF1 115 aa6.77□□□□□ -1.33
CIITA-211ENST00000576601 ANKRD29Q8N6D5 301 aa6.77□□□□□ -1.33
CIITA-211ENST00000576601 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
CIITA-211ENST00000576601 S100A1P23297 94 aa6.76□□□□□ -1.33
CIITA-211ENST00000576601 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
CIITA-211ENST00000576601 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
CIITA-211ENST00000576601 A6NJY4 79 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms