RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
CTDNEP1-211ENST00000575783 SLC7A5P1Q8MH63 180 aa7.96□□□□□ -1.14
CTDNEP1-211ENST00000575783 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
CTDNEP1-211ENST00000575783 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
CTDNEP1-211ENST00000575783 HRES1P13985 223 aa7.93□□□□□ -1.14
CTDNEP1-211ENST00000575783 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
CTDNEP1-211ENST00000575783 ZNF815PA8K554 130 aa7.92□□□□□ -1.14
CTDNEP1-211ENST00000575783 OCIAD2Q56VL3 154 aa7.92□□□□□ -1.14
CTDNEP1-211ENST00000575783 DSCR10P59022 87 aa7.9□□□□□ -1.14
CTDNEP1-211ENST00000575783 LINC00310P59036 64 aa7.9□□□□□ -1.14
CTDNEP1-211ENST00000575783 TTTY13Q9BZ97 58 aa7.9□□□□□ -1.14
CTDNEP1-211ENST00000575783 SMIM11BQ8TCY0 68 aa7.88□□□□□ -1.15
CTDNEP1-211ENST00000575783 Q6ZQY7 126 aa7.87□□□□□ -1.15
CTDNEP1-211ENST00000575783 APOC3P02656 99 aa7.86□□□□□ -1.15
CTDNEP1-211ENST00000575783 Q6ZVH6 145 aa7.86□□□□□ -1.15
CTDNEP1-211ENST00000575783 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
CTDNEP1-211ENST00000575783 YPEL4Q96NS1 127 aa7.86□□□□□ -1.15
CTDNEP1-211ENST00000575783 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
CTDNEP1-211ENST00000575783 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
CTDNEP1-211ENST00000575783 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
CTDNEP1-211ENST00000575783 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
CTDNEP1-211ENST00000575783 H3BUT2 72 aa7.83□□□□□ -1.16
CTDNEP1-211ENST00000575783 TRGC2P03986 189 aa7.83□□□□□ -1.16
CTDNEP1-211ENST00000575783 VAMP3Q15836 100 aa7.83□□□□□ -1.16
CTDNEP1-211ENST00000575783 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
CTDNEP1-211ENST00000575783 SNAPINO95295 136 aa7.82□□□□□ -1.16
CTDNEP1-211ENST00000575783 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
CTDNEP1-211ENST00000575783 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
CTDNEP1-211ENST00000575783 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
CTDNEP1-211ENST00000575783 IFITM1P13164 125 aa7.8□□□□□ -1.16
CTDNEP1-211ENST00000575783 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
CTDNEP1-211ENST00000575783 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
CTDNEP1-211ENST00000575783 A8MWP4 228 aa7.79□□□□□ -1.16
CTDNEP1-211ENST00000575783 SVBPQ8N300 66 aa7.79□□□□□ -1.16
CTDNEP1-211ENST00000575783 SYS1-DBNDD2H3BUS1 97 aa7.78□□□□□ -1.16
CTDNEP1-211ENST00000575783 LINC00313P59037 77 aa7.78□□□□□ -1.16
CTDNEP1-211ENST00000575783 NDUFA5Q16718 116 aa7.76□□□□□ -1.17
CTDNEP1-211ENST00000575783 A0A087WSZ3 146 aa7.75□□□□□ -1.17
CTDNEP1-211ENST00000575783 SIGMAR1Q99720 223 aa7.75□□□□□ -1.17
CTDNEP1-211ENST00000575783 COLCA2A8K830 154 aa7.74□□□□□ -1.17
CTDNEP1-211ENST00000575783 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
CTDNEP1-211ENST00000575783 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-211ENST00000575783 MDN1Q9NU22 5596 aa7.72□□□□□ -1.17
CTDNEP1-211ENST00000575783 LINC01545Q5VT33 79 aa7.72□□□□□ -1.17
CTDNEP1-211ENST00000575783 TEN1Q86WV5 123 aa7.72□□□□□ -1.17
CTDNEP1-211ENST00000575783 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.18
CTDNEP1-211ENST00000575783 PET117Q6UWS5 81 aa7.68□□□□□ -1.18
CTDNEP1-211ENST00000575783 IGKV4-1P06312 121 aa7.66□□□□□ -1.18
CTDNEP1-211ENST00000575783 KMT2DO14686 5537 aa7.65□□□□□ -1.19
CTDNEP1-211ENST00000575783 SPINK7P58062 85 aa7.64□□□□□ -1.19
CTDNEP1-211ENST00000575783 A6NN06 94 aa7.63□□□□□ -1.19
CTDNEP1-211ENST00000575783 C12orf57Q99622 126 aa7.61□□□□□ -1.19
CTDNEP1-211ENST00000575783 IGHV6-1A0A0B4J1U7 121 aa7.6□□□□□ -1.19
CTDNEP1-211ENST00000575783 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
CTDNEP1-211ENST00000575783 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
CTDNEP1-211ENST00000575783 DEFB116Q30KQ4 102 aa7.59□□□□□ -1.19
CTDNEP1-211ENST00000575783 BVES-AS1Q5T3Y7 98 aa7.58□□□□□ -1.2
CTDNEP1-211ENST00000575783 GHRHP01286 108 aa7.57□□□□□ -1.2
CTDNEP1-211ENST00000575783 H3BMG7 143 aa7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 KRTDAPP60985 99 aa7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
CTDNEP1-211ENST00000575783 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
CTDNEP1-211ENST00000575783 KRTAP5-9P26371 169 aa7.55□□□□□ -1.2
CTDNEP1-211ENST00000575783 ATOH7Q8N100 152 aa7.55□□□□□ -1.2
CTDNEP1-211ENST00000575783 SNCGO76070 127 aa7.5□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BKO60814 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BJP06899 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 FABP2P12104 132 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BOP23527 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BBP33778 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BDP58876 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BCP62807 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST2H2BEQ16778 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BHQ93079 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BNQ99877 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 HIST1H2BMQ99879 126 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
CTDNEP1-211ENST00000575783 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
CTDNEP1-211ENST00000575783 TRBV7-4A0A0J9YYF1 115 aa7.44□□□□□ -1.22
CTDNEP1-211ENST00000575783 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
CTDNEP1-211ENST00000575783 MT1BP07438 61 aa7.43□□□□□ -1.22
CTDNEP1-211ENST00000575783 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
CTDNEP1-211ENST00000575783 A0A1B0GV72 72 aa7.42□□□□□ -1.22
CTDNEP1-211ENST00000575783 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
CTDNEP1-211ENST00000575783 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
CTDNEP1-211ENST00000575783 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
CTDNEP1-211ENST00000575783 H0YGX0 51 aa7.4□□□□□ -1.22
CTDNEP1-211ENST00000575783 Q5VV11 94 aa7.4□□□□□ -1.22
CTDNEP1-211ENST00000575783 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
CTDNEP1-211ENST00000575783 TRACP01848 142 aa7.36□□□□□ -1.23
CTDNEP1-211ENST00000575783 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-211ENST00000575783 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
CTDNEP1-211ENST00000575783 CCKP06307 115 aa7.34□□□□□ -1.23
CTDNEP1-211ENST00000575783 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
CTDNEP1-211ENST00000575783 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms