RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LINC01547P58512 204 aaPredicted RBP14.52□□□□□ -0.09
ATPAF1-213ENST00000574428 IGLV5-48A0A075B6I7 105 aa14.5□□□□□ -0.09
ATPAF1-213ENST00000574428 H3BQ85 93 aa14.5□□□□□ -0.09
ATPAF1-213ENST00000574428 GAGE2AQ6NT46 116 aa14.5□□□□□ -0.09
ATPAF1-213ENST00000574428 SPRR4Q96PI1 79 aa14.5□□□□□ -0.09
ATPAF1-213ENST00000574428 JMJD7-PLA2G4BH0Y9G9 81 aa14.49□□□□□ -0.09
ATPAF1-213ENST00000574428 Q8N377 158 aa14.49□□□□□ -0.09
ATPAF1-213ENST00000574428 SPINK6Q6UWN8 80 aa14.47□□□□□ -0.09
ATPAF1-213ENST00000574428 Q8N1X5 172 aa14.47□□□□□ -0.09
ATPAF1-213ENST00000574428 ZNF706Q9Y5V0 76 aaPredicted RBP14.47□□□□□ -0.09
ATPAF1-213ENST00000574428 SIGMAR1Q99720 223 aa14.45□□□□□ -0.1
ATPAF1-213ENST00000574428 BIRC6Q9NR09 4857 aa14.44□□□□□ -0.1
ATPAF1-213ENST00000574428 GHRHP01286 108 aa14.44□□□□□ -0.1
ATPAF1-213ENST00000574428 ACYP1P07311 99 aa14.44□□□□□ -0.1
ATPAF1-213ENST00000574428 C3orf22Q8N5N4 141 aa14.44□□□□□ -0.1
ATPAF1-213ENST00000574428 LAMTOR3Q9UHA4 124 aa14.44□□□□□ -0.1
ATPAF1-213ENST00000574428 ANAPC11Q9NYG5 84 aa14.43□□□□□ -0.1
ATPAF1-213ENST00000574428 SPRR1BP22528 89 aa14.41□□□□□ -0.1
ATPAF1-213ENST00000574428 LINC00483Q53H64 154 aa14.4□□□□□ -0.1
ATPAF1-213ENST00000574428 MT-ATP8P03928 68 aa14.39□□□□□ -0.11
ATPAF1-213ENST00000574428 RBM3P98179 157 aaKnown RBP14.39□□□□□ -0.11
ATPAF1-213ENST00000574428 SMIM29Q86T20 159 aa14.39□□□□□ -0.11
ATPAF1-213ENST00000574428 CCKP06307 115 aa14.37□□□□□ -0.11
ATPAF1-213ENST00000574428 NDUFV3P56181 108 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-213ENST00000574428 KRTAP1-4P0C5Y4 121 aa14.35□□□□□ -0.11
ATPAF1-213ENST00000574428 LOC110117498A0A087WWA1 95 aa14.33□□□□□ -0.12
ATPAF1-213ENST00000574428 Q6ZQT0 140 aa14.33□□□□□ -0.12
ATPAF1-213ENST00000574428 PKHD1L1Q86WI1 4243 aa14.32□□□□□ -0.12
ATPAF1-213ENST00000574428 DSCR8Q96T75 97 aa14.31□□□□□ -0.12
ATPAF1-213ENST00000574428 IGLV9-49A0A0B4J1Y8 123 aa14.29□□□□□ -0.12
ATPAF1-213ENST00000574428 F8WEM9 126 aa14.29□□□□□ -0.12
ATPAF1-213ENST00000574428 A0A087X002 238 aa14.28□□□□□ -0.12
ATPAF1-213ENST00000574428 LINC00846Q9NV44 126 aa14.28□□□□□ -0.12
ATPAF1-213ENST00000574428 TRBV7-4A0A0J9YYF1 115 aa14.27□□□□□ -0.12
ATPAF1-213ENST00000574428 FAM229BQ4G0N7 80 aa14.27□□□□□ -0.13
ATPAF1-213ENST00000574428 KRTAP4-5Q9BYR2 181 aa14.26□□□□□ -0.13
ATPAF1-213ENST00000574428 PDE6GP18545 87 aa14.24□□□□□ -0.13
ATPAF1-213ENST00000574428 C9orf153Q5TBE3 101 aa14.24□□□□□ -0.13
ATPAF1-213ENST00000574428 MOBPQ13875 183 aa14.23□□□□□ -0.13
ATPAF1-213ENST00000574428 LINC00643Q86TS7 51 aa14.23□□□□□ -0.13
ATPAF1-213ENST00000574428 CRYGAP11844 174 aa14.22□□□□□ -0.13
ATPAF1-213ENST00000574428 KRTAP13-2Q52LG2 175 aa14.22□□□□□ -0.13
ATPAF1-213ENST00000574428 A0A0G2JQZ4 141 aa14.19□□□□□ -0.14
ATPAF1-213ENST00000574428 SCGB1A1P11684 91 aa14.19□□□□□ -0.14
ATPAF1-213ENST00000574428 HERC2O95714 4834 aa14.19□□□□□ -0.14
ATPAF1-213ENST00000574428 IGLV8-61A0A075B6I0 122 aa14.19□□□□□ -0.14
ATPAF1-213ENST00000574428 PRR26Q8N8Z3 221 aa14.19□□□□□ -0.14
ATPAF1-213ENST00000574428 Q8NBF4 154 aa14.18□□□□□ -0.14
ATPAF1-213ENST00000574428 PCP4P48539 62 aa14.17□□□□□ -0.14
ATPAF1-213ENST00000574428 IGFL1Q6UW32 110 aa14.15□□□□□ -0.14
ATPAF1-213ENST00000574428 TRBV7-7A0A0K0K1E9 115 aa14.14□□□□□ -0.15
ATPAF1-213ENST00000574428 C21orf62-AS1Q17RA5 79 aa14.12□□□□□ -0.15
ATPAF1-213ENST00000574428 Q6Q795 121 aa14.12□□□□□ -0.15
ATPAF1-213ENST00000574428 Q6JHZ5 121 aa14.11□□□□□ -0.15
ATPAF1-213ENST00000574428 TYMSOSQ8TAI1 123 aa14.11□□□□□ -0.15
ATPAF1-213ENST00000574428 UBL5Q9BZL1 73 aa14.09□□□□□ -0.15
ATPAF1-213ENST00000574428 FLG2Q5D862 2391 aaPredicted RBP14.09□□□□□ -0.15
ATPAF1-213ENST00000574428 SSBP3-AS1Q7Z2R9 100 aa14.09□□□□□ -0.15
ATPAF1-213ENST00000574428 IGKV3D-7A0A0C4DH55 119 aa14.06□□□□□ -0.16
ATPAF1-213ENST00000574428 A0A1W2PNM2 257 aa14.05□□□□□ -0.16
ATPAF1-213ENST00000574428 IMUPQ9GZP8 106 aa14.05□□□□□ -0.16
ATPAF1-213ENST00000574428 LRP1Q07954 4544 aaKnown RBP14.04□□□□□ -0.16
ATPAF1-213ENST00000574428 Q6ZVQ6 151 aa14.04□□□□□ -0.16
ATPAF1-213ENST00000574428 HRCT1Q6UXD1 115 aa14.03□□□□□ -0.16
ATPAF1-213ENST00000574428 ABCA13Q86UQ4 5058 aa14.01□□□□□ -0.17
ATPAF1-213ENST00000574428 MYCBP2O75592 4640 aa14.01□□□□□ -0.17
ATPAF1-213ENST00000574428 ATP5EP2Q5VTU8 51 aa14□□□□□ -0.17
ATPAF1-213ENST00000574428 FAT3Q8TDW7 4589 aa13.99□□□□□ -0.17
ATPAF1-213ENST00000574428 KRTAP10-8P60410 259 aa13.97□□□□□ -0.17
ATPAF1-213ENST00000574428 LINC00304Q8N9R0 145 aa13.94□□□□□ -0.18
ATPAF1-213ENST00000574428 A0A1B0GW54 56 aa13.93□□□□□ -0.18
ATPAF1-213ENST00000574428 OXTP01178 125 aa13.92□□□□□ -0.18
ATPAF1-213ENST00000574428 MT1HL1P0DM35 61 aa13.91□□□□□ -0.18
ATPAF1-213ENST00000574428 CD164Q04900 197 aa13.91□□□□□ -0.18
ATPAF1-213ENST00000574428 C4orf48Q5BLP8 95 aa13.91□□□□□ -0.18
ATPAF1-213ENST00000574428 TNXBP22105 4242 aa13.9□□□□□ -0.18
ATPAF1-213ENST00000574428 A0A087WSZ3 146 aa13.9□□□□□ -0.18
ATPAF1-213ENST00000574428 FAM236AA0A1B0GUQ0 79 aa13.9□□□□□ -0.18
ATPAF1-213ENST00000574428 FAM236BA0A1B0GV22 79 aa13.9□□□□□ -0.18
ATPAF1-213ENST00000574428 NREPQ16612 68 aa13.88□□□□□ -0.19
ATPAF1-213ENST00000574428 A0A087WVE0 104 aa13.88□□□□□ -0.19
ATPAF1-213ENST00000574428 HIST1H4AP62805 103 aaKnown RBP13.87□□□□□ -0.19
ATPAF1-213ENST00000574428 CXCL6P80162 114 aa13.87□□□□□ -0.19
ATPAF1-213ENST00000574428 KRTAP29-1A8MX34 341 aaPredicted RBP13.86□□□□□ -0.19
ATPAF1-213ENST00000574428 SPINK1P00995 79 aa13.84□□□□□ -0.19
ATPAF1-213ENST00000574428 SPAG11AQ6PDA7 123 aa13.84□□□□□ -0.19
ATPAF1-213ENST00000574428 ANAPC13Q9BS18 74 aa13.83□□□□□ -0.2
ATPAF1-213ENST00000574428 BPY2O14599 106 aa13.76□□□□□ -0.21
ATPAF1-213ENST00000574428 SS18L2Q9UHA2 77 aa13.76□□□□□ -0.21
ATPAF1-213ENST00000574428 LIMD2Q9BT23 127 aa13.76□□□□□ -0.21
ATPAF1-213ENST00000574428 RPS29P62273 56 aaKnown RBP13.74□□□□□ -0.21
ATPAF1-213ENST00000574428 PCLOQ9Y6V0 5065 aa13.73□□□□□ -0.21
ATPAF1-213ENST00000574428 Q5XG85 94 aa13.73□□□□□ -0.21
ATPAF1-213ENST00000574428 J3QL48 77 aa13.72□□□□□ -0.21
ATPAF1-213ENST00000574428 Q8N9L7 120 aa13.71□□□□□ -0.22
ATPAF1-213ENST00000574428 IGKV4-1P06312 121 aa13.68□□□□□ -0.22
ATPAF1-213ENST00000574428 DEFB116Q30KQ4 102 aa13.68□□□□□ -0.22
ATPAF1-213ENST00000574428 ATOX1O00244 68 aa13.68□□□□□ -0.22
ATPAF1-213ENST00000574428 ASB16-AS1Q495Z4 193 aa13.67□□□□□ -0.22
ATPAF1-213ENST00000574428 Q96NJ1 140 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms