RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PSPHP1O15172 72 aa6.62□□□□□ -1.35
USP43-205ENST00000574408 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
USP43-205ENST00000574408 H7BZZ5 65 aa6.62□□□□□ -1.35
USP43-205ENST00000574408 V9GYY9 64 aa6.62□□□□□ -1.35
USP43-205ENST00000574408 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
USP43-205ENST00000574408 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
USP43-205ENST00000574408 FUSP35637 526 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP43-205ENST00000574408 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
USP43-205ENST00000574408 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
USP43-205ENST00000574408 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
USP43-205ENST00000574408 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
USP43-205ENST00000574408 PRLHP81277 87 aa6.6□□□□□ -1.35
USP43-205ENST00000574408 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.36
USP43-205ENST00000574408 WFDC13Q8IUB5 93 aa6.59□□□□□ -1.36
USP43-205ENST00000574408 A0A087WTM6 91 aa6.58□□□□□ -1.36
USP43-205ENST00000574408 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
USP43-205ENST00000574408 PANO1I0J062 215 aa6.57□□□□□ -1.36
USP43-205ENST00000574408 TGP01266 2768 aa6.57□□□□□ -1.36
USP43-205ENST00000574408 Q6ZR54 194 aa6.57□□□□□ -1.36
USP43-205ENST00000574408 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
USP43-205ENST00000574408 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
USP43-205ENST00000574408 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
USP43-205ENST00000574408 LY6G6CO95867 125 aa6.54□□□□□ -1.36
USP43-205ENST00000574408 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
USP43-205ENST00000574408 FAM229BQ4G0N7 80 aa6.54□□□□□ -1.36
USP43-205ENST00000574408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
USP43-205ENST00000574408 TNP2Q05952 138 aa6.53□□□□□ -1.36
USP43-205ENST00000574408 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
USP43-205ENST00000574408 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
USP43-205ENST00000574408 RTL8CO15255 209 aa6.53□□□□□ -1.36
USP43-205ENST00000574408 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
USP43-205ENST00000574408 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
USP43-205ENST00000574408 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
USP43-205ENST00000574408 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
USP43-205ENST00000574408 UBE2AP49459 152 aa6.51□□□□□ -1.37
USP43-205ENST00000574408 KRTAP21-3Q3LHN1 58 aa6.51□□□□□ -1.37
USP43-205ENST00000574408 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
USP43-205ENST00000574408 A0A1W2PNM2 257 aa6.51□□□□□ -1.37
USP43-205ENST00000574408 CXCL6P80162 114 aa6.5□□□□□ -1.37
USP43-205ENST00000574408 Q8NBF4 154 aa6.49□□□□□ -1.37
USP43-205ENST00000574408 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
USP43-205ENST00000574408 H0Y9J4 135 aa6.48□□□□□ -1.37
USP43-205ENST00000574408 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
USP43-205ENST00000574408 DNAH17Q9UFH2 4485 aa6.48□□□□□ -1.37
USP43-205ENST00000574408 IGLV5-52A0A0A0MRZ9 124 aa6.48□□□□□ -1.37
USP43-205ENST00000574408 BCE1O60756 84 aa6.48□□□□□ -1.37
USP43-205ENST00000574408 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
USP43-205ENST00000574408 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
USP43-205ENST00000574408 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
USP43-205ENST00000574408 LINC00208Q96KT6 92 aa6.46□□□□□ -1.37
USP43-205ENST00000574408 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
USP43-205ENST00000574408 IGFL1Q6UW32 110 aa6.46□□□□□ -1.38
USP43-205ENST00000574408 A0A1B0GW54 56 aa6.45□□□□□ -1.38
USP43-205ENST00000574408 NDUFC1O43677 76 aa6.45□□□□□ -1.38
USP43-205ENST00000574408 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
USP43-205ENST00000574408 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
USP43-205ENST00000574408 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 IGKV4-1P06312 121 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 SPRR1BP22528 89 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 A0A087WSZ3 146 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 K7EQZ3 153 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 NDUFS5O43920 106 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
USP43-205ENST00000574408 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
USP43-205ENST00000574408 DNAH6Q9C0G6 4158 aa6.41□□□□□ -1.38
USP43-205ENST00000574408 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
USP43-205ENST00000574408 MP68P56378 58 aa6.4□□□□□ -1.38
USP43-205ENST00000574408 A8MUN3 132 aa6.4□□□□□ -1.39
USP43-205ENST00000574408 PMAIP1Q13794 54 aa6.4□□□□□ -1.39
USP43-205ENST00000574408 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.39
USP43-205ENST00000574408 PCOTHQ58A44 107 aa6.4□□□□□ -1.39
USP43-205ENST00000574408 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
USP43-205ENST00000574408 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
USP43-205ENST00000574408 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
USP43-205ENST00000574408 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
USP43-205ENST00000574408 OCR1Q9BZK8 76 aa6.36□□□□□ -1.39
USP43-205ENST00000574408 DSCR10P59022 87 aa6.35□□□□□ -1.39
USP43-205ENST00000574408 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
USP43-205ENST00000574408 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
USP43-205ENST00000574408 ZNF861PO60384 105 aa6.35□□□□□ -1.39
USP43-205ENST00000574408 A8MU10 97 aa6.35□□□□□ -1.39
USP43-205ENST00000574408 ZNF706Q9Y5V0 76 aaPredicted RBP6.34□□□□□ -1.39
USP43-205ENST00000574408 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
USP43-205ENST00000574408 A6NED7 52 aa6.34□□□□□ -1.39
USP43-205ENST00000574408 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
USP43-205ENST00000574408 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
USP43-205ENST00000574408 HYDINQ4G0P3 5121 aa6.33□□□□□ -1.4
USP43-205ENST00000574408 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
USP43-205ENST00000574408 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
USP43-205ENST00000574408 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
USP43-205ENST00000574408 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
USP43-205ENST00000574408 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
USP43-205ENST00000574408 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
USP43-205ENST00000574408 TRAV22A0A0B4J277 110 aa6.31□□□□□ -1.4
USP43-205ENST00000574408 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
USP43-205ENST00000574408 H0Y9P7 68 aa6.29□□□□□ -1.4
USP43-205ENST00000574408 MOBPQ13875 183 aa6.29□□□□□ -1.4
USP43-205ENST00000574408 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
USP43-205ENST00000574408 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
USP43-205ENST00000574408 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms