RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 REG3GQ6UW15 175 aa8.79□□□□□ -1
TVP23A-207ENST00000573360 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
TVP23A-207ENST00000573360 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
TVP23A-207ENST00000573360 A0A0G2JQZ4 141 aa8.78□□□□□ -1
TVP23A-207ENST00000573360 C5orf47Q569G3 176 aa8.77□□□□□ -1
TVP23A-207ENST00000573360 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
TVP23A-207ENST00000573360 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
TVP23A-207ENST00000573360 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
TVP23A-207ENST00000573360 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
TVP23A-207ENST00000573360 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
TVP23A-207ENST00000573360 DEFB116Q30KQ4 102 aa8.76□□□□□ -1.01
TVP23A-207ENST00000573360 Q6ZRX8 168 aa8.75□□□□□ -1.01
TVP23A-207ENST00000573360 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
TVP23A-207ENST00000573360 KLKP1Q107X0 134 aa8.73□□□□□ -1.01
TVP23A-207ENST00000573360 Q9BRP9 147 aa8.73□□□□□ -1.01
TVP23A-207ENST00000573360 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
TVP23A-207ENST00000573360 BCE1O60756 84 aa8.73□□□□□ -1.01
TVP23A-207ENST00000573360 SMIM29Q86T20 159 aa8.72□□□□□ -1.01
TVP23A-207ENST00000573360 HYDINQ4G0P3 5121 aa8.72□□□□□ -1.01
TVP23A-207ENST00000573360 A0A1W2PNM2 257 aa8.71□□□□□ -1.01
TVP23A-207ENST00000573360 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.01
TVP23A-207ENST00000573360 PRYO14603 147 aa8.7□□□□□ -1.02
TVP23A-207ENST00000573360 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
TVP23A-207ENST00000573360 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
TVP23A-207ENST00000573360 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
TVP23A-207ENST00000573360 ANAPC11Q9NYG5 84 aa8.68□□□□□ -1.02
TVP23A-207ENST00000573360 NDUFC1O43677 76 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 PRR4Q16378 134 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 Q5XG85 94 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 WFDC13Q8IUB5 93 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 Q8NBF4 154 aa8.67□□□□□ -1.02
TVP23A-207ENST00000573360 DYNC2H1Q8NCM8 4307 aaKnown RBP8.67□□□□□ -1.02
TVP23A-207ENST00000573360 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
TVP23A-207ENST00000573360 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
TVP23A-207ENST00000573360 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
TVP23A-207ENST00000573360 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.03
TVP23A-207ENST00000573360 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
TVP23A-207ENST00000573360 IGLV5-37A0A075B6J1 123 aa8.64□□□□□ -1.03
TVP23A-207ENST00000573360 K7EQZ3 153 aa8.64□□□□□ -1.03
TVP23A-207ENST00000573360 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
TVP23A-207ENST00000573360 A0A087WSZ3 146 aa8.63□□□□□ -1.03
TVP23A-207ENST00000573360 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
TVP23A-207ENST00000573360 OCR1Q9BZK8 76 aa8.62□□□□□ -1.03
TVP23A-207ENST00000573360 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
TVP23A-207ENST00000573360 LCE6AA0A183 80 aa8.62□□□□□ -1.03
TVP23A-207ENST00000573360 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
TVP23A-207ENST00000573360 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
TVP23A-207ENST00000573360 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
TVP23A-207ENST00000573360 SPRR1AP35321 89 aa8.59□□□□□ -1.03
TVP23A-207ENST00000573360 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
TVP23A-207ENST00000573360 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
TVP23A-207ENST00000573360 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
TVP23A-207ENST00000573360 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
TVP23A-207ENST00000573360 DSCR10P59022 87 aa8.57□□□□□ -1.04
TVP23A-207ENST00000573360 IGFL1Q6UW32 110 aa8.57□□□□□ -1.04
TVP23A-207ENST00000573360 BRK1Q8WUW1 75 aa8.57□□□□□ -1.04
TVP23A-207ENST00000573360 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
TVP23A-207ENST00000573360 LINC00336Q6ZUF6 198 aa8.56□□□□□ -1.04
TVP23A-207ENST00000573360 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
TVP23A-207ENST00000573360 HCG22E2RYF7 251 aa8.55□□□□□ -1.04
TVP23A-207ENST00000573360 FAM229BQ4G0N7 80 aa8.54□□□□□ -1.04
TVP23A-207ENST00000573360 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.04
TVP23A-207ENST00000573360 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
TVP23A-207ENST00000573360 H0Y9J4 135 aa8.52□□□□□ -1.05
TVP23A-207ENST00000573360 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
TVP23A-207ENST00000573360 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
TVP23A-207ENST00000573360 MP68P56378 58 aa8.5□□□□□ -1.05
TVP23A-207ENST00000573360 A0A1B0GW54 56 aa8.5□□□□□ -1.05
TVP23A-207ENST00000573360 HECTD4Q9Y4D8 3996 aa8.49□□□□□ -1.05
TVP23A-207ENST00000573360 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
TVP23A-207ENST00000573360 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
TVP23A-207ENST00000573360 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
TVP23A-207ENST00000573360 MOBPQ13875 183 aa8.47□□□□□ -1.05
TVP23A-207ENST00000573360 ZNF861PO60384 105 aa8.47□□□□□ -1.05
TVP23A-207ENST00000573360 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
TVP23A-207ENST00000573360 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
TVP23A-207ENST00000573360 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
TVP23A-207ENST00000573360 PSPHP1O15172 72 aa8.42□□□□□ -1.06
TVP23A-207ENST00000573360 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
TVP23A-207ENST00000573360 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
TVP23A-207ENST00000573360 H0Y9P7 68 aa8.41□□□□□ -1.06
TVP23A-207ENST00000573360 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
TVP23A-207ENST00000573360 NDUFS5O43920 106 aa8.4□□□□□ -1.06
TVP23A-207ENST00000573360 NDUFB1O75438 58 aa8.39□□□□□ -1.07
TVP23A-207ENST00000573360 SPINK6Q6UWN8 80 aa8.39□□□□□ -1.07
TVP23A-207ENST00000573360 ALMS1Q8TCU4 4167 aa8.38□□□□□ -1.07
TVP23A-207ENST00000573360 hDV103S1A0JD37 113 aa8.37□□□□□ -1.07
TVP23A-207ENST00000573360 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
TVP23A-207ENST00000573360 FAT2Q9NYQ8 4349 aa8.37□□□□□ -1.07
TVP23A-207ENST00000573360 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
TVP23A-207ENST00000573360 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
TVP23A-207ENST00000573360 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
TVP23A-207ENST00000573360 FAT1Q14517 4588 aa8.35□□□□□ -1.07
TVP23A-207ENST00000573360 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
TVP23A-207ENST00000573360 Q6ZSA8 131 aa8.34□□□□□ -1.07
TVP23A-207ENST00000573360 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
TVP23A-207ENST00000573360 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
TVP23A-207ENST00000573360 A8MWP4 228 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms