RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 COX7BP24311 80 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 ELOF1P60002 83 aaKnown RBP4.35□□□□□ -1.71
NUP88-206ENST00000573169 REG3AQ06141 175 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 C1orf134Q5TEV5 83 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 Q6ZQY7 126 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 LINC00269Q8N2A0 174 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 DIRC1Q969H9 104 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 LAMTOR3Q9UHA4 124 aa4.35□□□□□ -1.71
NUP88-206ENST00000573169 A0A0U1RQV1 116 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 F8WEM9 126 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 HAMPP81172 84 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 LINC00588Q9Y4M8 146 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
NUP88-206ENST00000573169 F8WDY8 70 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 NREPQ16612 68 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 C9orf116Q5BN46 136 aaPredicted RBP4.33□□□□□ -1.72
NUP88-206ENST00000573169 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 RMI2Q96E14 147 aa4.33□□□□□ -1.72
NUP88-206ENST00000573169 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
NUP88-206ENST00000573169 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
NUP88-206ENST00000573169 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
NUP88-206ENST00000573169 VPREB1P12018 145 aa4.32□□□□□ -1.72
NUP88-206ENST00000573169 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
NUP88-206ENST00000573169 LELP1Q5T871 98 aa4.32□□□□□ -1.72
NUP88-206ENST00000573169 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
NUP88-206ENST00000573169 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 M0R378 163 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 BPY2O14599 106 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 IGKV4-1P06312 121 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
NUP88-206ENST00000573169 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
NUP88-206ENST00000573169 IGLV5-48A0A075B6I7 105 aa4.3□□□□□ -1.72
NUP88-206ENST00000573169 ANGP03950 147 aaKnown RBP4.3□□□□□ -1.72
NUP88-206ENST00000573169 ESRGQ1W209 222 aa4.3□□□□□ -1.72
NUP88-206ENST00000573169 Q8N1X5 172 aa4.3□□□□□ -1.72
NUP88-206ENST00000573169 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
NUP88-206ENST00000573169 PRYO14603 147 aa4.29□□□□□ -1.72
NUP88-206ENST00000573169 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
NUP88-206ENST00000573169 KRTAP26-1Q6PEX3 210 aa4.29□□□□□ -1.72
NUP88-206ENST00000573169 CLPSL2Q6UWE3 100 aa4.29□□□□□ -1.72
NUP88-206ENST00000573169 H3BNG1 76 aa4.28□□□□□ -1.72
NUP88-206ENST00000573169 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
NUP88-206ENST00000573169 IGLV10-54A0A075B6I4 117 aa4.27□□□□□ -1.73
NUP88-206ENST00000573169 KCNQ1DNQ9H478 68 aa4.27□□□□□ -1.73
NUP88-206ENST00000573169 A0A096LPF7 62 aa4.26□□□□□ -1.73
NUP88-206ENST00000573169 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
NUP88-206ENST00000573169 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
NUP88-206ENST00000573169 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 Q1T7F1 81 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
NUP88-206ENST00000573169 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
NUP88-206ENST00000573169 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
NUP88-206ENST00000573169 SCXQ7RTU7 201 aa4.24□□□□□ -1.73
NUP88-206ENST00000573169 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
NUP88-206ENST00000573169 KRTAP4-16G5E9R7 235 aaPredicted RBP4.23□□□□□ -1.73
NUP88-206ENST00000573169 SPRR1AP35321 89 aa4.23□□□□□ -1.73
NUP88-206ENST00000573169 Q8N377 158 aa4.23□□□□□ -1.73
NUP88-206ENST00000573169 CAMK2N2Q96S95 79 aa4.23□□□□□ -1.73
NUP88-206ENST00000573169 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
NUP88-206ENST00000573169 DHRS4-AS1Q9P1J3 65 aa4.23□□□□□ -1.73
NUP88-206ENST00000573169 FAT1Q14517 4588 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 DNAH10OSP0CZ25 163 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 Q6ZRU5 148 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 Q8NBF4 154 aa4.22□□□□□ -1.73
NUP88-206ENST00000573169 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 A0A1W2PNM2 257 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 KRTAP10-1P60331 282 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 WFDC10BQ8IUB3 73 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 PRR15Q8IV56 129 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 HERC1Q15751 4861 aa4.21□□□□□ -1.74
NUP88-206ENST00000573169 A0A087WTM6 91 aa4.2□□□□□ -1.74
NUP88-206ENST00000573169 Q8N9L7 120 aa4.2□□□□□ -1.74
NUP88-206ENST00000573169 HIGD2AQ9BW72 106 aa4.2□□□□□ -1.74
NUP88-206ENST00000573169 DSCR10P59022 87 aa4.19□□□□□ -1.74
NUP88-206ENST00000573169 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
NUP88-206ENST00000573169 Q6ZRP5 223 aa4.19□□□□□ -1.74
NUP88-206ENST00000573169 Q6ZRX8 168 aa4.19□□□□□ -1.74
NUP88-206ENST00000573169 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
NUP88-206ENST00000573169 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 NDUFB1O75438 58 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
NUP88-206ENST00000573169 SYCNQ0VAF6 134 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 LINC01556Q5JQF7 62 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 V9GYY9 64 aa4.18□□□□□ -1.74
NUP88-206ENST00000573169 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
NUP88-206ENST00000573169 H3BPC8 53 aa4.17□□□□□ -1.74
NUP88-206ENST00000573169 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms