RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 DNAH7Q8WXX0 4024 aa5.77□□□□□ -1.49
TVP23A-205ENST00000572428 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
TVP23A-205ENST00000572428 BPY2O14599 106 aa5.76□□□□□ -1.49
TVP23A-205ENST00000572428 PRR4Q16378 134 aa5.76□□□□□ -1.49
TVP23A-205ENST00000572428 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
TVP23A-205ENST00000572428 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
TVP23A-205ENST00000572428 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
TVP23A-205ENST00000572428 SPINK7P58062 85 aa5.75□□□□□ -1.49
TVP23A-205ENST00000572428 LELP1Q5T871 98 aa5.75□□□□□ -1.49
TVP23A-205ENST00000572428 Q8IZM0 81 aa5.74□□□□□ -1.49
TVP23A-205ENST00000572428 MIR7-3HGQ8N6C7 128 aa5.74□□□□□ -1.49
TVP23A-205ENST00000572428 A0A087X002 238 aa5.74□□□□□ -1.49
TVP23A-205ENST00000572428 Q6ZQT0 140 aa5.73□□□□□ -1.49
TVP23A-205ENST00000572428 ANGP03950 147 aaKnown RBP5.72□□□□□ -1.49
TVP23A-205ENST00000572428 SLPIP03973 132 aa5.71□□□□□ -1.5
TVP23A-205ENST00000572428 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
TVP23A-205ENST00000572428 COX17Q14061 63 aa5.7□□□□□ -1.5
TVP23A-205ENST00000572428 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
TVP23A-205ENST00000572428 HAMPP81172 84 aa5.7□□□□□ -1.5
TVP23A-205ENST00000572428 A0A087WYN8 130 aa5.69□□□□□ -1.5
TVP23A-205ENST00000572428 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
TVP23A-205ENST00000572428 MUC7Q8TAX7 377 aa5.69□□□□□ -1.5
TVP23A-205ENST00000572428 PRR34Q9NV39 138 aa5.69□□□□□ -1.5
TVP23A-205ENST00000572428 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
TVP23A-205ENST00000572428 CCL18P55774 89 aa5.68□□□□□ -1.5
TVP23A-205ENST00000572428 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
TVP23A-205ENST00000572428 LECT2O14960 151 aa5.68□□□□□ -1.5
TVP23A-205ENST00000572428 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
TVP23A-205ENST00000572428 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
TVP23A-205ENST00000572428 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
TVP23A-205ENST00000572428 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
TVP23A-205ENST00000572428 DNAH10OSP0CZ25 163 aa5.66□□□□□ -1.5
TVP23A-205ENST00000572428 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
TVP23A-205ENST00000572428 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 A0A1B0GW54 56 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 H0YGX0 51 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 LINC01556Q5JQF7 62 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 ORMDL1Q9P0S3 153 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
TVP23A-205ENST00000572428 FBN3Q75N90 2809 aa5.65□□□□□ -1.51
TVP23A-205ENST00000572428 LCE6AA0A183 80 aa5.65□□□□□ -1.51
TVP23A-205ENST00000572428 PLAC8Q9NZF1 115 aa5.65□□□□□ -1.51
TVP23A-205ENST00000572428 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
TVP23A-205ENST00000572428 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
TVP23A-205ENST00000572428 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
TVP23A-205ENST00000572428 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
TVP23A-205ENST00000572428 WFDC10BQ8IUB3 73 aa5.63□□□□□ -1.51
TVP23A-205ENST00000572428 SMIM11BQ8TCY0 68 aa5.63□□□□□ -1.51
TVP23A-205ENST00000572428 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
TVP23A-205ENST00000572428 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
TVP23A-205ENST00000572428 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
TVP23A-205ENST00000572428 Q9BRP9 147 aa5.62□□□□□ -1.51
TVP23A-205ENST00000572428 DNAH6Q9C0G6 4158 aa5.62□□□□□ -1.51
TVP23A-205ENST00000572428 M0R2N4 97 aa5.61□□□□□ -1.51
TVP23A-205ENST00000572428 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
TVP23A-205ENST00000572428 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
TVP23A-205ENST00000572428 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
TVP23A-205ENST00000572428 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
TVP23A-205ENST00000572428 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
TVP23A-205ENST00000572428 JMJD7-PLA2G4BH0Y9G9 81 aa5.59□□□□□ -1.51
TVP23A-205ENST00000572428 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
TVP23A-205ENST00000572428 UNQ6190/PRO20217Q6UXQ8 127 aa5.59□□□□□ -1.51
TVP23A-205ENST00000572428 LYSTQ99698 3801 aa5.59□□□□□ -1.51
TVP23A-205ENST00000572428 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.52
TVP23A-205ENST00000572428 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
TVP23A-205ENST00000572428 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
TVP23A-205ENST00000572428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.58□□□□□ -1.52
TVP23A-205ENST00000572428 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
TVP23A-205ENST00000572428 CASC10Q5T4H9 136 aa5.57□□□□□ -1.52
TVP23A-205ENST00000572428 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
TVP23A-205ENST00000572428 CNBPP62633 177 aaKnown RBP5.56□□□□□ -1.52
TVP23A-205ENST00000572428 Q8N9L7 120 aa5.56□□□□□ -1.52
TVP23A-205ENST00000572428 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
TVP23A-205ENST00000572428 CAMK2N2Q96S95 79 aa5.56□□□□□ -1.52
TVP23A-205ENST00000572428 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
TVP23A-205ENST00000572428 TENM2Q9NT68 2774 aa5.55□□□□□ -1.52
TVP23A-205ENST00000572428 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 KRTAP1-5Q9BYS1 174 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.54□□□□□ -1.52
TVP23A-205ENST00000572428 A8MUU9 505 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 IGLV6-57P01721 117 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 UBE2DNLQ8IWF7 75 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
TVP23A-205ENST00000572428 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
TVP23A-205ENST00000572428 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
TVP23A-205ENST00000572428 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
TVP23A-205ENST00000572428 H3BQ85 93 aa5.52□□□□□ -1.53
TVP23A-205ENST00000572428 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
TVP23A-205ENST00000572428 PDE6GP18545 87 aa5.52□□□□□ -1.53
TVP23A-205ENST00000572428 K7ERS5 55 aa5.51□□□□□ -1.53
TVP23A-205ENST00000572428 LINC00575Q6W349 94 aa5.51□□□□□ -1.53
TVP23A-205ENST00000572428 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
TVP23A-205ENST00000572428 C7orf33Q8WU49 177 aa5.5□□□□□ -1.53
TVP23A-205ENST00000572428 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
TVP23A-205ENST00000572428 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
TVP23A-205ENST00000572428 NDUFB1O75438 58 aa5.49□□□□□ -1.53
TVP23A-205ENST00000572428 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
TVP23A-205ENST00000572428 COA5Q86WW8 74 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms