RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SMIM11BQ8TCY0 68 aa10□□□□□ -0.81
CCDC40-206ENST00000572083 KRTAP9-3Q9BYQ3 159 aa10□□□□□ -0.81
CCDC40-206ENST00000572083 LINC01545Q5VT33 79 aa9.99□□□□□ -0.81
CCDC40-206ENST00000572083 SLC7A5P1Q8MH63 180 aa9.98□□□□□ -0.81
CCDC40-206ENST00000572083 C20orf166-AS1Q96NR2 134 aa9.98□□□□□ -0.81
CCDC40-206ENST00000572083 KRTAP10-10P60014 251 aa9.97□□□□□ -0.81
CCDC40-206ENST00000572083 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
CCDC40-206ENST00000572083 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 A8MUU9 505 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 LST1O00453 97 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 IFITM1P13164 125 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 Q6ZQY7 126 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 MUSTN1Q8IVN3 82 aa9.95□□□□□ -0.82
CCDC40-206ENST00000572083 FAM236DA0A1B0GTK5 79 aa9.94□□□□□ -0.82
CCDC40-206ENST00000572083 FAM236CP0DP71 79 aa9.94□□□□□ -0.82
CCDC40-206ENST00000572083 OCIAD2Q56VL3 154 aa9.92□□□□□ -0.82
CCDC40-206ENST00000572083 PET117Q6UWS5 81 aa9.92□□□□□ -0.82
CCDC40-206ENST00000572083 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
CCDC40-206ENST00000572083 Q6ZVH6 145 aa9.89□□□□□ -0.83
CCDC40-206ENST00000572083 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
CCDC40-206ENST00000572083 VAMP3Q15836 100 aa9.87□□□□□ -0.83
CCDC40-206ENST00000572083 H3BUT2 72 aa9.86□□□□□ -0.83
CCDC40-206ENST00000572083 ANKRD39Q53RE8 183 aa9.86□□□□□ -0.83
CCDC40-206ENST00000572083 COLCA2A8K830 154 aa9.84□□□□□ -0.83
CCDC40-206ENST00000572083 KRTAP16-1A8MUX0 517 aa9.84□□□□□ -0.83
CCDC40-206ENST00000572083 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
CCDC40-206ENST00000572083 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-206ENST00000572083 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
CCDC40-206ENST00000572083 DSCR10P59022 87 aa9.82□□□□□ -0.84
CCDC40-206ENST00000572083 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
CCDC40-206ENST00000572083 LINC00846Q9NV44 126 aa9.82□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
CCDC40-206ENST00000572083 KRTDAPP60985 99 aa9.79□□□□□ -0.84
CCDC40-206ENST00000572083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-206ENST00000572083 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
CCDC40-206ENST00000572083 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
CCDC40-206ENST00000572083 HRES1P13985 223 aa9.78□□□□□ -0.84
CCDC40-206ENST00000572083 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
CCDC40-206ENST00000572083 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
CCDC40-206ENST00000572083 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
CCDC40-206ENST00000572083 A0A087WSZ3 146 aa9.73□□□□□ -0.85
CCDC40-206ENST00000572083 SIGMAR1Q99720 223 aa9.72□□□□□ -0.85
CCDC40-206ENST00000572083 TEN1Q86WV5 123 aa9.71□□□□□ -0.86
CCDC40-206ENST00000572083 KRTAP6-3Q3LI67 103 aa9.7□□□□□ -0.86
CCDC40-206ENST00000572083 A6NJY4 79 aa9.69□□□□□ -0.86
CCDC40-206ENST00000572083 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
CCDC40-206ENST00000572083 NOTCH2NLQ7Z3S9 236 aa9.67□□□□□ -0.86
CCDC40-206ENST00000572083 LINC00313P59037 77 aa9.66□□□□□ -0.86
CCDC40-206ENST00000572083 C12orf57Q99622 126 aa9.65□□□□□ -0.86
CCDC40-206ENST00000572083 NDUFV3P56181 108 aaKnown RBP9.62□□□□□ -0.87
CCDC40-206ENST00000572083 IGKV4-1P06312 121 aa9.58□□□□□ -0.88
CCDC40-206ENST00000572083 MTURNQ8N3F0 131 aa9.58□□□□□ -0.88
CCDC40-206ENST00000572083 COA6Q5JTJ3 125 aaKnown RBP9.57□□□□□ -0.88
CCDC40-206ENST00000572083 H3BMG7 143 aa9.56□□□□□ -0.88
CCDC40-206ENST00000572083 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
CCDC40-206ENST00000572083 SNRPEP62304 92 aaKnown RBP9.54□□□□□ -0.88
CCDC40-206ENST00000572083 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-206ENST00000572083 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
CCDC40-206ENST00000572083 A8MWP4 228 aa9.51□□□□□ -0.89
CCDC40-206ENST00000572083 DEFB116Q30KQ4 102 aa9.51□□□□□ -0.89
CCDC40-206ENST00000572083 IGHV6-1A0A0B4J1U7 121 aa9.5□□□□□ -0.89
CCDC40-206ENST00000572083 SNCGO76070 127 aa9.49□□□□□ -0.89
CCDC40-206ENST00000572083 FABP2P12104 132 aa9.48□□□□□ -0.89
CCDC40-206ENST00000572083 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
CCDC40-206ENST00000572083 NEBP20929 6669 aa9.46□□□□□ -0.9
CCDC40-206ENST00000572083 HSBP1L1C9JCN9 74 aa9.44□□□□□ -0.9
CCDC40-206ENST00000572083 H0YGX0 51 aa9.44□□□□□ -0.9
CCDC40-206ENST00000572083 SPINK7P58062 85 aa9.44□□□□□ -0.9
CCDC40-206ENST00000572083 A0A1B0GV72 72 aa9.43□□□□□ -0.9
CCDC40-206ENST00000572083 LINC00472Q9H8W2 130 aa9.42□□□□□ -0.9
CCDC40-206ENST00000572083 MUC12Q9UKN1 5478 aa9.41□□□□□ -0.9
CCDC40-206ENST00000572083 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
CCDC40-206ENST00000572083 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
CCDC40-206ENST00000572083 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
CCDC40-206ENST00000572083 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
CCDC40-206ENST00000572083 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
CCDC40-206ENST00000572083 GHRHP01286 108 aa9.37□□□□□ -0.91
CCDC40-206ENST00000572083 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
CCDC40-206ENST00000572083 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
CCDC40-206ENST00000572083 A0A1B0GX51 115 aa9.34□□□□□ -0.91
CCDC40-206ENST00000572083 A0A0B4J2C4 111 aa9.32□□□□□ -0.92
CCDC40-206ENST00000572083 TRACP01848 142 aa9.32□□□□□ -0.92
CCDC40-206ENST00000572083 CCKP06307 115 aa9.31□□□□□ -0.92
CCDC40-206ENST00000572083 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
CCDC40-206ENST00000572083 COX8AP10176 69 aa9.29□□□□□ -0.92
CCDC40-206ENST00000572083 KRTAP20-1Q3LI63 56 aa9.29□□□□□ -0.92
CCDC40-206ENST00000572083 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
CCDC40-206ENST00000572083 S100A2P29034 98 aa9.26□□□□□ -0.93
CCDC40-206ENST00000572083 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms