RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, human

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGAM-208	ENST00000570242	KRTAP13-3	Q3SY46	172 aa		5.09	□□□□□ -1.59
ITGAM-208	ENST00000570242		Q6ZVH6	145 aa		5.09	□□□□□ -1.59
ITGAM-208	ENST00000570242	COPS9	Q8WXC6	57 aa		5.09	□□□□□ -1.59
ITGAM-208	ENST00000570242	TTTY13	Q9BZ97	58 aa		5.09	□□□□□ -1.59
ITGAM-208	ENST00000570242	SCGB1D4	Q6XE38	83 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	ST20-AS1	Q8NBB2	130 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	LINC00308	Q8TCZ7	52 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	SPANXD	Q9BXN6	97 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	SPANXC	Q9NY87	97 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	CBY1	Q9Y3M2	126 aa		5.08	□□□□□ -1.6
ITGAM-208	ENST00000570242	IFITM1	P13164	125 aa		5.07	□□□□□ -1.6
ITGAM-208	ENST00000570242	SSBP3-AS1	Q7Z2R9	100 aa		5.07	□□□□□ -1.6
ITGAM-208	ENST00000570242	PCP2	Q8IVA1	136 aa		5.07	□□□□□ -1.6
ITGAM-208	ENST00000570242		Q8N377	158 aa		5.07	□□□□□ -1.6
ITGAM-208	ENST00000570242	RPS29	P62273	56 aa	Known RBP	5.06	□□□□□ -1.6
ITGAM-208	ENST00000570242	JOSD1	Q15040	202 aa	Predicted RBP	5.06	□□□□□ -1.6
ITGAM-208	ENST00000570242	LINC00518	Q8N0U6	118 aa		5.06	□□□□□ -1.6
ITGAM-208	ENST00000570242	C9orf153	Q5TBE3	101 aa		5.04	□□□□□ -1.6
ITGAM-208	ENST00000570242	DLEU1	O43261	78 aa		5.03	□□□□□ -1.6
ITGAM-208	ENST00000570242	SPRR1B	P22528	89 aa		5.03	□□□□□ -1.6
ITGAM-208	ENST00000570242	OR13C6P	Q8NH95	151 aa		5.03	□□□□□ -1.6
ITGAM-208	ENST00000570242	PRAC1	Q96KF2	57 aa		5.03	□□□□□ -1.6
ITGAM-208	ENST00000570242	SLC25A20	O43772	301 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	COX8A	P10176	69 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	HINT1	P49773	126 aa	Predicted RBP	5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	ELOF1	P60002	83 aa	Known RBP	5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	ASB16-AS1	Q495Z4	193 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	LCE1F	Q5T754	118 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	MUSTN1	Q8IVN3	82 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	KRTAP4-1	Q9BYQ7	146 aa		5.02	□□□□□ -1.61
ITGAM-208	ENST00000570242	C6orf99	Q4VX62	202 aa		5.01	□□□□□ -1.61
ITGAM-208	ENST00000570242	DHRS4-AS1	Q9P1J3	65 aa		5.01	□□□□□ -1.61
ITGAM-208	ENST00000570242	COX7B	P24311	80 aa		5	□□□□□ -1.61
ITGAM-208	ENST00000570242	TRAV13-2	A0A0B4J235	113 aa		4.99	□□□□□ -1.61
ITGAM-208	ENST00000570242	SPATA45	Q537H7	98 aa		4.99	□□□□□ -1.61
ITGAM-208	ENST00000570242	VAMP8	Q9BV40	100 aa		4.99	□□□□□ -1.61
ITGAM-208	ENST00000570242	TRBV7-6	A0A0J9YX20	115 aa		4.98	□□□□□ -1.61
ITGAM-208	ENST00000570242	NDUFAF8	A1L188	74 aa		4.98	□□□□□ -1.61
ITGAM-208	ENST00000570242	HIGD1B	Q9P298	99 aa		4.98	□□□□□ -1.61
ITGAM-208	ENST00000570242		A6NDN8	102 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242		Q1RN00	199 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242	PYY3	Q5JQD4	70 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242	SLC25A34	Q6PIV7	304 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242	HRCT1	Q6UXD1	115 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242	C14orf144	Q96I85	54 aa		4.97	□□□□□ -1.61
ITGAM-208	ENST00000570242		A4D1N5	150 aa		4.96	□□□□□ -1.62
ITGAM-208	ENST00000570242	KRTAP10-12	P60413	245 aa		4.96	□□□□□ -1.62
ITGAM-208	ENST00000570242	HIST1H4G	Q99525	98 aa		4.96	□□□□□ -1.62
ITGAM-208	ENST00000570242	LAMTOR3	Q9UHA4	124 aa		4.96	□□□□□ -1.62
ITGAM-208	ENST00000570242	IGLV5-48	A0A075B6I7	105 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242	TEX49	A0A1B0GTD5	131 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242		A0A1B0GWB2	263 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242	TAL2	Q16559	108 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242	DEFB105A	Q8NG35	78 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242	LIMD2	Q9BT23	127 aa		4.95	□□□□□ -1.62
ITGAM-208	ENST00000570242	KRTAP10-5	P60370	271 aa		4.94	□□□□□ -1.62
ITGAM-208	ENST00000570242		A0A0G2JQZ4	141 aa		4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	CD164	Q04900	197 aa		4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	C2orf91	Q6ZV80	131 aa		4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	SMIM11B	Q8TCY0	68 aa		4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	PRO1933	Q9H354	126 aa		4.93	□□□□□ -1.62
ITGAM-208	ENST00000570242	KRTAP16-1	A8MUX0	517 aa		4.92	□□□□□ -1.62
ITGAM-208	ENST00000570242		H7C2G1	150 aa		4.92	□□□□□ -1.62
ITGAM-208	ENST00000570242	VAMP3	Q15836	100 aa		4.92	□□□□□ -1.62
ITGAM-208	ENST00000570242	NHP2	Q9NX24	153 aa	Known RBP	4.92	□□□□□ -1.62
ITGAM-208	ENST00000570242	FSIP2	Q5CZC0	6907 aa		4.91	□□□□□ -1.62
ITGAM-208	ENST00000570242	C9orf92	A6NGG3	77 aa		4.91	□□□□□ -1.62
ITGAM-208	ENST00000570242		Q5XG85	94 aa		4.91	□□□□□ -1.62
ITGAM-208	ENST00000570242	CEND1	Q8N111	149 aa		4.91	□□□□□ -1.62
ITGAM-208	ENST00000570242		A0A0B4J2C4	111 aa		4.9	□□□□□ -1.63
ITGAM-208	ENST00000570242	KRTAP19-2	Q3LHN2	52 aa		4.9	□□□□□ -1.63
ITGAM-208	ENST00000570242	BVES-AS1	Q5T3Y7	98 aa		4.89	□□□□□ -1.63
ITGAM-208	ENST00000570242	C1orf195	Q5TG92	126 aa		4.89	□□□□□ -1.63
ITGAM-208	ENST00000570242	RAB37	Q96AX2	223 aa		4.89	□□□□□ -1.63
ITGAM-208	ENST00000570242	UQCR10	Q9UDW1	63 aa		4.89	□□□□□ -1.63
ITGAM-208	ENST00000570242	PCOTH	Q58A44	107 aa		4.88	□□□□□ -1.63
ITGAM-208	ENST00000570242	C12orf57	Q99622	126 aa		4.88	□□□□□ -1.63
ITGAM-208	ENST00000570242	HSD52	Q0P140	79 aa		4.87	□□□□□ -1.63
ITGAM-208	ENST00000570242	LINC00575	Q6W349	94 aa		4.87	□□□□□ -1.63
ITGAM-208	ENST00000570242	FLG	P20930	4061 aa	Predicted RBP	4.86	□□□□□ -1.63
ITGAM-208	ENST00000570242	IGLV8-61	A0A075B6I0	122 aa		4.86	□□□□□ -1.63
ITGAM-208	ENST00000570242	hADV29S1	A0JD25	119 aa		4.86	□□□□□ -1.63
ITGAM-208	ENST00000570242		Q6ZQY7	126 aa		4.86	□□□□□ -1.63
ITGAM-208	ENST00000570242	PRO1854	Q9UHT4	67 aa		4.86	□□□□□ -1.63
ITGAM-208	ENST00000570242		H0YGX0	51 aa		4.85	□□□□□ -1.63
ITGAM-208	ENST00000570242	SNCG	O76070	127 aa		4.85	□□□□□ -1.63
ITGAM-208	ENST00000570242	FXYD2	P54710	66 aa		4.85	□□□□□ -1.63
ITGAM-208	ENST00000570242	SMIM6	P0DI80	62 aa		4.84	□□□□□ -1.63
ITGAM-208	ENST00000570242		F8WEM9	126 aa		4.83	□□□□□ -1.64
ITGAM-208	ENST00000570242	RPL37	P61927	97 aa	Known RBP	4.83	□□□□□ -1.64
ITGAM-208	ENST00000570242	MT1H	P80294	61 aa		4.83	□□□□□ -1.64
ITGAM-208	ENST00000570242	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.83	□□□□□ -1.64
ITGAM-208	ENST00000570242	PPDPFL	Q8WWR9	84 aa		4.83	□□□□□ -1.64
ITGAM-208	ENST00000570242		A0A1B0GX51	115 aa		4.82	□□□□□ -1.64
ITGAM-208	ENST00000570242	OCIAD2	Q56VL3	154 aa		4.82	□□□□□ -1.64
ITGAM-208	ENST00000570242	IGFL1	Q6UW32	110 aa		4.82	□□□□□ -1.64
ITGAM-208	ENST00000570242	CLEC2B	Q92478	149 aa		4.82	□□□□□ -1.64
ITGAM-208	ENST00000570242	TCL1B	O95988	128 aa		4.81	□□□□□ -1.64
ITGAM-208	ENST00000570242	TRBV7-7	A0A0K0K1E9	115 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms