RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 CASC2Q6XLA1 102 aa13□□□□□ -0.33
SCRT1-201ENST00000569446 MDFIQ99750 246 aa12.99□□□□□ -0.33
SCRT1-201ENST00000569446 C14orf177Q52M58 125 aa12.99□□□□□ -0.33
SCRT1-201ENST00000569446 COL7A1Q02388 2944 aa12.99□□□□□ -0.33
SCRT1-201ENST00000569446 LINC00336Q6ZUF6 198 aa12.97□□□□□ -0.33
SCRT1-201ENST00000569446 C16orf90A8MZG2 172 aa12.97□□□□□ -0.33
SCRT1-201ENST00000569446 TGP01266 2768 aa12.96□□□□□ -0.33
SCRT1-201ENST00000569446 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.34
SCRT1-201ENST00000569446 IGLV5-48A0A075B6I7 105 aa12.95□□□□□ -0.34
SCRT1-201ENST00000569446 F8WDY8 70 aa12.94□□□□□ -0.34
SCRT1-201ENST00000569446 WIPF1O43516 503 aa12.94□□□□□ -0.34
SCRT1-201ENST00000569446 DSCR10P59022 87 aa12.92□□□□□ -0.34
SCRT1-201ENST00000569446 OCR1Q9BZK8 76 aa12.92□□□□□ -0.34
SCRT1-201ENST00000569446 H0Y9P7 68 aa12.91□□□□□ -0.34
SCRT1-201ENST00000569446 LY6G6CO95867 125 aa12.91□□□□□ -0.34
SCRT1-201ENST00000569446 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
SCRT1-201ENST00000569446 FAM229BQ4G0N7 80 aa12.9□□□□□ -0.35
SCRT1-201ENST00000569446 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
SCRT1-201ENST00000569446 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
SCRT1-201ENST00000569446 BCE1O60756 84 aa12.88□□□□□ -0.35
SCRT1-201ENST00000569446 Q5XG85 94 aa12.88□□□□□ -0.35
SCRT1-201ENST00000569446 CIRBP-AS1Q8TBR5 109 aa12.87□□□□□ -0.35
SCRT1-201ENST00000569446 MOBPQ13875 183 aa12.85□□□□□ -0.35
SCRT1-201ENST00000569446 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
SCRT1-201ENST00000569446 ATP5EP56381 51 aaPredicted RBP12.85□□□□□ -0.35
SCRT1-201ENST00000569446 NBDYA0A0U1RRE5 68 aa12.82□□□□□ -0.36
SCRT1-201ENST00000569446 C1orf64Q8NEQ6 169 aa12.82□□□□□ -0.36
SCRT1-201ENST00000569446 FP248Q71RG6 208 aaPredicted RBP12.81□□□□□ -0.36
SCRT1-201ENST00000569446 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
SCRT1-201ENST00000569446 PANO1I0J062 215 aa12.77□□□□□ -0.36
SCRT1-201ENST00000569446 PLA2G2DQ9UNK4 145 aa12.77□□□□□ -0.36
SCRT1-201ENST00000569446 SPRR1AP35321 89 aa12.77□□□□□ -0.37
SCRT1-201ENST00000569446 KRTAP4-16G5E9R7 235 aaPredicted RBP12.76□□□□□ -0.37
SCRT1-201ENST00000569446 CHKB-CPT1BH3BT56 60 aa12.74□□□□□ -0.37
SCRT1-201ENST00000569446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
SCRT1-201ENST00000569446 IGLV5-52A0A0A0MRZ9 124 aa12.73□□□□□ -0.37
SCRT1-201ENST00000569446 C9orf163Q8N9P6 203 aa12.73□□□□□ -0.37
SCRT1-201ENST00000569446 hDV103S1A0JD37 113 aa12.72□□□□□ -0.37
SCRT1-201ENST00000569446 APLNQ9ULZ1 77 aa12.72□□□□□ -0.37
SCRT1-201ENST00000569446 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
SCRT1-201ENST00000569446 NUPR2A6NF83 97 aa12.71□□□□□ -0.37
SCRT1-201ENST00000569446 PRR15LQ9BU68 103 aa12.7□□□□□ -0.38
SCRT1-201ENST00000569446 IGLV5-37A0A075B6J1 123 aa12.7□□□□□ -0.38
SCRT1-201ENST00000569446 PRO0628Q9UI54 55 aa12.69□□□□□ -0.38
SCRT1-201ENST00000569446 A8MUN3 132 aa12.69□□□□□ -0.38
SCRT1-201ENST00000569446 PRR15Q8IV56 129 aa12.69□□□□□ -0.38
SCRT1-201ENST00000569446 TNP2Q05952 138 aa12.68□□□□□ -0.38
SCRT1-201ENST00000569446 RTL8CO15255 209 aa12.67□□□□□ -0.38
SCRT1-201ENST00000569446 A8MWP4 228 aa12.65□□□□□ -0.38
SCRT1-201ENST00000569446 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.39
SCRT1-201ENST00000569446 A6NED7 52 aa12.64□□□□□ -0.39
SCRT1-201ENST00000569446 A0A1B0GW54 56 aa12.63□□□□□ -0.39
SCRT1-201ENST00000569446 TRAV22A0A0B4J277 110 aa12.62□□□□□ -0.39
SCRT1-201ENST00000569446 C1orf195Q5TG92 126 aa12.62□□□□□ -0.39
SCRT1-201ENST00000569446 PSORS1C2Q9UIG4 136 aa12.61□□□□□ -0.39
SCRT1-201ENST00000569446 SPAG11AQ6PDA7 123 aa12.6□□□□□ -0.39
SCRT1-201ENST00000569446 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
SCRT1-201ENST00000569446 A0A087WTM6 91 aa12.57□□□□□ -0.4
SCRT1-201ENST00000569446 ZNF706Q9Y5V0 76 aaPredicted RBP12.54□□□□□ -0.4
SCRT1-201ENST00000569446 PMAIP1Q13794 54 aa12.51□□□□□ -0.41
SCRT1-201ENST00000569446 FBN3Q75N90 2809 aa12.51□□□□□ -0.41
SCRT1-201ENST00000569446 SPACA4Q8TDM5 124 aa12.47□□□□□ -0.41
SCRT1-201ENST00000569446 C4orf48Q5BLP8 95 aa12.46□□□□□ -0.41
SCRT1-201ENST00000569446 C8orf17Q9NRJ1 99 aa12.46□□□□□ -0.41
SCRT1-201ENST00000569446 COA5Q86WW8 74 aa12.44□□□□□ -0.42
SCRT1-201ENST00000569446 LINC00472Q9H8W2 130 aa12.43□□□□□ -0.42
SCRT1-201ENST00000569446 ZNF861PO60384 105 aa12.41□□□□□ -0.42
SCRT1-201ENST00000569446 V9GYY9 64 aa12.4□□□□□ -0.42
SCRT1-201ENST00000569446 IGKV2D-30A0A075B6S6 120 aa12.4□□□□□ -0.43
SCRT1-201ENST00000569446 IGKV2-30P06310 120 aa12.4□□□□□ -0.43
SCRT1-201ENST00000569446 SPINK1P00995 79 aa12.39□□□□□ -0.43
SCRT1-201ENST00000569446 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
SCRT1-201ENST00000569446 MRPL34Q9BQ48 92 aaKnown RBP12.37□□□□□ -0.43
SCRT1-201ENST00000569446 A0A1B0GVX0 72 aa12.37□□□□□ -0.43
SCRT1-201ENST00000569446 A0A087X002 238 aa12.37□□□□□ -0.43
SCRT1-201ENST00000569446 NOTCH2NLQ7Z3S9 236 aa12.37□□□□□ -0.43
SCRT1-201ENST00000569446 ANK2Q01484 3957 aa12.36□□□□□ -0.43
SCRT1-201ENST00000569446 A8MU10 97 aa12.32□□□□□ -0.44
SCRT1-201ENST00000569446 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
SCRT1-201ENST00000569446 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
SCRT1-201ENST00000569446 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
SCRT1-201ENST00000569446 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
SCRT1-201ENST00000569446 ZCCHC13Q8WW36 166 aaKnown RBP12.28□□□□□ -0.44
SCRT1-201ENST00000569446 MEGF8Q7Z7M0 2845 aa12.28□□□□□ -0.44
SCRT1-201ENST00000569446 CD164Q04900 197 aa12.27□□□□□ -0.45
SCRT1-201ENST00000569446 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
SCRT1-201ENST00000569446 IGLV7-43P04211 117 aa12.26□□□□□ -0.45
SCRT1-201ENST00000569446 SPRR1BP22528 89 aa12.24□□□□□ -0.45
SCRT1-201ENST00000569446 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
SCRT1-201ENST00000569446 H3BPC8 53 aa12.24□□□□□ -0.45
SCRT1-201ENST00000569446 LINC00313P59037 77 aa12.23□□□□□ -0.45
SCRT1-201ENST00000569446 SMR3BP02814 79 aaPredicted RBP12.23□□□□□ -0.45
SCRT1-201ENST00000569446 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
SCRT1-201ENST00000569446 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.45
SCRT1-201ENST00000569446 Q8N9P0 234 aaPredicted RBP12.2□□□□□ -0.46
SCRT1-201ENST00000569446 CYP4F30PQ9H0H9 118 aa12.2□□□□□ -0.46
SCRT1-201ENST00000569446 Q1T7F1 81 aa12.19□□□□□ -0.46
SCRT1-201ENST00000569446 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
SCRT1-201ENST00000569446 DNAH10Q8IVF4 4471 aa12.18□□□□□ -0.46
SCRT1-201ENST00000569446 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms