RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FAM19A1Q7Z5A9 133 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 OBSCN-AS1Q96MR7 158 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 LAMTOR3Q9UHA4 124 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 LYSTQ99698 3801 aa3.82□□□□□ -1.8
CAPN3-218ENST00000568153 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 H0Y9J4 135 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 ACYP1P07311 99 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
CAPN3-218ENST00000568153 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 Q9BRP9 147 aa3.81□□□□□ -1.8
CAPN3-218ENST00000568153 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
CAPN3-218ENST00000568153 BCE1O60756 84 aa3.8□□□□□ -1.8
CAPN3-218ENST00000568153 NDUFV3P56181 108 aaKnown RBP3.8□□□□□ -1.8
CAPN3-218ENST00000568153 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
CAPN3-218ENST00000568153 SMCR5Q8TEV8 140 aa3.8□□□□□ -1.8
CAPN3-218ENST00000568153 RYR1P21817 5038 aa3.8□□□□□ -1.8
CAPN3-218ENST00000568153 ERC2-IT1O76042 136 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 CCKP06307 115 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 PDE6GP18545 87 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 UBE2AP49459 152 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 Q8N377 158 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 DSCR8Q96T75 97 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
CAPN3-218ENST00000568153 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
CAPN3-218ENST00000568153 FAM240AA0A1B0GVK7 77 aa3.78□□□□□ -1.8
CAPN3-218ENST00000568153 ST20-AS1Q8NBB2 130 aa3.78□□□□□ -1.8
CAPN3-218ENST00000568153 SIGMAR1Q99720 223 aa3.78□□□□□ -1.8
CAPN3-218ENST00000568153 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
CAPN3-218ENST00000568153 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 LOC110117498A0A087WWA1 95 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 A0A1B0GV72 72 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 PRLHP81277 87 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 CIRBP-AS1Q8TBR5 109 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 PSORS1C2Q9UIG4 136 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 KMT2AQ03164 3969 aa3.77□□□□□ -1.81
CAPN3-218ENST00000568153 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
CAPN3-218ENST00000568153 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
CAPN3-218ENST00000568153 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
CAPN3-218ENST00000568153 ZNF861PO60384 105 aa3.75□□□□□ -1.81
CAPN3-218ENST00000568153 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CAPN3-218ENST00000568153 Q6ZQT0 140 aa3.75□□□□□ -1.81
CAPN3-218ENST00000568153 Q6ZSA8 131 aa3.75□□□□□ -1.81
CAPN3-218ENST00000568153 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
CAPN3-218ENST00000568153 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
CAPN3-218ENST00000568153 F8WEM9 126 aa3.74□□□□□ -1.81
CAPN3-218ENST00000568153 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 SPRR1BP22528 89 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 SCXQ7RTU7 201 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 C3orf22Q8N5N4 141 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
CAPN3-218ENST00000568153 HYDINQ4G0P3 5121 aa3.73□□□□□ -1.81
CAPN3-218ENST00000568153 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 A0A087X002 238 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 A0A1B0GW54 56 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 UBL5Q9BZL1 73 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
CAPN3-218ENST00000568153 DNAH6Q9C0G6 4158 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 XGP55808 180 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 Q6JHZ5 121 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
CAPN3-218ENST00000568153 SPRR4Q96PI1 79 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 DNAH2Q9P225 4427 aa3.71□□□□□ -1.82
CAPN3-218ENST00000568153 LINC00483Q53H64 154 aa3.7□□□□□ -1.82
CAPN3-218ENST00000568153 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
CAPN3-218ENST00000568153 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
CAPN3-218ENST00000568153 HAMPP81172 84 aa3.69□□□□□ -1.82
CAPN3-218ENST00000568153 NREPQ16612 68 aa3.69□□□□□ -1.82
CAPN3-218ENST00000568153 CRYGAP11844 174 aa3.68□□□□□ -1.82
CAPN3-218ENST00000568153 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
CAPN3-218ENST00000568153 IGFL1Q6UW32 110 aa3.68□□□□□ -1.82
CAPN3-218ENST00000568153 Q8NBF4 154 aa3.68□□□□□ -1.82
CAPN3-218ENST00000568153 IMUPQ9GZP8 106 aa3.68□□□□□ -1.82
CAPN3-218ENST00000568153 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
CAPN3-218ENST00000568153 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
CAPN3-218ENST00000568153 SCGB1A1P11684 91 aa3.67□□□□□ -1.82
CAPN3-218ENST00000568153 Q6ZVQ6 151 aa3.67□□□□□ -1.82
CAPN3-218ENST00000568153 RYR2Q92736 4967 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 HERC2O95714 4834 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 TRBV7-7A0A0K0K1E9 115 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 ATP5EP2Q5VTU8 51 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 Q6Q795 121 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 ANAPC11Q9NYG5 84 aa3.66□□□□□ -1.82
CAPN3-218ENST00000568153 A0A0G2JQZ4 141 aa3.65□□□□□ -1.83
CAPN3-218ENST00000568153 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
CAPN3-218ENST00000568153 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
CAPN3-218ENST00000568153 CXCL6P80162 114 aa3.64□□□□□ -1.83
CAPN3-218ENST00000568153 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
CAPN3-218ENST00000568153 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms