RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
GTF3C1-206ENST00000566779 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
GTF3C1-206ENST00000566779 Q75L30 129 aa5.68□□□□□ -1.5
GTF3C1-206ENST00000566779 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
GTF3C1-206ENST00000566779 H7C2G1 150 aa5.67□□□□□ -1.5
GTF3C1-206ENST00000566779 Q6ZVH6 145 aa5.67□□□□□ -1.5
GTF3C1-206ENST00000566779 C12orf57Q99622 126 aa5.67□□□□□ -1.5
GTF3C1-206ENST00000566779 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 C5orf52A6NGY3 159 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 SPRR1BP22528 89 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 SMIM11BQ8TCY0 68 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
GTF3C1-206ENST00000566779 A0A0G2JQZ4 141 aa5.65□□□□□ -1.5
GTF3C1-206ENST00000566779 A4D1N5 150 aa5.64□□□□□ -1.51
GTF3C1-206ENST00000566779 MUC2Q02817 5179 aa5.64□□□□□ -1.51
GTF3C1-206ENST00000566779 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
GTF3C1-206ENST00000566779 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
GTF3C1-206ENST00000566779 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
GTF3C1-206ENST00000566779 PRO1933Q9H354 126 aa5.63□□□□□ -1.51
GTF3C1-206ENST00000566779 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
GTF3C1-206ENST00000566779 F8WEM9 126 aa5.62□□□□□ -1.51
GTF3C1-206ENST00000566779 VAMP3Q15836 100 aa5.62□□□□□ -1.51
GTF3C1-206ENST00000566779 LINC01547P58512 204 aaPredicted RBP5.6□□□□□ -1.51
GTF3C1-206ENST00000566779 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
GTF3C1-206ENST00000566779 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
GTF3C1-206ENST00000566779 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
GTF3C1-206ENST00000566779 Q6ZQY7 126 aa5.59□□□□□ -1.51
GTF3C1-206ENST00000566779 COX8AP10176 69 aa5.58□□□□□ -1.52
GTF3C1-206ENST00000566779 C14orf144Q96I85 54 aa5.58□□□□□ -1.52
GTF3C1-206ENST00000566779 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
GTF3C1-206ENST00000566779 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
GTF3C1-206ENST00000566779 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
GTF3C1-206ENST00000566779 LINC00575Q6W349 94 aa5.57□□□□□ -1.52
GTF3C1-206ENST00000566779 RAB37Q96AX2 223 aa5.57□□□□□ -1.52
GTF3C1-206ENST00000566779 CD164Q04900 197 aa5.56□□□□□ -1.52
GTF3C1-206ENST00000566779 VAMP8Q9BV40 100 aa5.56□□□□□ -1.52
GTF3C1-206ENST00000566779 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
GTF3C1-206ENST00000566779 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
GTF3C1-206ENST00000566779 BVES-AS1Q5T3Y7 98 aa5.54□□□□□ -1.52
GTF3C1-206ENST00000566779 TCL1BO95988 128 aa5.53□□□□□ -1.52
GTF3C1-206ENST00000566779 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
GTF3C1-206ENST00000566779 C1orf195Q5TG92 126 aa5.53□□□□□ -1.52
GTF3C1-206ENST00000566779 H3BUT2 72 aa5.52□□□□□ -1.53
GTF3C1-206ENST00000566779 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
GTF3C1-206ENST00000566779 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 DLEU1O43261 78 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 CFC1P0CG37 223 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
GTF3C1-206ENST00000566779 Q6JHZ5 121 aa5.5□□□□□ -1.53
GTF3C1-206ENST00000566779 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
GTF3C1-206ENST00000566779 SNCGO76070 127 aa5.49□□□□□ -1.53
GTF3C1-206ENST00000566779 OCIAD2Q56VL3 154 aa5.49□□□□□ -1.53
GTF3C1-206ENST00000566779 HIGD1BQ9P298 99 aa5.49□□□□□ -1.53
GTF3C1-206ENST00000566779 A0A0B4J2C4 111 aa5.48□□□□□ -1.53
GTF3C1-206ENST00000566779 TRBV7-7A0A0K0K1E9 115 aa5.48□□□□□ -1.53
GTF3C1-206ENST00000566779 Q5XG85 94 aa5.48□□□□□ -1.53
GTF3C1-206ENST00000566779 A0A1B0GV72 72 aa5.47□□□□□ -1.53
GTF3C1-206ENST00000566779 CEND1Q8N111 149 aa5.47□□□□□ -1.53
GTF3C1-206ENST00000566779 FAM218AQ96MZ4 157 aa5.47□□□□□ -1.53
GTF3C1-206ENST00000566779 FABP2P12104 132 aa5.46□□□□□ -1.54
GTF3C1-206ENST00000566779 FXYD2P54710 66 aa5.46□□□□□ -1.54
GTF3C1-206ENST00000566779 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
GTF3C1-206ENST00000566779 H0YGX0 51 aa5.45□□□□□ -1.54
GTF3C1-206ENST00000566779 K7ERJ3 54 aa5.45□□□□□ -1.54
GTF3C1-206ENST00000566779 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
GTF3C1-206ENST00000566779 PRO1854Q9UHT4 67 aa5.45□□□□□ -1.54
GTF3C1-206ENST00000566779 PSMB2P49721 201 aa5.44□□□□□ -1.54
GTF3C1-206ENST00000566779 LST1O00453 97 aa5.43□□□□□ -1.54
GTF3C1-206ENST00000566779 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
GTF3C1-206ENST00000566779 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
GTF3C1-206ENST00000566779 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
GTF3C1-206ENST00000566779 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
GTF3C1-206ENST00000566779 HSD52Q0P140 79 aa5.42□□□□□ -1.54
GTF3C1-206ENST00000566779 PYY3Q5JQD4 70 aa5.42□□□□□ -1.54
GTF3C1-206ENST00000566779 H3BMG7 143 aa5.41□□□□□ -1.54
GTF3C1-206ENST00000566779 DNAL4O96015 105 aa5.41□□□□□ -1.54
GTF3C1-206ENST00000566779 A0A087WSZ3 146 aa5.4□□□□□ -1.54
GTF3C1-206ENST00000566779 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
GTF3C1-206ENST00000566779 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
GTF3C1-206ENST00000566779 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.54
GTF3C1-206ENST00000566779 IGKV2-30P06310 120 aa5.39□□□□□ -1.55
GTF3C1-206ENST00000566779 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
GTF3C1-206ENST00000566779 Q96NJ1 140 aa5.38□□□□□ -1.55
GTF3C1-206ENST00000566779 A0A1B0GX51 115 aa5.37□□□□□ -1.55
GTF3C1-206ENST00000566779 TEN1Q86WV5 123 aa5.37□□□□□ -1.55
GTF3C1-206ENST00000566779 ORMDL1Q9P0S3 153 aa5.37□□□□□ -1.55
GTF3C1-206ENST00000566779 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
GTF3C1-206ENST00000566779 COX6CP09669 75 aa5.36□□□□□ -1.55
GTF3C1-206ENST00000566779 Q6Q795 121 aa5.36□□□□□ -1.55
GTF3C1-206ENST00000566779 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
GTF3C1-206ENST00000566779 M0R2T5 61 aa5.35□□□□□ -1.55
GTF3C1-206ENST00000566779 ANKRD29Q8N6D5 301 aa5.35□□□□□ -1.55
GTF3C1-206ENST00000566779 SCGB1C2P0DMR2 95 aa5.34□□□□□ -1.55
GTF3C1-206ENST00000566779 DSCR10P59022 87 aa5.34□□□□□ -1.55
GTF3C1-206ENST00000566779 MT1HP80294 61 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms