RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MYH4Q9Y623 1939 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 H7BZZ5 65 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 ALKAL2Q6UX46 152 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 BAGE2Q86Y30 109 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 FAM223AQ8IWN6 122 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 HIGD1BQ9P298 99 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
HERPUD1-211ENST00000566550 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
HERPUD1-211ENST00000566550 C10orf142B7Z368 130 aa1.38□□□□□ -2.19
HERPUD1-211ENST00000566550 LY6G6CO95867 125 aa1.38□□□□□ -2.19
HERPUD1-211ENST00000566550 GNGT1P63211 74 aa1.38□□□□□ -2.19
HERPUD1-211ENST00000566550 CSMD3Q7Z407 3707 aa1.38□□□□□ -2.19
HERPUD1-211ENST00000566550 NEBP20929 6669 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 ROS1P08922 2347 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 FAM223BA6NKX1 122 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 F2Z2F3 143 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 LYNX1P0DP58 116 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 SMIM11AP58511 58 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 ADIRFQ15847 76 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 PSMG4Q5JS54 123 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 VMO1Q7Z5L0 202 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 PLAC4Q8WY50 150 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 SPCS1Q9Y6A9 102 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 LINC01558Q9Y6Z2 57 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 MYO7BQ6PIF6 2116 aa1.37□□□□□ -2.19
HERPUD1-211ENST00000566550 TRBV25-1A0A075B6N4 114 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 A0A1B0GWA3 101 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 UQCR11O14957 56 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 ZNF137PP52743 207 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 ETDBQ3ZM63 59 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 KRTAP13-1Q8IUC0 172 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 DEFB106AQ8N104 65 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 PRR15LQ9BU68 103 aa1.36□□□□□ -2.19
HERPUD1-211ENST00000566550 C7orf77A4D0Y5 90 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 SAA2P0DJI9 122 aaPredicted RBP1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 C6orf52Q5T4I8 152 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 NCBP2-AS2Q69YL0 99 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 FDCSPQ8NFU4 85 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 RABAC1Q9UI14 185 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 CADP27708 2225 aa1.35□□□□□ -2.19
HERPUD1-211ENST00000566550 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 F8WEM9 126 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 WFDC2Q14508 124 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 SPINK13Q1W4C9 94 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 NMSQ5H8A3 153 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 C10orf99Q6UWK7 81 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
HERPUD1-211ENST00000566550 PLCE1Q9P212 2302 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 MGPP08493 103 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 GCHFRP30047 84 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 SPINT3P49223 89 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 AMELXQ99217 191 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 ST20Q9HBF5 79 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 PSENENQ9NZ42 101 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 WNK2Q9Y3S1 2297 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 KMT2AQ03164 3969 aa1.33□□□□□ -2.2
HERPUD1-211ENST00000566550 LEPROTL1O95214 131 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 Q6ZRX8 168 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 Q6ZSA8 131 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
HERPUD1-211ENST00000566550 A0A087WVE0 104 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 KANTRA0A1W2PQU2 76 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 CCL22O00626 93 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 RPL38P63173 70 aaKnown RBP1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 COX17Q14061 63 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 DEFB107AQ8IZN7 70 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 HUWE1Q7Z6Z7 4374 aaKnown RBP1.31□□□□□ -2.2
HERPUD1-211ENST00000566550 DNAH9Q9NYC9 4486 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 GVQW2A0A096LPI5 108 aaPredicted RBP1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 D6R8Y8 96 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 BCE1O60756 84 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 HMGA1P17096 107 aaKnown RBP1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 S100A3P33764 101 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 HAMPP81172 84 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 DEFB121Q5J5C9 76 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 MUSTN1Q8IVN3 82 aa1.3□□□□□ -2.2
HERPUD1-211ENST00000566550 DNAH7Q8WXX0 4024 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 HSPG2P98160 4391 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 A0A096LNT2 108 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 H3BUT2 72 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 ALMS1Q8TCU4 4167 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 FAT2Q9NYQ8 4349 aa1.29□□□□□ -2.2
HERPUD1-211ENST00000566550 SORL1Q92673 2214 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 MYCBP2O75592 4640 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 IQCF6A8MYZ5 107 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms