RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TIMM17AQ99595 171 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 Q9BRP9 147 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 C2orf88Q9BSF0 95 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 MAP1LC3CQ9BXW4 147 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 SEC11CQ9BY50 192 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 TMEM126AQ9H061 195 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 NXT2Q9NPJ8 142 aaKnown RBP0.55□□□□□ -2.32
SMG1-212ENST00000566328 ERG28Q9UKR5 140 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 CHTOPQ9Y3Y2 248 aaKnown RBP0.55□□□□□ -2.32
SMG1-212ENST00000566328 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 A0A1B0GV72 72 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 ETDCA0A1B0GVM5 59 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 C20orf202A1L168 122 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 H3BRM9 83 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 J3QQQ9 107 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 LEPROTO15243 131 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 HSBP1O75506 76 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 HBDP02042 147 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 G0S2P27469 103 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 RPL28P46779 137 aaKnown RBP0.54□□□□□ -2.32
SMG1-212ENST00000566328 KRTDAPP60985 99 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 SMAGPQ0VAQ4 97 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 RHEBQ15382 184 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 KRTAP19-2Q3LHN2 52 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 S100A7L2Q5SY68 101 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 Q6Q795 121 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 UQCC3Q6UW78 93 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 MUSTN1Q8IVN3 82 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 LINC00337Q8N6G1 96 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 C1orf64Q8NEQ6 169 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 OR13C6PQ8NH95 151 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 SPRR4Q96PI1 79 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 C12orf57Q99622 126 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 KCNQ1DNQ9H478 68 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 NDUFA12Q9UI09 145 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 LAMTOR2Q9Y2Q5 125 aa0.54□□□□□ -2.32
SMG1-212ENST00000566328 A0A0U1RQV1 116 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 MYMXA0A1B0GTQ4 84 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 A6NDN8 102 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 ZNF815PA8K554 130 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SYS1-DBNDD2H3BUS1 97 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 H3BUT2 72 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 ZNF73O43830 326 aaPredicted RBP0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 DPM2O94777 84 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 LEPROTL1O95214 131 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 IGKCP01834 107 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 C3orf79P0CE67 100 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BOP23527 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 DDTP30046 118 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BBP33778 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SPRR1AP35321 89 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 RPL13AP40429 203 aaKnown RBP0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BDP58876 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BCP62807 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SEC11AP67812 179 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 MT1HP80294 61 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 COX17Q14061 63 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 TAL2Q16559 108 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST2H2BEQ16778 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 C6orf99Q4VX62 202 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.53□□□□□ -2.32
SMG1-212ENST00000566328 C9orf153Q5TBE3 101 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SPINT4Q6UDR6 99 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SFTA2Q6UW10 78 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SVBPQ8N300 66 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 SMIM11BQ8TCY0 68 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 LINC00308Q8TCZ7 52 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BHQ93079 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 CHCHD1Q96BP2 118 aaKnown RBP0.53□□□□□ -2.32
SMG1-212ENST00000566328 C14orf144Q96I85 54 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BNQ99877 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HIST1H2BMQ99879 126 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 HSPB8Q9UJY1 196 aa0.53□□□□□ -2.32
SMG1-212ENST00000566328 TRAV9-1A0A075B6T8 112 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 TRAV23DV6A0A075B6W5 121 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 TRAV12-1A0A0B4J245 112 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 LOC107984156A0A0G2JMH3 177 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 M0R2T5 61 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 SPINK1P00995 79 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 COX7BP24311 80 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 NDUFA5Q16718 116 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 ASB16-AS1Q495Z4 193 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 FAM229BQ4G0N7 80 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 LINC01545Q5VT33 79 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.52□□□□□ -2.33
SMG1-212ENST00000566328 Q6ZRX8 168 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 ARL17AQ8IVW1 177 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 OBSCN-AS1Q96MR7 158 aa0.52□□□□□ -2.33
SMG1-212ENST00000566328 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
SMG1-212ENST00000566328 TRBV10-2A0A0K0K1G8 114 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 TEX49A0A1B0GTD5 131 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 K7ERJ3 54 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 SLC25A20O43772 301 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 NDUFC2O95298 119 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 FABP2P12104 132 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 PLNP26678 52 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms