RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SS18L2Q9UHA2 77 aa7.85□□□□□ -1.15
SF3B3-206ENST00000565990 COX7BP24311 80 aa7.84□□□□□ -1.15
SF3B3-206ENST00000565990 ELOF1P60002 83 aaKnown RBP7.84□□□□□ -1.15
SF3B3-206ENST00000565990 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
SF3B3-206ENST00000565990 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
SF3B3-206ENST00000565990 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-206ENST00000565990 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
SF3B3-206ENST00000565990 KRTAP11-1Q8IUC1 163 aa7.83□□□□□ -1.16
SF3B3-206ENST00000565990 LINC00528Q8N1L1 170 aa7.83□□□□□ -1.16
SF3B3-206ENST00000565990 DSCR8Q96T75 97 aa7.83□□□□□ -1.16
SF3B3-206ENST00000565990 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
SF3B3-206ENST00000565990 ZNF73O43830 326 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-206ENST00000565990 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
SF3B3-206ENST00000565990 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
SF3B3-206ENST00000565990 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
SF3B3-206ENST00000565990 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
SF3B3-206ENST00000565990 IGLV1-50A0A075B6I6 118 aa7.8□□□□□ -1.16
SF3B3-206ENST00000565990 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
SF3B3-206ENST00000565990 A0A1B0GW54 56 aa7.8□□□□□ -1.16
SF3B3-206ENST00000565990 CXCL6P80162 114 aa7.8□□□□□ -1.16
SF3B3-206ENST00000565990 LAMTOR3Q9UHA4 124 aa7.8□□□□□ -1.16
SF3B3-206ENST00000565990 TRBV7-4A0A0J9YYF1 115 aa7.79□□□□□ -1.16
SF3B3-206ENST00000565990 Q6ZQY7 126 aa7.79□□□□□ -1.16
SF3B3-206ENST00000565990 VPS13BQ7Z7G8 4022 aa7.79□□□□□ -1.16
SF3B3-206ENST00000565990 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
SF3B3-206ENST00000565990 Q5VSD8 79 aa7.78□□□□□ -1.16
SF3B3-206ENST00000565990 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
SF3B3-206ENST00000565990 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
SF3B3-206ENST00000565990 TMEM258P61165 79 aa7.77□□□□□ -1.17
SF3B3-206ENST00000565990 RPL37AP61513 92 aaKnown RBP7.77□□□□□ -1.17
SF3B3-206ENST00000565990 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
SF3B3-206ENST00000565990 UBE2BP63146 152 aa7.76□□□□□ -1.17
SF3B3-206ENST00000565990 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
SF3B3-206ENST00000565990 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
SF3B3-206ENST00000565990 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
SF3B3-206ENST00000565990 ABCA13Q86UQ4 5058 aa7.74□□□□□ -1.17
SF3B3-206ENST00000565990 SPRR1AP35321 89 aa7.73□□□□□ -1.17
SF3B3-206ENST00000565990 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
SF3B3-206ENST00000565990 Q6ZVQ6 151 aa7.73□□□□□ -1.17
SF3B3-206ENST00000565990 PRYO14603 147 aa7.72□□□□□ -1.17
SF3B3-206ENST00000565990 LCE2BO14633 110 aa7.72□□□□□ -1.17
SF3B3-206ENST00000565990 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
SF3B3-206ENST00000565990 TRAV7A0A075B6U4 112 aa7.71□□□□□ -1.18
SF3B3-206ENST00000565990 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-206ENST00000565990 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-206ENST00000565990 REG3GQ6UW15 175 aa7.71□□□□□ -1.18
SF3B3-206ENST00000565990 DHRS4-AS1Q9P1J3 65 aa7.71□□□□□ -1.18
SF3B3-206ENST00000565990 J3KT08 172 aa7.7□□□□□ -1.18
SF3B3-206ENST00000565990 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
SF3B3-206ENST00000565990 A0A087WVE0 104 aa7.69□□□□□ -1.18
SF3B3-206ENST00000565990 H0Y9J4 135 aa7.69□□□□□ -1.18
SF3B3-206ENST00000565990 SPINK6Q6UWN8 80 aa7.69□□□□□ -1.18
SF3B3-206ENST00000565990 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
SF3B3-206ENST00000565990 ZNF861PO60384 105 aa7.68□□□□□ -1.18
SF3B3-206ENST00000565990 FAM19A1Q7Z5A9 133 aa7.67□□□□□ -1.18
SF3B3-206ENST00000565990 IGLV5-48A0A075B6I7 105 aa7.66□□□□□ -1.18
SF3B3-206ENST00000565990 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
SF3B3-206ENST00000565990 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.18
SF3B3-206ENST00000565990 NDUFC1O43677 76 aa7.64□□□□□ -1.19
SF3B3-206ENST00000565990 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
SF3B3-206ENST00000565990 Q6ZRX8 168 aa7.63□□□□□ -1.19
SF3B3-206ENST00000565990 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
SF3B3-206ENST00000565990 UBE2AP49459 152 aa7.61□□□□□ -1.19
SF3B3-206ENST00000565990 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-206ENST00000565990 PRLHP81277 87 aa7.61□□□□□ -1.19
SF3B3-206ENST00000565990 NREPQ16612 68 aa7.59□□□□□ -1.19
SF3B3-206ENST00000565990 Q8N377 158 aa7.59□□□□□ -1.19
SF3B3-206ENST00000565990 Q9BRP9 147 aa7.59□□□□□ -1.19
SF3B3-206ENST00000565990 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
SF3B3-206ENST00000565990 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
SF3B3-206ENST00000565990 KRTAP1-4P0C5Y4 121 aa7.56□□□□□ -1.2
SF3B3-206ENST00000565990 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
SF3B3-206ENST00000565990 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-206ENST00000565990 KRTAP29-1A8MX34 341 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-206ENST00000565990 OXTP01178 125 aa7.55□□□□□ -1.2
SF3B3-206ENST00000565990 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
SF3B3-206ENST00000565990 Q8NBF4 154 aa7.55□□□□□ -1.2
SF3B3-206ENST00000565990 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
SF3B3-206ENST00000565990 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
SF3B3-206ENST00000565990 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
SF3B3-206ENST00000565990 BPY2O14599 106 aa7.54□□□□□ -1.2
SF3B3-206ENST00000565990 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
SF3B3-206ENST00000565990 IGKV4-1P06312 121 aa7.53□□□□□ -1.2
SF3B3-206ENST00000565990 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
SF3B3-206ENST00000565990 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
SF3B3-206ENST00000565990 H7BZZ5 65 aa7.52□□□□□ -1.21
SF3B3-206ENST00000565990 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
SF3B3-206ENST00000565990 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
SF3B3-206ENST00000565990 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
SF3B3-206ENST00000565990 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
SF3B3-206ENST00000565990 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-206ENST00000565990 F8WEM9 126 aa7.49□□□□□ -1.21
SF3B3-206ENST00000565990 A0A1W2PNM2 257 aa7.48□□□□□ -1.21
SF3B3-206ENST00000565990 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
SF3B3-206ENST00000565990 SPRR1BP22528 89 aa7.48□□□□□ -1.21
SF3B3-206ENST00000565990 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
SF3B3-206ENST00000565990 OCR1Q9BZK8 76 aa7.48□□□□□ -1.21
SF3B3-206ENST00000565990 DEFB105AQ8NG35 78 aa7.47□□□□□ -1.21
SF3B3-206ENST00000565990 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
SF3B3-206ENST00000565990 PRR26Q8N8Z3 221 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms