RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 LCE6AA0A183 80 aa9.77□□□□□ -0.85
GTF3C1-205ENST00000564747 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
GTF3C1-205ENST00000564747 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
GTF3C1-205ENST00000564747 COL7A1Q02388 2944 aa9.75□□□□□ -0.85
GTF3C1-205ENST00000564747 DEFB116Q30KQ4 102 aa9.75□□□□□ -0.85
GTF3C1-205ENST00000564747 STAB2Q8WWQ8 2551 aa9.74□□□□□ -0.85
GTF3C1-205ENST00000564747 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
GTF3C1-205ENST00000564747 MGAM2Q2M2H8 2515 aa9.73□□□□□ -0.85
GTF3C1-205ENST00000564747 hDV103S1A0JD37 113 aa9.72□□□□□ -0.85
GTF3C1-205ENST00000564747 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.85
GTF3C1-205ENST00000564747 PSCAO43653 123 aa9.71□□□□□ -0.85
GTF3C1-205ENST00000564747 TENM2Q9NT68 2774 aa9.71□□□□□ -0.85
GTF3C1-205ENST00000564747 CNBPP62633 177 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-205ENST00000564747 KRTAP11-1Q8IUC1 163 aa9.7□□□□□ -0.86
GTF3C1-205ENST00000564747 ZCCHC13Q8WW36 166 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-205ENST00000564747 DNAH7Q8WXX0 4024 aa9.7□□□□□ -0.86
GTF3C1-205ENST00000564747 A0A087WSZ3 146 aa9.69□□□□□ -0.86
GTF3C1-205ENST00000564747 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
GTF3C1-205ENST00000564747 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
GTF3C1-205ENST00000564747 C1orf64Q8NEQ6 169 aa9.69□□□□□ -0.86
GTF3C1-205ENST00000564747 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
GTF3C1-205ENST00000564747 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-205ENST00000564747 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
GTF3C1-205ENST00000564747 UBE2AP49459 152 aa9.65□□□□□ -0.86
GTF3C1-205ENST00000564747 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
GTF3C1-205ENST00000564747 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-205ENST00000564747 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
GTF3C1-205ENST00000564747 PRR4Q16378 134 aa9.62□□□□□ -0.87
GTF3C1-205ENST00000564747 Q1T7F1 81 aa9.62□□□□□ -0.87
GTF3C1-205ENST00000564747 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
GTF3C1-205ENST00000564747 APLNQ9ULZ1 77 aa9.61□□□□□ -0.87
GTF3C1-205ENST00000564747 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
GTF3C1-205ENST00000564747 PLECQ15149 4684 aaKnown RBP9.6□□□□□ -0.87
GTF3C1-205ENST00000564747 NDUFB1O75438 58 aa9.6□□□□□ -0.87
GTF3C1-205ENST00000564747 MP68P56378 58 aa9.58□□□□□ -0.88
GTF3C1-205ENST00000564747 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
GTF3C1-205ENST00000564747 DYNC2H1Q8NCM8 4307 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-205ENST00000564747 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
GTF3C1-205ENST00000564747 H0Y9J4 135 aa9.56□□□□□ -0.88
GTF3C1-205ENST00000564747 SPRR1BP22528 89 aa9.56□□□□□ -0.88
GTF3C1-205ENST00000564747 PANO1I0J062 215 aa9.55□□□□□ -0.88
GTF3C1-205ENST00000564747 PSPHP1O15172 72 aa9.55□□□□□ -0.88
GTF3C1-205ENST00000564747 KRTAP29-1A8MX34 341 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-205ENST00000564747 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
GTF3C1-205ENST00000564747 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
GTF3C1-205ENST00000564747 LINC00472Q9H8W2 130 aa9.52□□□□□ -0.89
GTF3C1-205ENST00000564747 PRR15Q8IV56 129 aa9.52□□□□□ -0.89
GTF3C1-205ENST00000564747 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
GTF3C1-205ENST00000564747 B9D2Q9BPU9 175 aa9.51□□□□□ -0.89
GTF3C1-205ENST00000564747 V9GYY9 64 aa9.49□□□□□ -0.89
GTF3C1-205ENST00000564747 A8MWP4 228 aa9.49□□□□□ -0.89
GTF3C1-205ENST00000564747 NBDYA0A0U1RRE5 68 aa9.48□□□□□ -0.89
GTF3C1-205ENST00000564747 H0Y9P7 68 aa9.48□□□□□ -0.89
GTF3C1-205ENST00000564747 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
GTF3C1-205ENST00000564747 MDFIQ99750 246 aa9.46□□□□□ -0.89
GTF3C1-205ENST00000564747 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-205ENST00000564747 A8MUN3 132 aa9.45□□□□□ -0.9
GTF3C1-205ENST00000564747 H3BPC8 53 aa9.45□□□□□ -0.9
GTF3C1-205ENST00000564747 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
GTF3C1-205ENST00000564747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-205ENST00000564747 IGLV9-49A0A0B4J1Y8 123 aa9.43□□□□□ -0.9
GTF3C1-205ENST00000564747 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
GTF3C1-205ENST00000564747 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
GTF3C1-205ENST00000564747 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
GTF3C1-205ENST00000564747 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.91
GTF3C1-205ENST00000564747 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.91
GTF3C1-205ENST00000564747 DNHD1Q96M86 4753 aa9.39□□□□□ -0.91
GTF3C1-205ENST00000564747 Q5VV11 94 aa9.38□□□□□ -0.91
GTF3C1-205ENST00000564747 Q96NJ1 140 aa9.37□□□□□ -0.91
GTF3C1-205ENST00000564747 PMAIP1Q13794 54 aa9.37□□□□□ -0.91
GTF3C1-205ENST00000564747 VPS13DQ5THJ4 4388 aa9.37□□□□□ -0.91
GTF3C1-205ENST00000564747 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
GTF3C1-205ENST00000564747 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-205ENST00000564747 LIMD2Q9BT23 127 aa9.35□□□□□ -0.91
GTF3C1-205ENST00000564747 KMT2AQ03164 3969 aa9.34□□□□□ -0.91
GTF3C1-205ENST00000564747 SEC61GP60059 68 aa9.33□□□□□ -0.92
GTF3C1-205ENST00000564747 MOBPQ13875 183 aa9.33□□□□□ -0.92
GTF3C1-205ENST00000564747 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
GTF3C1-205ENST00000564747 CHKB-CPT1BH3BT56 60 aa9.32□□□□□ -0.92
GTF3C1-205ENST00000564747 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
GTF3C1-205ENST00000564747 A0A087WTM6 91 aa9.32□□□□□ -0.92
GTF3C1-205ENST00000564747 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
GTF3C1-205ENST00000564747 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
GTF3C1-205ENST00000564747 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
GTF3C1-205ENST00000564747 A8MU10 97 aa9.31□□□□□ -0.92
GTF3C1-205ENST00000564747 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
GTF3C1-205ENST00000564747 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
GTF3C1-205ENST00000564747 PRKDCP78527 4128 aaKnown RBP9.29□□□□□ -0.92
GTF3C1-205ENST00000564747 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
GTF3C1-205ENST00000564747 COA5Q86WW8 74 aa9.29□□□□□ -0.92
GTF3C1-205ENST00000564747 IGLV7-46A0A075B6I9 117 aa9.28□□□□□ -0.92
GTF3C1-205ENST00000564747 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
GTF3C1-205ENST00000564747 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
GTF3C1-205ENST00000564747 RTL8CO15255 209 aa9.27□□□□□ -0.93
GTF3C1-205ENST00000564747 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
GTF3C1-205ENST00000564747 PCOTHQ58A44 107 aa9.26□□□□□ -0.93
GTF3C1-205ENST00000564747 DNAH17Q9UFH2 4485 aa9.26□□□□□ -0.93
GTF3C1-205ENST00000564747 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
GTF3C1-205ENST00000564747 A0A1B0GVX0 72 aa9.24□□□□□ -0.93
GTF3C1-205ENST00000564747 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms