RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
GDE1-203ENST00000564172 HIGD2AQ9BW72 106 aa11.37□□□□□ -0.59
GDE1-203ENST00000564172 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
GDE1-203ENST00000564172 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
GDE1-203ENST00000564172 Q5VV11 94 aa11.35□□□□□ -0.59
GDE1-203ENST00000564172 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
GDE1-203ENST00000564172 A8MUN3 132 aa11.34□□□□□ -0.59
GDE1-203ENST00000564172 A0A087WTM6 91 aa11.33□□□□□ -0.59
GDE1-203ENST00000564172 A6NN06 94 aa11.33□□□□□ -0.59
GDE1-203ENST00000564172 C16orf90A8MZG2 172 aa11.33□□□□□ -0.6
GDE1-203ENST00000564172 VPREB1P12018 145 aa11.33□□□□□ -0.6
GDE1-203ENST00000564172 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
GDE1-203ENST00000564172 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
GDE1-203ENST00000564172 DIRC1Q969H9 104 aa11.31□□□□□ -0.6
GDE1-203ENST00000564172 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
GDE1-203ENST00000564172 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
GDE1-203ENST00000564172 DNAH6Q9C0G6 4158 aa11.3□□□□□ -0.6
GDE1-203ENST00000564172 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
GDE1-203ENST00000564172 LCA10Q71F78 164 aa11.29□□□□□ -0.6
GDE1-203ENST00000564172 H3BS24 57 aa11.29□□□□□ -0.6
GDE1-203ENST00000564172 ZCCHC13Q8WW36 166 aaKnown RBP11.29□□□□□ -0.6
GDE1-203ENST00000564172 LIMD2Q9BT23 127 aa11.29□□□□□ -0.6
GDE1-203ENST00000564172 IGLV6-57P01721 117 aa11.28□□□□□ -0.6
GDE1-203ENST00000564172 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
GDE1-203ENST00000564172 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
GDE1-203ENST00000564172 SCXQ7RTU7 201 aa11.27□□□□□ -0.61
GDE1-203ENST00000564172 A8MU10 97 aa11.27□□□□□ -0.61
GDE1-203ENST00000564172 A0A096LNI7 61 aa11.26□□□□□ -0.61
GDE1-203ENST00000564172 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
GDE1-203ENST00000564172 HCG22E2RYF7 251 aa11.25□□□□□ -0.61
GDE1-203ENST00000564172 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
GDE1-203ENST00000564172 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
GDE1-203ENST00000564172 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
GDE1-203ENST00000564172 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
GDE1-203ENST00000564172 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
GDE1-203ENST00000564172 RTL8CO15255 209 aa11.22□□□□□ -0.61
GDE1-203ENST00000564172 TNP2Q05952 138 aa11.22□□□□□ -0.61
GDE1-203ENST00000564172 DNAH17Q9UFH2 4485 aa11.22□□□□□ -0.61
GDE1-203ENST00000564172 C6orf99Q4VX62 202 aa11.21□□□□□ -0.61
GDE1-203ENST00000564172 SPTSSBQ8NFR3 76 aa11.2□□□□□ -0.62
GDE1-203ENST00000564172 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
GDE1-203ENST00000564172 ELOF1P60002 83 aaKnown RBP11.2□□□□□ -0.62
GDE1-203ENST00000564172 HYDINQ4G0P3 5121 aa11.19□□□□□ -0.62
GDE1-203ENST00000564172 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
GDE1-203ENST00000564172 NDUFB1O75438 58 aa11.19□□□□□ -0.62
GDE1-203ENST00000564172 COX7BP24311 80 aa11.19□□□□□ -0.62
GDE1-203ENST00000564172 Q75L30 129 aa11.18□□□□□ -0.62
GDE1-203ENST00000564172 A0A1W2PNN7 141 aa11.17□□□□□ -0.62
GDE1-203ENST00000564172 SACSQ9NZJ4 4579 aa11.17□□□□□ -0.62
GDE1-203ENST00000564172 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
GDE1-203ENST00000564172 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
GDE1-203ENST00000564172 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
GDE1-203ENST00000564172 CDC42SE1Q9NRR8 79 aa11.14□□□□□ -0.63
GDE1-203ENST00000564172 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 PANO1I0J062 215 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 FRAS1Q86XX4 4008 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.13□□□□□ -0.63
GDE1-203ENST00000564172 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
GDE1-203ENST00000564172 Q6ZQY7 126 aa11.12□□□□□ -0.63
GDE1-203ENST00000564172 Q8N9L7 120 aa11.12□□□□□ -0.63
GDE1-203ENST00000564172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
GDE1-203ENST00000564172 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
GDE1-203ENST00000564172 KRTAP10-2P60368 255 aa11.09□□□□□ -0.63
GDE1-203ENST00000564172 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
GDE1-203ENST00000564172 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
GDE1-203ENST00000564172 Q9BRP9 147 aa11.09□□□□□ -0.63
GDE1-203ENST00000564172 SMIM29Q86T20 159 aa11.08□□□□□ -0.64
GDE1-203ENST00000564172 PRR15LQ9BU68 103 aa11.08□□□□□ -0.64
GDE1-203ENST00000564172 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
GDE1-203ENST00000564172 DNAH11Q96DT5 4516 aa11.06□□□□□ -0.64
GDE1-203ENST00000564172 A0A1B0GW54 56 aa11.05□□□□□ -0.64
GDE1-203ENST00000564172 A6NED7 52 aa11.05□□□□□ -0.64
GDE1-203ENST00000564172 SPRR1AP35321 89 aa11.05□□□□□ -0.64
GDE1-203ENST00000564172 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
GDE1-203ENST00000564172 KRTAP4-16G5E9R7 235 aaPredicted RBP11.04□□□□□ -0.64
GDE1-203ENST00000564172 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
GDE1-203ENST00000564172 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
GDE1-203ENST00000564172 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
GDE1-203ENST00000564172 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
GDE1-203ENST00000564172 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
GDE1-203ENST00000564172 KRTAP11-1Q8IUC1 163 aa11.01□□□□□ -0.65
GDE1-203ENST00000564172 MOBPQ13875 183 aa11□□□□□ -0.65
GDE1-203ENST00000564172 Q6ZRX8 168 aa10.99□□□□□ -0.65
GDE1-203ENST00000564172 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
GDE1-203ENST00000564172 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
GDE1-203ENST00000564172 PKD1P98161 4303 aa10.97□□□□□ -0.65
GDE1-203ENST00000564172 PRR4Q16378 134 aa10.96□□□□□ -0.66
GDE1-203ENST00000564172 LINC01554Q52M75 96 aa10.96□□□□□ -0.66
GDE1-203ENST00000564172 KRTAP10-1P60331 282 aa10.94□□□□□ -0.66
GDE1-203ENST00000564172 DHRS4-AS1Q9P1J3 65 aa10.93□□□□□ -0.66
GDE1-203ENST00000564172 RYR2Q92736 4967 aa10.92□□□□□ -0.66
GDE1-203ENST00000564172 Q6ZSA8 131 aa10.91□□□□□ -0.66
GDE1-203ENST00000564172 PRLHP81277 87 aa10.9□□□□□ -0.66
GDE1-203ENST00000564172 ST20-AS1Q8NBB2 130 aa10.9□□□□□ -0.66
GDE1-203ENST00000564172 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.66
GDE1-203ENST00000564172 H3BPC8 53 aa10.9□□□□□ -0.66
GDE1-203ENST00000564172 MP68P56378 58 aa10.9□□□□□ -0.66
GDE1-203ENST00000564172 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms