RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HIST1H2BNQ99877 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BMQ99879 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 NUPR1O60356 82 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 LEPROTL1O95214 131 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 NDUFA6P56556 154 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 SFTA2Q6UW10 78 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 ZNF625Q96I27 306 aaPredicted RBP2.59□□□□□ -1.99
LINC00254-201ENST00000563416 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 LST1O00453 97 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 TMEM170BQ5T4T1 132 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
LINC00254-201ENST00000563416 ANKRD29Q8N6D5 301 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 HSPB8Q9UJY1 196 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 A8MUN3 132 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 S100A1P23297 94 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 PLNP26678 52 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 COX17Q14061 63 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 SPINK6Q6UWN8 80 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 ERG28Q9UKR5 140 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 FAM236DA0A1B0GTK5 79 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 DPM2O94777 84 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 IGKCP01834 107 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 MT1HL1P0DM35 61 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 FAM236CP0DP71 79 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 FABP4P15090 132 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 DAND5Q8N907 189 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 C22orf24Q9Y442 160 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 SYS1-DBNDD2H3BUS1 97 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LEPROTO15243 131 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 C1orf137Q5JT78 98 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LINC01545Q5VT33 79 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 Q8NDZ9 215 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LINC01600Q96MT4 127 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 PMCHL2Q9BQD1 86 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LOC107984156A0A0G2JMH3 177 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 MYMXA0A1B0GTQ4 84 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 A0A1B0GU33 70 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 J3QQQ9 107 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 C3orf79P0CE67 100 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 UBE2BP63146 152 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 ARL17AQ8IVW1 177 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 PLEKHB2Q96CS7 222 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 LINC00587B1AMM8 73 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 BCE1O60756 84 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 SMIM13P0DJ93 91 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 LINC00158P58513 81 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 DIRC1Q969H9 104 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 IGKV2D-26A0A0A0MRZ7 120 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 LGALS3P17931 250 aaKnown RBP2.52□□□□□ -2.01
LINC00254-201ENST00000563416 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 MEIG1Q5JSS6 88 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 HIST3H2BBQ8N257 126 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 OR13C6PQ8NH95 151 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 R4GN34 69 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 TRBV10-2A0A0K0K1G8 114 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 A0A1B0GV72 72 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 M0R378 163 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 TIMM17BO60830 172 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 NDUFC2O95298 119 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 SPRR1AP35321 89 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
LINC00254-201ENST00000563416 AKR1D1P51857 326 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 KRTDAPP60985 99 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 HIST1H2BLQ99880 126 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 TMEM126AQ9H061 195 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 C20orf202A1L168 122 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 SOSTDC1Q6X4U4 206 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 KCNQ1DNQ9H478 68 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 LPAP08519 4548 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 LRP2P98164 4655 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 TRBV10-3A0A0K0K1G6 114 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 H3BPC8 53 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 NCR3O14931 201 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 PRLHP81277 87 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 MIEN1Q9BRT3 115 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SPANXDQ9BXN6 97 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 TTTY13Q9BZ97 58 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SPANXCQ9NY87 97 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 IGLV6-57P01721 117 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 Q6Q795 121 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 ATOH7Q8N100 152 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 SMIM20Q8N5G0 67 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 NPC2P61916 151 aa2.47□□□□□ -2.01
LINC00254-201ENST00000563416 HIST1H4AP62805 103 aaKnown RBP2.47□□□□□ -2.01
LINC00254-201ENST00000563416 Q6ZRX8 168 aa2.47□□□□□ -2.01
LINC00254-201ENST00000563416 TRAV23DV6A0A075B6W5 121 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms