RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 C1orf134Q5TEV5 83 aa13.25□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 STARD9Q9P2P6 4700 aa13.24□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 TRAV7A0A075B6U4 112 aa13.23□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 IGFL1Q6UW32 110 aa13.23□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 IGKV4-1P06312 121 aa13.21□□□□□ -0.29
VPS9D1-AS1-202ENST00000562866 KRTAP13-1Q8IUC0 172 aa13.2□□□□□ -0.3
VPS9D1-AS1-202ENST00000562866 LY6G6CO95867 125 aa13.17□□□□□ -0.3
VPS9D1-AS1-202ENST00000562866 IGLV5-52A0A0A0MRZ9 124 aa13.17□□□□□ -0.3
VPS9D1-AS1-202ENST00000562866 Q8N9L7 120 aa13.17□□□□□ -0.3
VPS9D1-AS1-202ENST00000562866 PLAC8Q9NZF1 115 aa13.15□□□□□ -0.3
VPS9D1-AS1-202ENST00000562866 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
VPS9D1-AS1-202ENST00000562866 A0A0G2JQZ4 141 aa13.1□□□□□ -0.31
VPS9D1-AS1-202ENST00000562866 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-AS1-202ENST00000562866 A0A087WSZ3 146 aa13.07□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 C20orf197Q8N268 126 aa13.07□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 DSCR10P59022 87 aa13.07□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 TMEM258P61165 79 aa13.07□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 CYSTM1Q9H1C7 97 aa13.06□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 PSORS1C2Q9UIG4 136 aa13.05□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 LINC00483Q53H64 154 aa13.03□□□□□ -0.32
VPS9D1-AS1-202ENST00000562866 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 RPL37AP61513 92 aaKnown RBP13□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 KLKP1Q107X0 134 aa13□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 K7EQZ3 153 aa12.99□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 ZNF861PO60384 105 aa12.99□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 OCR1Q9BZK8 76 aa12.99□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 DNAH2Q9P225 4427 aa12.98□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 DNAH6Q9C0G6 4158 aa12.97□□□□□ -0.33
VPS9D1-AS1-202ENST00000562866 TGP01266 2768 aa12.95□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 HECTD4Q9Y4D8 3996 aa12.94□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 IGLV9-49A0A0B4J1Y8 123 aa12.94□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 HCG22E2RYF7 251 aa12.93□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 KMT2AQ03164 3969 aa12.93□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 NDUFC1O43677 76 aa12.92□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 DEFB116Q30KQ4 102 aa12.92□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 LINC00472Q9H8W2 130 aa12.91□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 TMEM254Q8TBM7 123 aa12.9□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 SNURFQ9Y675 71 aa12.9□□□□□ -0.34
VPS9D1-AS1-202ENST00000562866 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 J3KT08 172 aa12.89□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 ALMS1Q8TCU4 4167 aa12.89□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 H7BZZ5 65 aa12.88□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 RPS28P62857 69 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 FAM30AQ9NZY2 134 aa12.86□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 A8MWP4 228 aa12.86□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 PRR15Q8IV56 129 aa12.84□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 CIRBP-AS1Q8TBR5 109 aa12.84□□□□□ -0.35
VPS9D1-AS1-202ENST00000562866 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 MOBPQ13875 183 aa12.83□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 A0A0U1RQV1 116 aa12.82□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 SRRM2Q9UQ35 2752 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 LCE6AA0A183 80 aa12.81□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 Q6ZSA8 131 aa12.79□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 WFDC13Q8IUB5 93 aa12.79□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 NDUFB1O75438 58 aa12.78□□□□□ -0.36
VPS9D1-AS1-202ENST00000562866 ANAPC11Q9NYG5 84 aa12.76□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 DNAH8Q96JB1 4490 aa12.76□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 KRTAP29-1A8MX34 341 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 C5orf47Q569G3 176 aa12.76□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 ATP5EP56381 51 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 KRTAP10-1P60331 282 aa12.75□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 HRCT1Q6UXD1 115 aa12.75□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 CASC2Q6XLA1 102 aa12.75□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 Q96NJ1 140 aa12.73□□□□□ -0.37
VPS9D1-AS1-202ENST00000562866 SSBP3-AS1Q7Z2R9 100 aa12.68□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 FRAS1Q86XX4 4008 aa12.67□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 DNAH11Q96DT5 4516 aa12.67□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 CD164Q04900 197 aa12.67□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 SERP1Q9Y6X1 66 aa12.67□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 MMP24-AS1A0A0U1RRL7 71 aa12.66□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 CDK2AP2O75956 126 aa12.65□□□□□ -0.38
VPS9D1-AS1-202ENST00000562866 MP68P56378 58 aa12.64□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 DNAH5Q8TE73 4624 aa12.64□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 ZCCHC13Q8WW36 166 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 hDV103S1A0JD37 113 aa12.61□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 A0A1B0GVX0 72 aa12.6□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 H3BPC8 53 aa12.58□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 C8orf17Q9NRJ1 99 aa12.58□□□□□ -0.39
VPS9D1-AS1-202ENST00000562866 OXTP01178 125 aa12.58□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 ASB16-AS1Q495Z4 193 aa12.56□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 PKD1P98161 4303 aa12.56□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 LINC00336Q6ZUF6 198 aa12.56□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 IGHV6-1A0A0B4J1U7 121 aa12.54□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 H0Y9P7 68 aa12.54□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 TP53AIP1Q9HCN2 124 aa12.53□□□□□ -0.4
VPS9D1-AS1-202ENST00000562866 LINC00208Q96KT6 92 aa12.51□□□□□ -0.41
VPS9D1-AS1-202ENST00000562866 A0A087X002 238 aa12.48□□□□□ -0.41
VPS9D1-AS1-202ENST00000562866 TRAV22A0A0B4J277 110 aa12.47□□□□□ -0.41
VPS9D1-AS1-202ENST00000562866 KRTAP13-2Q52LG2 175 aa12.47□□□□□ -0.41
VPS9D1-AS1-202ENST00000562866 HYDINQ4G0P3 5121 aa12.47□□□□□ -0.41
VPS9D1-AS1-202ENST00000562866 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 MRPL34Q9BQ48 92 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 Q5XG85 94 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms