RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 NAT8BQ9UHF3 227 aa2.64□□□□□ -1.99
UBR1-203ENST00000562173 LINC00862A6NCI5 91 aa2.63□□□□□ -1.99
UBR1-203ENST00000562173 SMIM13P0DJ93 91 aa2.63□□□□□ -1.99
UBR1-203ENST00000562173 ZNF22P17026 224 aaPredicted RBP2.63□□□□□ -1.99
UBR1-203ENST00000562173 HERVK_113P63121 156 aa2.63□□□□□ -1.99
UBR1-203ENST00000562173 IFITM2Q01629 132 aa2.63□□□□□ -1.99
UBR1-203ENST00000562173 GNB1LQ9BYB4 327 aa2.63□□□□□ -1.99
UBR1-203ENST00000562173 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
UBR1-203ENST00000562173 TMEM223A0PJW6 202 aa2.62□□□□□ -1.99
UBR1-203ENST00000562173 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
UBR1-203ENST00000562173 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
UBR1-203ENST00000562173 FAM19A2Q8N3H0 131 aa2.62□□□□□ -1.99
UBR1-203ENST00000562173 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
UBR1-203ENST00000562173 C11orf86A6NJI1 115 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 PPP1R17O96001 155 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 LINC00158P58513 81 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 TOMM6Q96B49 74 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 SIGMAR1Q99720 223 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 CST9LQ9H4G1 147 aa2.61□□□□□ -1.99
UBR1-203ENST00000562173 LGALS3P17931 250 aaKnown RBP2.6□□□□□ -1.99
UBR1-203ENST00000562173 S100A1P23297 94 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 PMAIP1Q13794 54 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 PMCHL1Q16048 86 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 NDUFA5Q16718 116 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 IGFL1Q6UW32 110 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 SCGB3A1Q96QR1 104 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 KCNQ1DNQ9H478 68 aa2.6□□□□□ -1.99
UBR1-203ENST00000562173 KMT2DO14686 5537 aa2.59□□□□□ -1.99
UBR1-203ENST00000562173 TSPEAR-AS2P59090 65 aa2.59□□□□□ -1.99
UBR1-203ENST00000562173 NPC2P61916 151 aa2.59□□□□□ -1.99
UBR1-203ENST00000562173 MIR7-3HGQ8N6C7 128 aa2.59□□□□□ -1.99
UBR1-203ENST00000562173 A0A1B0GV72 72 aa2.58□□□□□ -2
UBR1-203ENST00000562173 IGLC3P0DOY3 106 aa2.58□□□□□ -2
UBR1-203ENST00000562173 NDUFA6P56556 154 aa2.58□□□□□ -2
UBR1-203ENST00000562173 JOSD1Q15040 202 aaPredicted RBP2.58□□□□□ -2
UBR1-203ENST00000562173 LUZP6Q538Z0 58 aa2.58□□□□□ -2
UBR1-203ENST00000562173 SOSTDC1Q6X4U4 206 aa2.58□□□□□ -2
UBR1-203ENST00000562173 ATP5L2Q7Z4Y8 100 aa2.58□□□□□ -2
UBR1-203ENST00000562173 Q6ZRX8 168 aa2.57□□□□□ -2
UBR1-203ENST00000562173 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
UBR1-203ENST00000562173 C20orf166-AS1Q96NR2 134 aa2.57□□□□□ -2
UBR1-203ENST00000562173 F8W036 122 aa2.56□□□□□ -2
UBR1-203ENST00000562173 PPBPP02775 128 aa2.56□□□□□ -2
UBR1-203ENST00000562173 S100A12P80511 92 aa2.56□□□□□ -2
UBR1-203ENST00000562173 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
UBR1-203ENST00000562173 NAT8Q9UHE5 227 aa2.56□□□□□ -2
UBR1-203ENST00000562173 MDN1Q9NU22 5596 aa2.55□□□□□ -2
UBR1-203ENST00000562173 COLCA2A8K830 154 aa2.55□□□□□ -2
UBR1-203ENST00000562173 K7ERS5 55 aa2.54□□□□□ -2
UBR1-203ENST00000562173 HRES1P13985 223 aa2.54□□□□□ -2
UBR1-203ENST00000562173 SEC11AP67812 179 aa2.54□□□□□ -2
UBR1-203ENST00000562173 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
UBR1-203ENST00000562173 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
UBR1-203ENST00000562173 TMEM170BQ5T4T1 132 aa2.54□□□□□ -2
UBR1-203ENST00000562173 TRAV9-1A0A075B6T8 112 aa2.53□□□□□ -2
UBR1-203ENST00000562173 C20orf202A1L168 122 aa2.53□□□□□ -2
UBR1-203ENST00000562173 SPRR1BP22528 89 aa2.53□□□□□ -2
UBR1-203ENST00000562173 LINC00313P59037 77 aa2.53□□□□□ -2
UBR1-203ENST00000562173 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
UBR1-203ENST00000562173 OR13C6PQ8NH95 151 aa2.53□□□□□ -2
UBR1-203ENST00000562173 LIMD2Q9BT23 127 aa2.53□□□□□ -2
UBR1-203ENST00000562173 TRAV23DV6A0A075B6W5 121 aa2.52□□□□□ -2.01
UBR1-203ENST00000562173 H3BRM9 83 aa2.52□□□□□ -2.01
UBR1-203ENST00000562173 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
UBR1-203ENST00000562173 COX17Q14061 63 aa2.52□□□□□ -2.01
UBR1-203ENST00000562173 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
UBR1-203ENST00000562173 NXT2Q9NPJ8 142 aaKnown RBP2.52□□□□□ -2.01
UBR1-203ENST00000562173 FAM236DA0A1B0GTK5 79 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 LINC01546A6NGU7 62 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 FAM236CP0DP71 79 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 S100A2P29034 98 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 BAGE3Q86Y29 109 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 TCTE3Q8IZS6 198 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 Q96NJ1 140 aa2.51□□□□□ -2.01
UBR1-203ENST00000562173 A0A1B0GW54 56 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 ZNF73O43830 326 aaPredicted RBP2.5□□□□□ -2.01
UBR1-203ENST00000562173 S100A8P05109 93 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 MT1BP07438 61 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 ATP11AUNQ6ZP68 121 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 LAMTOR2Q9Y2Q5 125 aa2.5□□□□□ -2.01
UBR1-203ENST00000562173 TSTD3H0UI37 97 aa2.49□□□□□ -2.01
UBR1-203ENST00000562173 SMIM20Q8N5G0 67 aa2.49□□□□□ -2.01
UBR1-203ENST00000562173 ANKRD29Q8N6D5 301 aa2.49□□□□□ -2.01
UBR1-203ENST00000562173 TRAPPC1Q9Y5R8 145 aa2.49□□□□□ -2.01
UBR1-203ENST00000562173 PMCHL2Q9BQD1 86 aa2.48□□□□□ -2.01
UBR1-203ENST00000562173 PRO1933Q9H354 126 aa2.48□□□□□ -2.01
UBR1-203ENST00000562173 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 A8MUU9 505 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 LST1O00453 97 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 S100A7L2Q5SY68 101 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 Q5XG85 94 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 ARL17AQ8IVW1 177 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 LAMTOR3Q9UHA4 124 aa2.47□□□□□ -2.01
UBR1-203ENST00000562173 A8MUN3 132 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 SCGB1A1P11684 91 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 SPRR2EP22531 72 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 SPRR2BP35325 72 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 SPRR2AP35326 72 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms