RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
RAB40C-206ENST00000561781 Q8NBF4 154 aa12.11□□□□□ -0.47
RAB40C-206ENST00000561781 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
RAB40C-206ENST00000561781 PRKDCP78527 4128 aaKnown RBP12.09□□□□□ -0.47
RAB40C-206ENST00000561781 IGLV1-51P01701 117 aa12.09□□□□□ -0.47
RAB40C-206ENST00000561781 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
RAB40C-206ENST00000561781 H3BS24 57 aa12.08□□□□□ -0.48
RAB40C-206ENST00000561781 C1orf137Q5JT78 98 aa12.08□□□□□ -0.48
RAB40C-206ENST00000561781 FBN3Q75N90 2809 aa12.04□□□□□ -0.48
RAB40C-206ENST00000561781 COA5Q86WW8 74 aa12.03□□□□□ -0.48
RAB40C-206ENST00000561781 TNP2Q05952 138 aa12.02□□□□□ -0.48
RAB40C-206ENST00000561781 H0Y9P7 68 aa12.01□□□□□ -0.49
RAB40C-206ENST00000561781 LINC01558Q9Y6Z2 57 aa12□□□□□ -0.49
RAB40C-206ENST00000561781 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 X6R8D5 127 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 C9orf163Q8N9P6 203 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
RAB40C-206ENST00000561781 DHRS4-AS1Q9P1J3 65 aa11.97□□□□□ -0.49
RAB40C-206ENST00000561781 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
RAB40C-206ENST00000561781 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
RAB40C-206ENST00000561781 COL7A1Q02388 2944 aa11.96□□□□□ -0.5
RAB40C-206ENST00000561781 DEFB4AO15263 64 aa11.95□□□□□ -0.5
RAB40C-206ENST00000561781 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
RAB40C-206ENST00000561781 K7EIL1 84 aa11.95□□□□□ -0.5
RAB40C-206ENST00000561781 WFDC10BQ8IUB3 73 aa11.94□□□□□ -0.5
RAB40C-206ENST00000561781 TGP01266 2768 aa11.93□□□□□ -0.5
RAB40C-206ENST00000561781 LINC00313P59037 77 aa11.93□□□□□ -0.5
RAB40C-206ENST00000561781 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
RAB40C-206ENST00000561781 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
RAB40C-206ENST00000561781 IGLV7-46A0A075B6I9 117 aa11.92□□□□□ -0.5
RAB40C-206ENST00000561781 LELP1Q5T871 98 aa11.91□□□□□ -0.5
RAB40C-206ENST00000561781 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
RAB40C-206ENST00000561781 C7orf33Q8WU49 177 aa11.91□□□□□ -0.5
RAB40C-206ENST00000561781 LINC01554Q52M75 96 aa11.9□□□□□ -0.5
RAB40C-206ENST00000561781 DNAH9Q9NYC9 4486 aa11.9□□□□□ -0.5
RAB40C-206ENST00000561781 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
RAB40C-206ENST00000561781 HUWE1Q7Z6Z7 4374 aaKnown RBP11.88□□□□□ -0.51
RAB40C-206ENST00000561781 SPINK7P58062 85 aa11.87□□□□□ -0.51
RAB40C-206ENST00000561781 CNBPP62633 177 aaKnown RBP11.87□□□□□ -0.51
RAB40C-206ENST00000561781 Q6ZRX8 168 aa11.87□□□□□ -0.51
RAB40C-206ENST00000561781 HTN3P15516 51 aa11.83□□□□□ -0.52
RAB40C-206ENST00000561781 PRAC1Q96KF2 57 aa11.82□□□□□ -0.52
RAB40C-206ENST00000561781 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
RAB40C-206ENST00000561781 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
RAB40C-206ENST00000561781 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
RAB40C-206ENST00000561781 SERTAD4-AS1Q5TG53 156 aa11.8□□□□□ -0.52
RAB40C-206ENST00000561781 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
RAB40C-206ENST00000561781 ASB16-AS1Q495Z4 193 aa11.79□□□□□ -0.52
RAB40C-206ENST00000561781 LINC00476Q8WZB0 136 aa11.78□□□□□ -0.52
RAB40C-206ENST00000561781 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.52
RAB40C-206ENST00000561781 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.52
RAB40C-206ENST00000561781 RPL37AP8A6NKH3 93 aa11.76□□□□□ -0.53
RAB40C-206ENST00000561781 PRR26Q8N8Z3 221 aa11.75□□□□□ -0.53
RAB40C-206ENST00000561781 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
RAB40C-206ENST00000561781 A0A0G2JQZ4 141 aa11.73□□□□□ -0.53
RAB40C-206ENST00000561781 A0A1W2PNN7 141 aa11.73□□□□□ -0.53
RAB40C-206ENST00000561781 SPRR1AP35321 89 aa11.73□□□□□ -0.53
RAB40C-206ENST00000561781 IGLV5-37A0A075B6J1 123 aa11.72□□□□□ -0.53
RAB40C-206ENST00000561781 Q8NAQ8 132 aa11.72□□□□□ -0.53
RAB40C-206ENST00000561781 A0A087WSZ3 146 aa11.71□□□□□ -0.53
RAB40C-206ENST00000561781 A0A087X002 238 aa11.71□□□□□ -0.53
RAB40C-206ENST00000561781 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
RAB40C-206ENST00000561781 IGLV1-50A0A075B6I6 118 aa11.7□□□□□ -0.54
RAB40C-206ENST00000561781 ADM2Q7Z4H4 148 aa11.68□□□□□ -0.54
RAB40C-206ENST00000561781 A8MWP4 228 aa11.67□□□□□ -0.54
RAB40C-206ENST00000561781 PCOTHQ58A44 107 aa11.67□□□□□ -0.54
RAB40C-206ENST00000561781 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
RAB40C-206ENST00000561781 FAM168BA1KXE4 195 aa11.66□□□□□ -0.54
RAB40C-206ENST00000561781 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
RAB40C-206ENST00000561781 CSMD3Q7Z407 3707 aa11.64□□□□□ -0.55
RAB40C-206ENST00000561781 HRES1P13985 223 aa11.64□□□□□ -0.55
RAB40C-206ENST00000561781 IGLV8-61A0A075B6I0 122 aa11.62□□□□□ -0.55
RAB40C-206ENST00000561781 RTL8CO15255 209 aa11.59□□□□□ -0.55
RAB40C-206ENST00000561781 TP53AIP1Q9HCN2 124 aa11.59□□□□□ -0.55
RAB40C-206ENST00000561781 LYSTQ99698 3801 aa11.57□□□□□ -0.56
RAB40C-206ENST00000561781 KRTAP7-1Q8IUC3 87 aa11.57□□□□□ -0.56
RAB40C-206ENST00000561781 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
RAB40C-206ENST00000561781 TLX1NBP0CAT3 122 aa11.56□□□□□ -0.56
RAB40C-206ENST00000561781 STARD9Q9P2P6 4700 aa11.56□□□□□ -0.56
RAB40C-206ENST00000561781 MMP24-AS1A0A0U1RRL7 71 aa11.55□□□□□ -0.56
RAB40C-206ENST00000561781 LINC00472Q9H8W2 130 aa11.55□□□□□ -0.56
RAB40C-206ENST00000561781 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
RAB40C-206ENST00000561781 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
RAB40C-206ENST00000561781 Q6ZR54 194 aa11.52□□□□□ -0.56
RAB40C-206ENST00000561781 IGKV2-24A0A0C4DH68 120 aa11.51□□□□□ -0.57
RAB40C-206ENST00000561781 RETNLBQ9BQ08 111 aa11.5□□□□□ -0.57
RAB40C-206ENST00000561781 H0Y9J4 135 aa11.5□□□□□ -0.57
RAB40C-206ENST00000561781 REG3GQ6UW15 175 aa11.49□□□□□ -0.57
RAB40C-206ENST00000561781 PLECQ15149 4684 aaKnown RBP11.47□□□□□ -0.57
RAB40C-206ENST00000561781 SPATA8Q6RVD6 105 aa11.45□□□□□ -0.58
RAB40C-206ENST00000561781 LINC01556Q5JQF7 62 aa11.43□□□□□ -0.58
RAB40C-206ENST00000561781 H3BNG1 76 aa11.41□□□□□ -0.58
RAB40C-206ENST00000561781 PRLHP81277 87 aa11.41□□□□□ -0.58
RAB40C-206ENST00000561781 CSAG1Q6PB30 78 aa11.4□□□□□ -0.58
RAB40C-206ENST00000561781 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
RAB40C-206ENST00000561781 DYNC2H1Q8NCM8 4307 aaKnown RBP11.35□□□□□ -0.59
RAB40C-206ENST00000561781 WWC2-AS2Q96NR7 200 aa11.34□□□□□ -0.59
RAB40C-206ENST00000561781 A0A1B0GU69 56 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms