RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
PTPN9-202ENST00000561731 GNG13Q9P2W3 67 aa1.16□□□□□ -2.22
PTPN9-202ENST00000561731 TRBV20-1A0A075B6N2 111 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 FXYD6-FXYD2A0A087WZ82 144 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 ETDCA0A1B0GVM5 59 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 TEX46H3BTG2 121 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 ARPC5O15511 151 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 NDUFC2O95298 119 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 S100A8P05109 93 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 ZNF22P17026 224 aaPredicted RBP1.15□□□□□ -2.23
PTPN9-202ENST00000561731 SPRR2EP22531 72 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 G0S2P27469 103 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 SPRR2BP35325 72 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 SPRR2AP35326 72 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 JOSD1Q15040 202 aaPredicted RBP1.15□□□□□ -2.23
PTPN9-202ENST00000561731 CST9LQ9H4G1 147 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 CBY1Q9Y3M2 126 aa1.15□□□□□ -2.23
PTPN9-202ENST00000561731 F8W036 122 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 H3BRM9 83 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 SPINK8P0C7L1 97 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 RAB5AP20339 215 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 RAB5BP61020 215 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 RAB14P61106 215 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 PMVKQ15126 192 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 C9orf153Q5TBE3 101 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 TMEM136Q6ZRR5 245 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 ST20-AS1Q8NBB2 130 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 C1orf64Q8NEQ6 169 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 PRELID3AQ96N28 172 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 SPRR2FQ96RM1 72 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 PRO1933Q9H354 126 aa1.14□□□□□ -2.23
PTPN9-202ENST00000561731 NXT2Q9NPJ8 142 aaKnown RBP1.14□□□□□ -2.23
PTPN9-202ENST00000561731 A0A1B0GV50 99 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 H7C2G1 150 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 ZNF73O43830 326 aaPredicted RBP1.13□□□□□ -2.23
PTPN9-202ENST00000561731 ADCYAP1P18509 176 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 DDTP30046 118 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 PFN2P35080 140 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 ELOF1P60002 83 aaKnown RBP1.13□□□□□ -2.23
PTPN9-202ENST00000561731 RPL23P62829 140 aaKnown RBP1.13□□□□□ -2.23
PTPN9-202ENST00000561731 Q6Q795 121 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 SOSTDC1Q6X4U4 206 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 SMIM7Q9BQ49 75 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 MAP1LC3AQ9H492 121 aa1.13□□□□□ -2.23
PTPN9-202ENST00000561731 SPANXB1Q9NS25 103 aaPredicted RBP1.13□□□□□ -2.23
PTPN9-202ENST00000561731 TRBV7-6A0A0J9YX20 115 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 KANTRA0A1W2PQU2 76 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 LINC00587B1AMM8 73 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 TCL1BO95988 128 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 SRP19P09132 144 aaKnown RBP1.12□□□□□ -2.23
PTPN9-202ENST00000561731 SPRR2DP22532 72 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 AKR1D1P51857 326 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 BOD1L2Q8IYS8 172 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 OBSCN-AS1Q96MR7 158 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 RBM12B-AS1Q9P1G2 102 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 LAMTOR3Q9UHA4 124 aa1.12□□□□□ -2.23
PTPN9-202ENST00000561731 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 TRBV7-7A0A0K0K1E9 115 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 TEX49A0A1B0GTD5 131 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 S100A12P80511 92 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 SLC51BQ86UW2 128 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 Q96NJ1 140 aa1.11□□□□□ -2.23
PTPN9-202ENST00000561731 TRAV12-1A0A0B4J245 112 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 LOC389332A0A1B0GUA5 103 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 ZNF815PA8K554 130 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 NCR3O14931 201 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 SMIM13P0DJ93 91 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 Q5VV11 94 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 MRPL54Q6P161 138 aaKnown RBP1.1□□□□□ -2.23
PTPN9-202ENST00000561731 SCGB3A1Q96QR1 104 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 NAT8Q9UHE5 227 aa1.1□□□□□ -2.23
PTPN9-202ENST00000561731 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.23
PTPN9-202ENST00000561731 C9JQL5 133 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 SMLR1H3BR10 107 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 HBDP02042 147 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 LINC00158P58513 81 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 IFITM2Q01629 132 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 MEIG1Q5JSS6 88 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 Q6JHZ5 121 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 HRCT1Q6UXD1 115 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 BAGE3Q86Y29 109 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 TCTE3Q8IZS6 198 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 CLEC2BQ92478 149 aa1.09□□□□□ -2.23
PTPN9-202ENST00000561731 FAM236DA0A1B0GTK5 79 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 FAM236CP0DP71 79 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 TSPEAR-AS2P59090 65 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 KRTAP12-1P59990 96 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 UQCC3Q6UW78 93 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 SPANXA2-OT1Q8N9U9 137 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 SPANXDQ9BXN6 97 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 MAP1LC3CQ9BXW4 147 aa1.08□□□□□ -2.24
PTPN9-202ENST00000561731 MYMXA0A1B0GTQ4 84 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 SEC61GP60059 68 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 MT1XP80297 61 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 ADIRFQ15847 76 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 SPANXCQ9NY87 97 aa1.07□□□□□ -2.24
PTPN9-202ENST00000561731 TIMM17BO60830 172 aa1.06□□□□□ -2.24
PTPN9-202ENST00000561731 HINT1P49773 126 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms