RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CD164Q04900 197 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 SMIM11BQ8TCY0 68 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 HIST1H2BLQ99880 126 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 A4D1N5 150 aa5.63□□□□□ -1.51
CLK3-205ENST00000561673 H7C2G1 150 aa5.63□□□□□ -1.51
CLK3-205ENST00000561673 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
CLK3-205ENST00000561673 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
CLK3-205ENST00000561673 S100A2P29034 98 aa5.62□□□□□ -1.51
CLK3-205ENST00000561673 Q5XG85 94 aa5.61□□□□□ -1.51
CLK3-205ENST00000561673 HSBP1L1C9JCN9 74 aa5.6□□□□□ -1.51
CLK3-205ENST00000561673 NHP2Q9NX24 153 aaKnown RBP5.6□□□□□ -1.51
CLK3-205ENST00000561673 VAMP3Q15836 100 aa5.59□□□□□ -1.51
CLK3-205ENST00000561673 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CLK3-205ENST00000561673 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
CLK3-205ENST00000561673 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
CLK3-205ENST00000561673 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
CLK3-205ENST00000561673 LOC105371267A0A1B0GV96 52 aa5.57□□□□□ -1.52
CLK3-205ENST00000561673 SCGB1D1O95968 90 aa5.57□□□□□ -1.52
CLK3-205ENST00000561673 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
CLK3-205ENST00000561673 hADV29S1A0JD25 119 aa5.56□□□□□ -1.52
CLK3-205ENST00000561673 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
CLK3-205ENST00000561673 Q6ZQY7 126 aa5.55□□□□□ -1.52
CLK3-205ENST00000561673 F8WEM9 126 aa5.54□□□□□ -1.52
CLK3-205ENST00000561673 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
CLK3-205ENST00000561673 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
CLK3-205ENST00000561673 C12orf57Q99622 126 aa5.54□□□□□ -1.52
CLK3-205ENST00000561673 TCL1BO95988 128 aa5.53□□□□□ -1.52
CLK3-205ENST00000561673 COX8AP10176 69 aa5.52□□□□□ -1.53
CLK3-205ENST00000561673 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
CLK3-205ENST00000561673 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
CLK3-205ENST00000561673 BVES-AS1Q5T3Y7 98 aa5.51□□□□□ -1.53
CLK3-205ENST00000561673 Q6JHZ5 121 aa5.51□□□□□ -1.53
CLK3-205ENST00000561673 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
CLK3-205ENST00000561673 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.51□□□□□ -1.53
CLK3-205ENST00000561673 DLEU1O43261 78 aa5.5□□□□□ -1.53
CLK3-205ENST00000561673 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
CLK3-205ENST00000561673 CLEC2BQ92478 149 aa5.5□□□□□ -1.53
CLK3-205ENST00000561673 TRBV7-7A0A0K0K1E9 115 aa5.49□□□□□ -1.53
CLK3-205ENST00000561673 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
CLK3-205ENST00000561673 CFC1P0CG37 223 aa5.49□□□□□ -1.53
CLK3-205ENST00000561673 C14orf144Q96I85 54 aa5.49□□□□□ -1.53
CLK3-205ENST00000561673 MT1HP80294 61 aa5.48□□□□□ -1.53
CLK3-205ENST00000561673 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
CLK3-205ENST00000561673 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
CLK3-205ENST00000561673 SMIM6P0DI80 62 aa5.47□□□□□ -1.53
CLK3-205ENST00000561673 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
CLK3-205ENST00000561673 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
CLK3-205ENST00000561673 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
CLK3-205ENST00000561673 H3BUT2 72 aa5.46□□□□□ -1.54
CLK3-205ENST00000561673 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
CLK3-205ENST00000561673 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
CLK3-205ENST00000561673 HIGD1BQ9P298 99 aa5.46□□□□□ -1.54
CLK3-205ENST00000561673 PAM16Q9Y3D7 125 aa5.46□□□□□ -1.54
CLK3-205ENST00000561673 SPATA45Q537H7 98 aa5.45□□□□□ -1.54
CLK3-205ENST00000561673 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
CLK3-205ENST00000561673 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
CLK3-205ENST00000561673 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
CLK3-205ENST00000561673 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
CLK3-205ENST00000561673 C2orf91Q6ZV80 131 aa5.44□□□□□ -1.54
CLK3-205ENST00000561673 FAM218AQ96MZ4 157 aa5.44□□□□□ -1.54
CLK3-205ENST00000561673 H0YGX0 51 aa5.43□□□□□ -1.54
CLK3-205ENST00000561673 SNCGO76070 127 aa5.43□□□□□ -1.54
CLK3-205ENST00000561673 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
CLK3-205ENST00000561673 LST1O00453 97 aa5.42□□□□□ -1.54
CLK3-205ENST00000561673 PYY3Q5JQD4 70 aa5.42□□□□□ -1.54
CLK3-205ENST00000561673 CEND1Q8N111 149 aa5.42□□□□□ -1.54
CLK3-205ENST00000561673 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
CLK3-205ENST00000561673 NDUFV3P56181 108 aaKnown RBP5.41□□□□□ -1.54
CLK3-205ENST00000561673 Q6Q795 121 aa5.41□□□□□ -1.54
CLK3-205ENST00000561673 Q75L30 129 aa5.4□□□□□ -1.54
CLK3-205ENST00000561673 PRO1854Q9UHT4 67 aa5.4□□□□□ -1.54
CLK3-205ENST00000561673 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
CLK3-205ENST00000561673 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
CLK3-205ENST00000561673 TEN1Q86WV5 123 aa5.39□□□□□ -1.55
CLK3-205ENST00000561673 A0A1B0GX51 115 aa5.38□□□□□ -1.55
CLK3-205ENST00000561673 H3BMG7 143 aa5.38□□□□□ -1.55
CLK3-205ENST00000561673 FXYD2P54710 66 aa5.38□□□□□ -1.55
CLK3-205ENST00000561673 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
CLK3-205ENST00000561673 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
CLK3-205ENST00000561673 SS18L2Q9UHA2 77 aa5.38□□□□□ -1.55
CLK3-205ENST00000561673 M0R2T5 61 aa5.37□□□□□ -1.55
CLK3-205ENST00000561673 FABP2P12104 132 aa5.37□□□□□ -1.55
CLK3-205ENST00000561673 Q96NJ1 140 aa5.37□□□□□ -1.55
CLK3-205ENST00000561673 A0A087WSZ3 146 aa5.36□□□□□ -1.55
CLK3-205ENST00000561673 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
CLK3-205ENST00000561673 TSTD3H0UI37 97 aa5.35□□□□□ -1.55
CLK3-205ENST00000561673 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
CLK3-205ENST00000561673 A0A1W2PNM2 257 aa5.34□□□□□ -1.55
CLK3-205ENST00000561673 C20orf166-AS1Q96NR2 134 aa5.34□□□□□ -1.55
CLK3-205ENST00000561673 A8MUU9 505 aa5.32□□□□□ -1.56
CLK3-205ENST00000561673 K7ERJ3 54 aa5.32□□□□□ -1.56
CLK3-205ENST00000561673 PSMB2P49721 201 aa5.31□□□□□ -1.56
CLK3-205ENST00000561673 HSD52Q0P140 79 aa5.31□□□□□ -1.56
CLK3-205ENST00000561673 ANKRD29Q8N6D5 301 aa5.31□□□□□ -1.56
CLK3-205ENST00000561673 ORMDL1Q9P0S3 153 aa5.31□□□□□ -1.56
CLK3-205ENST00000561673 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
CLK3-205ENST00000561673 A0A1B0GV72 72 aa5.3□□□□□ -1.56
CLK3-205ENST00000561673 DNAL4O96015 105 aa5.3□□□□□ -1.56
CLK3-205ENST00000561673 DSCR10P59022 87 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms