RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 VPS13BQ7Z7G8 4022 aa14.3□□□□□ -0.12
TMEM249-201ENST00000561638 KRTAP4-16G5E9R7 235 aaPredicted RBP14.29□□□□□ -0.12
TMEM249-201ENST00000561638 RPL28P46779 137 aaKnown RBP14.29□□□□□ -0.12
TMEM249-201ENST00000561638 CLEC2BQ92478 149 aa14.28□□□□□ -0.12
TMEM249-201ENST00000561638 Q6ZRX8 168 aa14.27□□□□□ -0.12
TMEM249-201ENST00000561638 ZNF861PO60384 105 aa14.27□□□□□ -0.13
TMEM249-201ENST00000561638 COX7BP24311 80 aa14.27□□□□□ -0.13
TMEM249-201ENST00000561638 KRTAP10-4P60372 401 aaPredicted RBP14.25□□□□□ -0.13
TMEM249-201ENST00000561638 SERP2Q8N6R1 65 aa14.25□□□□□ -0.13
TMEM249-201ENST00000561638 HIGD2AQ9BW72 106 aa14.25□□□□□ -0.13
TMEM249-201ENST00000561638 KRTAP17-1Q9BYP8 105 aa14.25□□□□□ -0.13
TMEM249-201ENST00000561638 TRBV7-6A0A0J9YX20 115 aa14.24□□□□□ -0.13
TMEM249-201ENST00000561638 ELOF1P60002 83 aaKnown RBP14.24□□□□□ -0.13
TMEM249-201ENST00000561638 SRRM2Q9UQ35 2752 aaKnown RBP14.23□□□□□ -0.13
TMEM249-201ENST00000561638 H0Y9J4 135 aa14.23□□□□□ -0.13
TMEM249-201ENST00000561638 Q6JHZ5 121 aa14.22□□□□□ -0.13
TMEM249-201ENST00000561638 KRTAP13-1Q8IUC0 172 aa14.22□□□□□ -0.13
TMEM249-201ENST00000561638 DNAL4O96015 105 aa14.21□□□□□ -0.13
TMEM249-201ENST00000561638 BAALC-AS2P0C853 105 aa14.19□□□□□ -0.14
TMEM249-201ENST00000561638 SPINK6Q6UWN8 80 aa14.18□□□□□ -0.14
TMEM249-201ENST00000561638 Q9BRP9 147 aa14.18□□□□□ -0.14
TMEM249-201ENST00000561638 DHRS4-AS1Q9P1J3 65 aa14.17□□□□□ -0.14
TMEM249-201ENST00000561638 ATP5EP2Q5VTU8 51 aa14.17□□□□□ -0.14
TMEM249-201ENST00000561638 SMCR5Q8TEV8 140 aa14.17□□□□□ -0.14
TMEM249-201ENST00000561638 H0YGX0 51 aa14.16□□□□□ -0.14
TMEM249-201ENST00000561638 hADV29S1A0JD25 119 aa14.14□□□□□ -0.15
TMEM249-201ENST00000561638 LINC00575Q6W349 94 aa14.11□□□□□ -0.15
TMEM249-201ENST00000561638 ERC2-IT1O76042 136 aa14.11□□□□□ -0.15
TMEM249-201ENST00000561638 KRTAP4-5Q9BYR2 181 aa14.1□□□□□ -0.15
TMEM249-201ENST00000561638 HERC2O95714 4834 aa14.08□□□□□ -0.16
TMEM249-201ENST00000561638 FAM218AQ96MZ4 157 aa14.07□□□□□ -0.16
TMEM249-201ENST00000561638 ZNF706Q9Y5V0 76 aaPredicted RBP14.07□□□□□ -0.16
TMEM249-201ENST00000561638 ST20-AS1Q8NBB2 130 aa14.04□□□□□ -0.16
TMEM249-201ENST00000561638 Q6ZQY7 126 aa14.01□□□□□ -0.17
TMEM249-201ENST00000561638 SPRR4Q96PI1 79 aa14.01□□□□□ -0.17
TMEM249-201ENST00000561638 DEFB105AQ8NG35 78 aa14.01□□□□□ -0.17
TMEM249-201ENST00000561638 PRO0628Q9UI54 55 aa13.99□□□□□ -0.17
TMEM249-201ENST00000561638 OBSCN-AS1Q96MR7 158 aa13.99□□□□□ -0.17
TMEM249-201ENST00000561638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.98□□□□□ -0.17
TMEM249-201ENST00000561638 SERP1Q9Y6X1 66 aa13.98□□□□□ -0.17
TMEM249-201ENST00000561638 ANAPC11Q9NYG5 84 aa13.97□□□□□ -0.17
TMEM249-201ENST00000561638 FLG2Q5D862 2391 aaPredicted RBP13.97□□□□□ -0.17
TMEM249-201ENST00000561638 JMJD7-PLA2G4BH0Y9G9 81 aa13.96□□□□□ -0.18
TMEM249-201ENST00000561638 FAM236DA0A1B0GTK5 79 aa13.94□□□□□ -0.18
TMEM249-201ENST00000561638 KRTAP1-4P0C5Y4 121 aa13.94□□□□□ -0.18
TMEM249-201ENST00000561638 FAM236CP0DP71 79 aa13.94□□□□□ -0.18
TMEM249-201ENST00000561638 ATP5EP56381 51 aaPredicted RBP13.93□□□□□ -0.18
TMEM249-201ENST00000561638 Q5XG85 94 aa13.93□□□□□ -0.18
TMEM249-201ENST00000561638 IGLV5-48A0A075B6I7 105 aa13.91□□□□□ -0.18
TMEM249-201ENST00000561638 DSCR8Q96T75 97 aa13.91□□□□□ -0.18
TMEM249-201ENST00000561638 LINC00483Q53H64 154 aa13.91□□□□□ -0.18
TMEM249-201ENST00000561638 GHRHP01286 108 aa13.9□□□□□ -0.18
TMEM249-201ENST00000561638 HRCT1Q6UXD1 115 aa13.9□□□□□ -0.18
TMEM249-201ENST00000561638 ORMDL1Q9P0S3 153 aa13.89□□□□□ -0.19
TMEM249-201ENST00000561638 IGKV3D-7A0A0C4DH55 119 aa13.88□□□□□ -0.19
TMEM249-201ENST00000561638 CCKP06307 115 aa13.88□□□□□ -0.19
TMEM249-201ENST00000561638 LINC01547P58512 204 aaPredicted RBP13.88□□□□□ -0.19
TMEM249-201ENST00000561638 FAM229BQ4G0N7 80 aa13.88□□□□□ -0.19
TMEM249-201ENST00000561638 Q8N377 158 aa13.88□□□□□ -0.19
TMEM249-201ENST00000561638 PKHD1L1Q86WI1 4243 aa13.87□□□□□ -0.19
TMEM249-201ENST00000561638 NDUFC1O43677 76 aa13.87□□□□□ -0.19
TMEM249-201ENST00000561638 SPRR1BP22528 89 aa13.87□□□□□ -0.19
TMEM249-201ENST00000561638 C4orf26Q17RF5 130 aa13.87□□□□□ -0.19
TMEM249-201ENST00000561638 LINC00846Q9NV44 126 aa13.86□□□□□ -0.19
TMEM249-201ENST00000561638 A0A087X002 238 aa13.86□□□□□ -0.19
TMEM249-201ENST00000561638 C14orf132Q9NPU4 83 aa13.86□□□□□ -0.19
TMEM249-201ENST00000561638 LAMTOR3Q9UHA4 124 aa13.86□□□□□ -0.19
TMEM249-201ENST00000561638 ABCA13Q86UQ4 5058 aa13.85□□□□□ -0.19
TMEM249-201ENST00000561638 PRR26Q8N8Z3 221 aa13.85□□□□□ -0.19
TMEM249-201ENST00000561638 UBL5Q9BZL1 73 aa13.85□□□□□ -0.19
TMEM249-201ENST00000561638 SMIM26A0A096LP01 95 aa13.84□□□□□ -0.19
TMEM249-201ENST00000561638 IGLV9-49A0A0B4J1Y8 123 aa13.84□□□□□ -0.19
TMEM249-201ENST00000561638 TRAV7A0A075B6U4 112 aa13.82□□□□□ -0.2
TMEM249-201ENST00000561638 MYCBP2O75592 4640 aa13.81□□□□□ -0.2
TMEM249-201ENST00000561638 H3BQ85 93 aa13.81□□□□□ -0.2
TMEM249-201ENST00000561638 TMEM256-PLSCR3K7ERE1 68 aa13.8□□□□□ -0.2
TMEM249-201ENST00000561638 F8WEM9 126 aa13.79□□□□□ -0.2
TMEM249-201ENST00000561638 OXTP01178 125 aa13.79□□□□□ -0.2
TMEM249-201ENST00000561638 SMIM29Q86T20 159 aa13.78□□□□□ -0.2
TMEM249-201ENST00000561638 MOBPQ13875 183 aa13.78□□□□□ -0.2
TMEM249-201ENST00000561638 TYMSOSQ8TAI1 123 aa13.78□□□□□ -0.2
TMEM249-201ENST00000561638 CYSTM1Q9H1C7 97 aa13.78□□□□□ -0.2
TMEM249-201ENST00000561638 KRTAP13-2Q52LG2 175 aa13.77□□□□□ -0.21
TMEM249-201ENST00000561638 LRP1Q07954 4544 aaKnown RBP13.76□□□□□ -0.21
TMEM249-201ENST00000561638 A0A087WVE0 104 aa13.75□□□□□ -0.21
TMEM249-201ENST00000561638 KLKP1Q107X0 134 aa13.75□□□□□ -0.21
TMEM249-201ENST00000561638 KRTAP29-1A8MX34 341 aaPredicted RBP13.73□□□□□ -0.21
TMEM249-201ENST00000561638 C20orf197Q8N268 126 aa13.73□□□□□ -0.21
TMEM249-201ENST00000561638 Q8NBF4 154 aa13.73□□□□□ -0.21
TMEM249-201ENST00000561638 PDE6GP18545 87 aa13.71□□□□□ -0.22
TMEM249-201ENST00000561638 J3QL48 77 aa13.69□□□□□ -0.22
TMEM249-201ENST00000561638 KRTAP10-8P60410 259 aa13.68□□□□□ -0.22
TMEM249-201ENST00000561638 PCLOQ9Y6V0 5065 aa13.67□□□□□ -0.22
TMEM249-201ENST00000561638 FAT3Q8TDW7 4589 aa13.67□□□□□ -0.22
TMEM249-201ENST00000561638 SSBP3-AS1Q7Z2R9 100 aa13.67□□□□□ -0.22
TMEM249-201ENST00000561638 H7BZZ5 65 aa13.66□□□□□ -0.22
TMEM249-201ENST00000561638 MT1HL1P0DM35 61 aa13.65□□□□□ -0.22
TMEM249-201ENST00000561638 CXCL6P80162 114 aa13.62□□□□□ -0.23
TMEM249-201ENST00000561638 IGLV8-61A0A075B6I0 122 aa13.61□□□□□ -0.23
TMEM249-201ENST00000561638 LINC00304Q8N9R0 145 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms