RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 VPREB1P12018 145 aa5.23□□□□□ -1.57
PALB2-202ENST00000561514 RPL28P46779 137 aaKnown RBP5.23□□□□□ -1.57
PALB2-202ENST00000561514 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
PALB2-202ENST00000561514 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
PALB2-202ENST00000561514 NDUFA12Q9UI09 145 aa5.23□□□□□ -1.57
PALB2-202ENST00000561514 A0A096LNI7 61 aa5.22□□□□□ -1.57
PALB2-202ENST00000561514 H3BQ85 93 aa5.22□□□□□ -1.57
PALB2-202ENST00000561514 NDUFA1O15239 70 aa5.22□□□□□ -1.57
PALB2-202ENST00000561514 POLR2KP53803 58 aaKnown RBP5.22□□□□□ -1.57
PALB2-202ENST00000561514 HIGD2BQ4VC39 106 aa5.22□□□□□ -1.57
PALB2-202ENST00000561514 SPINK6Q6UWN8 80 aa5.22□□□□□ -1.57
PALB2-202ENST00000561514 CXCL6P80162 114 aa5.21□□□□□ -1.58
PALB2-202ENST00000561514 Q6ZVQ6 151 aa5.21□□□□□ -1.58
PALB2-202ENST00000561514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.2□□□□□ -1.58
PALB2-202ENST00000561514 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
PALB2-202ENST00000561514 A0A087WVE0 104 aa5.2□□□□□ -1.58
PALB2-202ENST00000561514 IGKV2-24A0A0C4DH68 120 aa5.2□□□□□ -1.58
PALB2-202ENST00000561514 IGKV2-29A2NJV5 120 aaPredicted RBP5.2□□□□□ -1.58
PALB2-202ENST00000561514 PDE6GP18545 87 aa5.2□□□□□ -1.58
PALB2-202ENST00000561514 REG3GQ6UW15 175 aa5.2□□□□□ -1.58
PALB2-202ENST00000561514 RPL39LQ96EH5 51 aaKnown RBP5.2□□□□□ -1.58
PALB2-202ENST00000561514 SS18Q15532 418 aa5.19□□□□□ -1.58
PALB2-202ENST00000561514 Q6ZRP5 223 aa5.19□□□□□ -1.58
PALB2-202ENST00000561514 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
PALB2-202ENST00000561514 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
PALB2-202ENST00000561514 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
PALB2-202ENST00000561514 IGKV3OR2-268A0A0C4DH90 116 aa5.18□□□□□ -1.58
PALB2-202ENST00000561514 LINC00959A0A1B0GUT2 108 aa5.18□□□□□ -1.58
PALB2-202ENST00000561514 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
PALB2-202ENST00000561514 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
PALB2-202ENST00000561514 LPAP08519 4548 aa5.17□□□□□ -1.58
PALB2-202ENST00000561514 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
PALB2-202ENST00000561514 CDC42SE2Q9NRR3 84 aa5.17□□□□□ -1.58
PALB2-202ENST00000561514 ORMDL1Q9P0S3 153 aa5.17□□□□□ -1.58
PALB2-202ENST00000561514 UBE2AP49459 152 aa5.16□□□□□ -1.58
PALB2-202ENST00000561514 SYCNQ0VAF6 134 aa5.16□□□□□ -1.58
PALB2-202ENST00000561514 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
PALB2-202ENST00000561514 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.59
PALB2-202ENST00000561514 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.59
PALB2-202ENST00000561514 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
PALB2-202ENST00000561514 TMEM254Q8TBM7 123 aa5.15□□□□□ -1.59
PALB2-202ENST00000561514 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 IGLV5-45A0A087WSX0 123 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 A0A1W2PNN7 141 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 PRYO14603 147 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 XP32Q5T750 250 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 LINC00167Q96N53 147 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 MUC2Q02817 5179 aa5.14□□□□□ -1.59
PALB2-202ENST00000561514 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
PALB2-202ENST00000561514 M0R378 163 aa5.13□□□□□ -1.59
PALB2-202ENST00000561514 CYP4F30PQ9H0H9 118 aa5.13□□□□□ -1.59
PALB2-202ENST00000561514 LOC110117498A0A087WWA1 95 aa5.12□□□□□ -1.59
PALB2-202ENST00000561514 C9orf116Q5BN46 136 aaPredicted RBP5.12□□□□□ -1.59
PALB2-202ENST00000561514 LCA10Q71F78 164 aa5.12□□□□□ -1.59
PALB2-202ENST00000561514 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
PALB2-202ENST00000561514 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
PALB2-202ENST00000561514 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
PALB2-202ENST00000561514 RPL39P62891 51 aaKnown RBP5.11□□□□□ -1.59
PALB2-202ENST00000561514 NREPQ16612 68 aa5.11□□□□□ -1.59
PALB2-202ENST00000561514 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
PALB2-202ENST00000561514 FAM19A3Q7Z5A8 133 aa5.11□□□□□ -1.59
PALB2-202ENST00000561514 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
PALB2-202ENST00000561514 SNURFQ9Y675 71 aa5.11□□□□□ -1.59
PALB2-202ENST00000561514 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 FAM104AQ969W3 186 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
PALB2-202ENST00000561514 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 CAMK2N2Q96S95 79 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
PALB2-202ENST00000561514 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
PALB2-202ENST00000561514 IGHV3OR16-9A0A0B4J2B5 98 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 C8orf87E5RJ46 101 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 NDUFB1O75438 58 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 IGLV7-43P04211 117 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
PALB2-202ENST00000561514 SPAG11BQ08648 103 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 DIRC1Q969H9 104 aa5.08□□□□□ -1.6
PALB2-202ENST00000561514 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 A0A087WZ39 114 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 A0A087X002 238 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 H0Y9J4 135 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 RNASE13Q5GAN3 156 aaKnown RBP5.07□□□□□ -1.6
PALB2-202ENST00000561514 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
PALB2-202ENST00000561514 KRTAP7-1Q8IUC3 87 aa5.06□□□□□ -1.6
PALB2-202ENST00000561514 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
PALB2-202ENST00000561514 TRAV22A0A0B4J277 110 aa5.05□□□□□ -1.6
PALB2-202ENST00000561514 BPY2O14599 106 aa5.05□□□□□ -1.6
PALB2-202ENST00000561514 NCR3O14931 201 aa5.05□□□□□ -1.6
PALB2-202ENST00000561514 ELOF1P60002 83 aaKnown RBP5.05□□□□□ -1.6
PALB2-202ENST00000561514 KIAA0087Q14695 138 aa5.05□□□□□ -1.6
PALB2-202ENST00000561514 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
PALB2-202ENST00000561514 FAM168BA1KXE4 195 aa5.04□□□□□ -1.6
PALB2-202ENST00000561514 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
PALB2-202ENST00000561514 SND1-IT1Q9HBX3 110 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms