RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 CD164Q04900 197 aa6.27□□□□□ -1.41
USP3-220ENST00000561381 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
USP3-220ENST00000561381 PRO1933Q9H354 126 aa6.27□□□□□ -1.41
USP3-220ENST00000561381 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
USP3-220ENST00000561381 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
USP3-220ENST00000561381 AKR1D1P51857 326 aa6.24□□□□□ -1.41
USP3-220ENST00000561381 IGLV5-48A0A075B6I7 105 aa6.23□□□□□ -1.41
USP3-220ENST00000561381 TRBV7-6A0A0J9YX20 115 aa6.23□□□□□ -1.41
USP3-220ENST00000561381 KRTDAPP60985 99 aa6.23□□□□□ -1.41
USP3-220ENST00000561381 Q5XG85 94 aa6.23□□□□□ -1.41
USP3-220ENST00000561381 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
USP3-220ENST00000561381 A0A1B0GWB2 263 aa6.22□□□□□ -1.41
USP3-220ENST00000561381 A6NDN8 102 aa6.22□□□□□ -1.41
USP3-220ENST00000561381 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
USP3-220ENST00000561381 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
USP3-220ENST00000561381 CFC1BP0CG36 223 aa6.2□□□□□ -1.42
USP3-220ENST00000561381 IFITM1P13164 125 aa6.2□□□□□ -1.42
USP3-220ENST00000561381 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
USP3-220ENST00000561381 PCP2Q8IVA1 136 aa6.2□□□□□ -1.42
USP3-220ENST00000561381 RPL37P61927 97 aaKnown RBP6.19□□□□□ -1.42
USP3-220ENST00000561381 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
USP3-220ENST00000561381 COA6Q5JTJ3 125 aaKnown RBP6.18□□□□□ -1.42
USP3-220ENST00000561381 COPS9Q8WXC6 57 aa6.18□□□□□ -1.42
USP3-220ENST00000561381 Q6ZVH6 145 aa6.17□□□□□ -1.42
USP3-220ENST00000561381 C20orf202A1L168 122 aa6.16□□□□□ -1.42
USP3-220ENST00000561381 A4D1N5 150 aa6.16□□□□□ -1.42
USP3-220ENST00000561381 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
USP3-220ENST00000561381 M0R2T5 61 aa6.15□□□□□ -1.42
USP3-220ENST00000561381 TCL1BO95988 128 aa6.14□□□□□ -1.43
USP3-220ENST00000561381 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
USP3-220ENST00000561381 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
USP3-220ENST00000561381 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
USP3-220ENST00000561381 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
USP3-220ENST00000561381 F8WEM9 126 aa6.12□□□□□ -1.43
USP3-220ENST00000561381 Q6ZQY7 126 aa6.11□□□□□ -1.43
USP3-220ENST00000561381 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
USP3-220ENST00000561381 TRBV7-7A0A0K0K1E9 115 aa6.09□□□□□ -1.43
USP3-220ENST00000561381 hADV29S1A0JD25 119 aa6.09□□□□□ -1.43
USP3-220ENST00000561381 VAMP3Q15836 100 aa6.09□□□□□ -1.43
USP3-220ENST00000561381 CLEC2BQ92478 149 aa6.08□□□□□ -1.44
USP3-220ENST00000561381 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
USP3-220ENST00000561381 OCIAD2Q56VL3 154 aa6.07□□□□□ -1.44
USP3-220ENST00000561381 Q6JHZ5 121 aa6.07□□□□□ -1.44
USP3-220ENST00000561381 SNRPEP62304 92 aaKnown RBP6.06□□□□□ -1.44
USP3-220ENST00000561381 Q6Q795 121 aa6.05□□□□□ -1.44
USP3-220ENST00000561381 C12orf57Q99622 126 aa6.05□□□□□ -1.44
USP3-220ENST00000561381 H3BUT2 72 aa6.04□□□□□ -1.44
USP3-220ENST00000561381 Q75L30 129 aa6.04□□□□□ -1.44
USP3-220ENST00000561381 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
USP3-220ENST00000561381 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.03□□□□□ -1.44
USP3-220ENST00000561381 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
USP3-220ENST00000561381 HIST3H2BBQ8N257 126 aa6.03□□□□□ -1.44
USP3-220ENST00000561381 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
USP3-220ENST00000561381 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
USP3-220ENST00000561381 SNHG12Q9BXW3 62 aa6.01□□□□□ -1.45
USP3-220ENST00000561381 LST1O00453 97 aa6□□□□□ -1.45
USP3-220ENST00000561381 S100A2P29034 98 aa6□□□□□ -1.45
USP3-220ENST00000561381 Q96NJ1 140 aa6□□□□□ -1.45
USP3-220ENST00000561381 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
USP3-220ENST00000561381 BVES-AS1Q5T3Y7 98 aa5.99□□□□□ -1.45
USP3-220ENST00000561381 PPDPFLQ8WWR9 84 aa5.99□□□□□ -1.45
USP3-220ENST00000561381 HIST1H4GQ99525 98 aa5.98□□□□□ -1.45
USP3-220ENST00000561381 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
USP3-220ENST00000561381 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
USP3-220ENST00000561381 CFC1P0CG37 223 aa5.95□□□□□ -1.46
USP3-220ENST00000561381 COX8AP10176 69 aa5.95□□□□□ -1.46
USP3-220ENST00000561381 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
USP3-220ENST00000561381 A8MUU9 505 aa5.94□□□□□ -1.46
USP3-220ENST00000561381 A0A087WSZ3 146 aa5.93□□□□□ -1.46
USP3-220ENST00000561381 NDUFV3P56181 108 aaKnown RBP5.93□□□□□ -1.46
USP3-220ENST00000561381 TEN1Q86WV5 123 aa5.93□□□□□ -1.46
USP3-220ENST00000561381 SS18L2Q9UHA2 77 aa5.93□□□□□ -1.46
USP3-220ENST00000561381 DSCR10P59022 87 aa5.91□□□□□ -1.46
USP3-220ENST00000561381 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
USP3-220ENST00000561381 C14orf144Q96I85 54 aa5.91□□□□□ -1.46
USP3-220ENST00000561381 DLEU1O43261 78 aa5.9□□□□□ -1.46
USP3-220ENST00000561381 S100A6P06703 90 aa5.9□□□□□ -1.46
USP3-220ENST00000561381 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
USP3-220ENST00000561381 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
USP3-220ENST00000561381 H0YGX0 51 aa5.89□□□□□ -1.47
USP3-220ENST00000561381 H3BMG7 143 aa5.89□□□□□ -1.47
USP3-220ENST00000561381 USH2AO75445 5202 aa5.88□□□□□ -1.47
USP3-220ENST00000561381 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
USP3-220ENST00000561381 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
USP3-220ENST00000561381 SNCGO76070 127 aa5.88□□□□□ -1.47
USP3-220ENST00000561381 FABP2P12104 132 aa5.88□□□□□ -1.47
USP3-220ENST00000561381 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
USP3-220ENST00000561381 C2orf91Q6ZV80 131 aa5.87□□□□□ -1.47
USP3-220ENST00000561381 SIGMAR1Q99720 223 aa5.86□□□□□ -1.47
USP3-220ENST00000561381 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
USP3-220ENST00000561381 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
USP3-220ENST00000561381 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
USP3-220ENST00000561381 A0A1B0GV72 72 aa5.84□□□□□ -1.47
USP3-220ENST00000561381 SPATA45Q537H7 98 aa5.84□□□□□ -1.47
USP3-220ENST00000561381 A0A1B0GX51 115 aa5.83□□□□□ -1.48
USP3-220ENST00000561381 TRIAP1O43715 76 aa5.83□□□□□ -1.48
USP3-220ENST00000561381 MT2AP02795 61 aa5.83□□□□□ -1.48
USP3-220ENST00000561381 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
USP3-220ENST00000561381 LINC00313P59037 77 aa5.83□□□□□ -1.48
USP3-220ENST00000561381 CEND1Q8N111 149 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms