RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IFITM1P13164 125 aa9.32□□□□□ -0.92
TPM1-226ENST00000560959 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
TPM1-226ENST00000560959 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
TPM1-226ENST00000560959 IGFL1Q6UW32 110 aa9.31□□□□□ -0.92
TPM1-226ENST00000560959 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
TPM1-226ENST00000560959 LST1O00453 97 aa9.29□□□□□ -0.92
TPM1-226ENST00000560959 Q6ZVH6 145 aa9.29□□□□□ -0.92
TPM1-226ENST00000560959 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
TPM1-226ENST00000560959 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
TPM1-226ENST00000560959 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
TPM1-226ENST00000560959 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
TPM1-226ENST00000560959 VAMP3Q15836 100 aa9.25□□□□□ -0.93
TPM1-226ENST00000560959 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
TPM1-226ENST00000560959 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
TPM1-226ENST00000560959 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
TPM1-226ENST00000560959 SLC7A5P1Q8MH63 180 aa9.24□□□□□ -0.93
TPM1-226ENST00000560959 PET117Q6UWS5 81 aa9.23□□□□□ -0.93
TPM1-226ENST00000560959 FAM236DA0A1B0GTK5 79 aa9.22□□□□□ -0.93
TPM1-226ENST00000560959 FAM236CP0DP71 79 aa9.22□□□□□ -0.93
TPM1-226ENST00000560959 Q6ZQY7 126 aa9.22□□□□□ -0.93
TPM1-226ENST00000560959 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
TPM1-226ENST00000560959 hADV29S1A0JD25 119 aa9.21□□□□□ -0.94
TPM1-226ENST00000560959 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
TPM1-226ENST00000560959 SS18L2Q9UHA2 77 aa9.2□□□□□ -0.94
TPM1-226ENST00000560959 PPDPFLQ8WWR9 84 aa9.19□□□□□ -0.94
TPM1-226ENST00000560959 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
TPM1-226ENST00000560959 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
TPM1-226ENST00000560959 KRTAP6-3Q3LI67 103 aa9.16□□□□□ -0.94
TPM1-226ENST00000560959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
TPM1-226ENST00000560959 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
TPM1-226ENST00000560959 SNHG12Q9BXW3 62 aa9.13□□□□□ -0.95
TPM1-226ENST00000560959 HRES1P13985 223 aa9.12□□□□□ -0.95
TPM1-226ENST00000560959 COLCA2A8K830 154 aa9.11□□□□□ -0.95
TPM1-226ENST00000560959 C3orf79P0CE67 100 aa9.1□□□□□ -0.95
TPM1-226ENST00000560959 H3BUT2 72 aa9.09□□□□□ -0.95
TPM1-226ENST00000560959 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
TPM1-226ENST00000560959 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
TPM1-226ENST00000560959 DSCR10P59022 87 aa9.07□□□□□ -0.96
TPM1-226ENST00000560959 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BKO60814 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BJP06899 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BOP23527 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BBP33778 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BDP58876 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 LINC00313P59037 77 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BCP62807 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST2H2BEQ16778 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
TPM1-226ENST00000560959 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
TPM1-226ENST00000560959 A0A087WSZ3 146 aa9.02□□□□□ -0.97
TPM1-226ENST00000560959 MTURNQ8N3F0 131 aa9.02□□□□□ -0.97
TPM1-226ENST00000560959 KRTDAPP60985 99 aa9.01□□□□□ -0.97
TPM1-226ENST00000560959 C12orf57Q99622 126 aa8.98□□□□□ -0.97
TPM1-226ENST00000560959 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.98
TPM1-226ENST00000560959 A8MWP4 228 aa8.95□□□□□ -0.98
TPM1-226ENST00000560959 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
TPM1-226ENST00000560959 SIGMAR1Q99720 223 aa8.95□□□□□ -0.98
TPM1-226ENST00000560959 NEBP20929 6669 aa8.95□□□□□ -0.98
TPM1-226ENST00000560959 ATOH7Q8N100 152 aa8.94□□□□□ -0.98
TPM1-226ENST00000560959 SNCGO76070 127 aa8.92□□□□□ -0.98
TPM1-226ENST00000560959 COA6Q5JTJ3 125 aaKnown RBP8.92□□□□□ -0.98
TPM1-226ENST00000560959 H3BMG7 143 aa8.89□□□□□ -0.99
TPM1-226ENST00000560959 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
TPM1-226ENST00000560959 GHRHP01286 108 aa8.87□□□□□ -0.99
TPM1-226ENST00000560959 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
TPM1-226ENST00000560959 H0YGX0 51 aa8.85□□□□□ -0.99
TPM1-226ENST00000560959 Q8N9P0 234 aaPredicted RBP8.83□□□□□ -1
TPM1-226ENST00000560959 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
TPM1-226ENST00000560959 SPINK7P58062 85 aa8.82□□□□□ -1
TPM1-226ENST00000560959 MUC12Q9UKN1 5478 aa8.82□□□□□ -1
TPM1-226ENST00000560959 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
TPM1-226ENST00000560959 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
TPM1-226ENST00000560959 FAM218AQ96MZ4 157 aa8.79□□□□□ -1
TPM1-226ENST00000560959 A0A1B0GX51 115 aa8.78□□□□□ -1
TPM1-226ENST00000560959 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
TPM1-226ENST00000560959 FABP2P12104 132 aa8.77□□□□□ -1.01
TPM1-226ENST00000560959 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
TPM1-226ENST00000560959 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
TPM1-226ENST00000560959 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
TPM1-226ENST00000560959 RAB37Q96AX2 223 aa8.76□□□□□ -1.01
TPM1-226ENST00000560959 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
TPM1-226ENST00000560959 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
TPM1-226ENST00000560959 KRTAP20-1Q3LI63 56 aa8.71□□□□□ -1.02
TPM1-226ENST00000560959 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
TPM1-226ENST00000560959 A0A0B4J2C4 111 aa8.67□□□□□ -1.02
TPM1-226ENST00000560959 WFDC13Q8IUB5 93 aa8.67□□□□□ -1.02
TPM1-226ENST00000560959 H3BQ85 93 aa8.66□□□□□ -1.02
TPM1-226ENST00000560959 TRACP01848 142 aa8.65□□□□□ -1.02
TPM1-226ENST00000560959 CCKP06307 115 aa8.64□□□□□ -1.03
TPM1-226ENST00000560959 DLEU1O43261 78 aa8.62□□□□□ -1.03
TPM1-226ENST00000560959 COX8AP10176 69 aa8.61□□□□□ -1.03
TPM1-226ENST00000560959 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
TPM1-226ENST00000560959 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
TPM1-226ENST00000560959 A6NN06 94 aa8.58□□□□□ -1.04
TPM1-226ENST00000560959 J3KT08 172 aa8.58□□□□□ -1.04
TPM1-226ENST00000560959 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
TPM1-226ENST00000560959 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms