RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PDE6GP18545 87 aa5.23□□□□□ -1.57
TRAF3-209ENST00000560463 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
TRAF3-209ENST00000560463 RBM3P98179 157 aaKnown RBP5.23□□□□□ -1.57
TRAF3-209ENST00000560463 K7ERU9 68 aa5.22□□□□□ -1.57
TRAF3-209ENST00000560463 SPRR4Q96PI1 79 aa5.22□□□□□ -1.57
TRAF3-209ENST00000560463 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
TRAF3-209ENST00000560463 F8WEM9 126 aa5.21□□□□□ -1.58
TRAF3-209ENST00000560463 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
TRAF3-209ENST00000560463 GAGE2AQ6NT46 116 aa5.21□□□□□ -1.58
TRAF3-209ENST00000560463 DSCR8Q96T75 97 aa5.21□□□□□ -1.58
TRAF3-209ENST00000560463 HSPG2P98160 4391 aa5.2□□□□□ -1.58
TRAF3-209ENST00000560463 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
TRAF3-209ENST00000560463 SMR3BP02814 79 aaPredicted RBP5.2□□□□□ -1.58
TRAF3-209ENST00000560463 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
TRAF3-209ENST00000560463 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
TRAF3-209ENST00000560463 IGLV8-61A0A075B6I0 122 aa5.19□□□□□ -1.58
TRAF3-209ENST00000560463 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
TRAF3-209ENST00000560463 FAM229AH3BQW9 127 aa5.19□□□□□ -1.58
TRAF3-209ENST00000560463 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
TRAF3-209ENST00000560463 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
TRAF3-209ENST00000560463 C14orf132Q9NPU4 83 aa5.19□□□□□ -1.58
TRAF3-209ENST00000560463 FAT1Q14517 4588 aa5.18□□□□□ -1.58
TRAF3-209ENST00000560463 FAM240AA0A1B0GVK7 77 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 CCKP06307 115 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 ACYP1P07311 99 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
TRAF3-209ENST00000560463 FAM229BQ4G0N7 80 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 Q6JHZ5 121 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 Q6ZQT0 140 aa5.17□□□□□ -1.58
TRAF3-209ENST00000560463 A0A1B0GV72 72 aa5.16□□□□□ -1.58
TRAF3-209ENST00000560463 A0A1B0GW54 56 aa5.16□□□□□ -1.58
TRAF3-209ENST00000560463 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
TRAF3-209ENST00000560463 Q8NBF4 154 aa5.14□□□□□ -1.59
TRAF3-209ENST00000560463 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
TRAF3-209ENST00000560463 C9orf153Q5TBE3 101 aa5.13□□□□□ -1.59
TRAF3-209ENST00000560463 IGFL1Q6UW32 110 aa5.13□□□□□ -1.59
TRAF3-209ENST00000560463 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
TRAF3-209ENST00000560463 RYR1P21817 5038 aa5.13□□□□□ -1.59
TRAF3-209ENST00000560463 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
TRAF3-209ENST00000560463 CRYGAP11844 174 aa5.12□□□□□ -1.59
TRAF3-209ENST00000560463 Q5VSD8 79 aa5.12□□□□□ -1.59
TRAF3-209ENST00000560463 Q6Q795 121 aa5.12□□□□□ -1.59
TRAF3-209ENST00000560463 VPS25Q9BRG1 176 aa5.12□□□□□ -1.59
TRAF3-209ENST00000560463 A0A1W2PNM2 257 aa5.11□□□□□ -1.59
TRAF3-209ENST00000560463 Q8N1X5 172 aa5.11□□□□□ -1.59
TRAF3-209ENST00000560463 ANAPC11Q9NYG5 84 aa5.11□□□□□ -1.59
TRAF3-209ENST00000560463 MOBPQ13875 183 aa5.1□□□□□ -1.59
TRAF3-209ENST00000560463 A0A087X002 238 aa5.09□□□□□ -1.59
TRAF3-209ENST00000560463 CD164Q04900 197 aa5.08□□□□□ -1.6
TRAF3-209ENST00000560463 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
TRAF3-209ENST00000560463 UBL5Q9BZL1 73 aa5.08□□□□□ -1.6
TRAF3-209ENST00000560463 KIAA1109Q2LD37 5005 aa5.08□□□□□ -1.6
TRAF3-209ENST00000560463 TRBV7-7A0A0K0K1E9 115 aa5.07□□□□□ -1.6
TRAF3-209ENST00000560463 LINC00846Q9NV44 126 aa5.07□□□□□ -1.6
TRAF3-209ENST00000560463 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
TRAF3-209ENST00000560463 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
TRAF3-209ENST00000560463 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
TRAF3-209ENST00000560463 NREPQ16612 68 aa5.05□□□□□ -1.6
TRAF3-209ENST00000560463 LINC00643Q86TS7 51 aa5.05□□□□□ -1.6
TRAF3-209ENST00000560463 SS18L2Q9UHA2 77 aa5.05□□□□□ -1.6
TRAF3-209ENST00000560463 A0A087WSZ3 146 aa5.04□□□□□ -1.6
TRAF3-209ENST00000560463 Q6ZVQ6 151 aa5.04□□□□□ -1.6
TRAF3-209ENST00000560463 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
TRAF3-209ENST00000560463 ATP5EP2Q5VTU8 51 aa5.03□□□□□ -1.6
TRAF3-209ENST00000560463 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
TRAF3-209ENST00000560463 TNXBP22105 4242 aa5.02□□□□□ -1.61
TRAF3-209ENST00000560463 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
TRAF3-209ENST00000560463 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
TRAF3-209ENST00000560463 SPINK1P00995 79 aa5.01□□□□□ -1.61
TRAF3-209ENST00000560463 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
TRAF3-209ENST00000560463 Q5XG85 94 aa5.01□□□□□ -1.61
TRAF3-209ENST00000560463 HRCT1Q6UXD1 115 aa5.01□□□□□ -1.61
TRAF3-209ENST00000560463 FLG2Q5D862 2391 aaPredicted RBP5□□□□□ -1.61
TRAF3-209ENST00000560463 CXCL6P80162 114 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 ASB16-AS1Q495Z4 193 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 LCE2CQ5TA81 110 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 LINC00304Q8N9R0 145 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 SIGMAR1Q99720 223 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 LIMD2Q9BT23 127 aa5□□□□□ -1.61
TRAF3-209ENST00000560463 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
TRAF3-209ENST00000560463 J3KT08 172 aa4.98□□□□□ -1.61
TRAF3-209ENST00000560463 BPY2O14599 106 aa4.98□□□□□ -1.61
TRAF3-209ENST00000560463 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
TRAF3-209ENST00000560463 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
TRAF3-209ENST00000560463 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
TRAF3-209ENST00000560463 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
TRAF3-209ENST00000560463 OXTP01178 125 aa4.97□□□□□ -1.61
TRAF3-209ENST00000560463 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
TRAF3-209ENST00000560463 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
TRAF3-209ENST00000560463 IGKV3D-7A0A0C4DH55 119 aa4.96□□□□□ -1.62
TRAF3-209ENST00000560463 Q96NJ1 140 aa4.96□□□□□ -1.62
TRAF3-209ENST00000560463 NDUFB1O75438 58 aa4.93□□□□□ -1.62
TRAF3-209ENST00000560463 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
TRAF3-209ENST00000560463 DSCR10P59022 87 aa4.93□□□□□ -1.62
TRAF3-209ENST00000560463 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
TRAF3-209ENST00000560463 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
TRAF3-209ENST00000560463 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
TRAF3-209ENST00000560463 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
TRAF3-209ENST00000560463 C1orf195Q5TG92 126 aa4.92□□□□□ -1.62
TRAF3-209ENST00000560463 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms