RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 KRTAP6-3Q3LI67 103 aa8.27□□□□□ -1.09
HERC1-207ENST00000560316 IGFL1Q6UW32 110 aa8.27□□□□□ -1.09
HERC1-207ENST00000560316 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
HERC1-207ENST00000560316 APOC3P02656 99 aa8.26□□□□□ -1.09
HERC1-207ENST00000560316 A8MUU9 505 aa8.25□□□□□ -1.09
HERC1-207ENST00000560316 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
HERC1-207ENST00000560316 A6NDN8 102 aa8.24□□□□□ -1.09
HERC1-207ENST00000560316 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
HERC1-207ENST00000560316 CLEC2BQ92478 149 aa8.24□□□□□ -1.09
HERC1-207ENST00000560316 A4D1N5 150 aa8.23□□□□□ -1.09
HERC1-207ENST00000560316 A6NJY4 79 aa8.23□□□□□ -1.09
HERC1-207ENST00000560316 Q6JHZ5 121 aa8.23□□□□□ -1.09
HERC1-207ENST00000560316 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
HERC1-207ENST00000560316 SNAPINO95295 136 aa8.22□□□□□ -1.09
HERC1-207ENST00000560316 KRTAP4-7Q9BYR0 210 aa8.22□□□□□ -1.09
HERC1-207ENST00000560316 LST1O00453 97 aa8.21□□□□□ -1.1
HERC1-207ENST00000560316 TRGC2P03986 189 aa8.21□□□□□ -1.1
HERC1-207ENST00000560316 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
HERC1-207ENST00000560316 LCE1DQ5T752 114 aa8.19□□□□□ -1.1
HERC1-207ENST00000560316 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
HERC1-207ENST00000560316 SVBPQ8N300 66 aa8.19□□□□□ -1.1
HERC1-207ENST00000560316 SMIM11BQ8TCY0 68 aa8.18□□□□□ -1.1
HERC1-207ENST00000560316 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
HERC1-207ENST00000560316 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
HERC1-207ENST00000560316 Q6ZQY7 126 aa8.15□□□□□ -1.1
HERC1-207ENST00000560316 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
HERC1-207ENST00000560316 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
HERC1-207ENST00000560316 HRES1P13985 223 aa8.14□□□□□ -1.11
HERC1-207ENST00000560316 NDUFA5Q16718 116 aa8.14□□□□□ -1.11
HERC1-207ENST00000560316 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
HERC1-207ENST00000560316 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
HERC1-207ENST00000560316 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
HERC1-207ENST00000560316 DSCR10P59022 87 aa8.12□□□□□ -1.11
HERC1-207ENST00000560316 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
HERC1-207ENST00000560316 IFITM1P13164 125 aa8.11□□□□□ -1.11
HERC1-207ENST00000560316 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
HERC1-207ENST00000560316 H3BUT2 72 aa8.1□□□□□ -1.11
HERC1-207ENST00000560316 hADV29S1A0JD25 119 aa8.09□□□□□ -1.11
HERC1-207ENST00000560316 LINC01545Q5VT33 79 aa8.09□□□□□ -1.11
HERC1-207ENST00000560316 NEBP20929 6669 aa8.09□□□□□ -1.11
HERC1-207ENST00000560316 VAMP3Q15836 100 aa8.08□□□□□ -1.12
HERC1-207ENST00000560316 SS18L2Q9UHA2 77 aa8.07□□□□□ -1.12
HERC1-207ENST00000560316 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
HERC1-207ENST00000560316 Q6ZVH6 145 aa8.04□□□□□ -1.12
HERC1-207ENST00000560316 SNHG12Q9BXW3 62 aa8.03□□□□□ -1.12
HERC1-207ENST00000560316 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
HERC1-207ENST00000560316 PET117Q6UWS5 81 aa8.02□□□□□ -1.13
HERC1-207ENST00000560316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.01□□□□□ -1.13
HERC1-207ENST00000560316 A0A087WSZ3 146 aa7.99□□□□□ -1.13
HERC1-207ENST00000560316 SCGB1D1O95968 90 aa7.99□□□□□ -1.13
HERC1-207ENST00000560316 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
HERC1-207ENST00000560316 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
HERC1-207ENST00000560316 LINC00313P59037 77 aa7.98□□□□□ -1.13
HERC1-207ENST00000560316 PPDPFLQ8WWR9 84 aa7.98□□□□□ -1.13
HERC1-207ENST00000560316 SIGMAR1Q99720 223 aa7.98□□□□□ -1.13
HERC1-207ENST00000560316 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
HERC1-207ENST00000560316 MUC12Q9UKN1 5478 aa7.97□□□□□ -1.13
HERC1-207ENST00000560316 COLCA2A8K830 154 aa7.96□□□□□ -1.14
HERC1-207ENST00000560316 C3orf79P0CE67 100 aa7.96□□□□□ -1.14
HERC1-207ENST00000560316 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
HERC1-207ENST00000560316 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
HERC1-207ENST00000560316 A8MWP4 228 aa7.94□□□□□ -1.14
HERC1-207ENST00000560316 ATOH7Q8N100 152 aa7.91□□□□□ -1.14
HERC1-207ENST00000560316 KRTDAPP60985 99 aa7.9□□□□□ -1.14
HERC1-207ENST00000560316 HIST1H2BKO60814 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 IGKV4-1P06312 121 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BJP06899 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BOP23527 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BBP33778 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BDP58876 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BCP62807 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST2H2BEQ16778 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BHQ93079 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BNQ99877 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 HIST1H2BMQ99879 126 aa7.88□□□□□ -1.15
HERC1-207ENST00000560316 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
HERC1-207ENST00000560316 BVES-AS1Q5T3Y7 98 aa7.87□□□□□ -1.15
HERC1-207ENST00000560316 KRTAP4-2Q9BYR5 136 aa7.87□□□□□ -1.15
HERC1-207ENST00000560316 C12orf57Q99622 126 aa7.85□□□□□ -1.15
HERC1-207ENST00000560316 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
HERC1-207ENST00000560316 H3BMG7 143 aa7.82□□□□□ -1.16
HERC1-207ENST00000560316 SPINK7P58062 85 aa7.82□□□□□ -1.16
HERC1-207ENST00000560316 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
HERC1-207ENST00000560316 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
HERC1-207ENST00000560316 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
HERC1-207ENST00000560316 FAM218AQ96MZ4 157 aa7.77□□□□□ -1.17
HERC1-207ENST00000560316 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
HERC1-207ENST00000560316 FABP2P12104 132 aa7.74□□□□□ -1.17
HERC1-207ENST00000560316 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
HERC1-207ENST00000560316 SNCGO76070 127 aa7.73□□□□□ -1.17
HERC1-207ENST00000560316 A6NN06 94 aa7.72□□□□□ -1.17
HERC1-207ENST00000560316 GHRHP01286 108 aa7.72□□□□□ -1.17
HERC1-207ENST00000560316 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
HERC1-207ENST00000560316 TRBV7-4A0A0J9YYF1 115 aa7.7□□□□□ -1.18
HERC1-207ENST00000560316 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
HERC1-207ENST00000560316 A0A1B0GV72 72 aa7.69□□□□□ -1.18
HERC1-207ENST00000560316 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
HERC1-207ENST00000560316 MDN1Q9NU22 5596 aa7.69□□□□□ -1.18
HERC1-207ENST00000560316 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms