RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
ETFA-213ENST00000560309 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
ETFA-213ENST00000560309 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
ETFA-213ENST00000560309 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
ETFA-213ENST00000560309 RPL37P61927 97 aaKnown RBP11.09□□□□□ -0.63
ETFA-213ENST00000560309 PYY3Q5JQD4 70 aa11.09□□□□□ -0.63
ETFA-213ENST00000560309 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
ETFA-213ENST00000560309 Q6ZQY7 126 aa11.09□□□□□ -0.63
ETFA-213ENST00000560309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.08□□□□□ -0.64
ETFA-213ENST00000560309 CFC1BP0CG36 223 aa11.07□□□□□ -0.64
ETFA-213ENST00000560309 KRTAP19-2Q3LHN2 52 aa11.07□□□□□ -0.64
ETFA-213ENST00000560309 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
ETFA-213ENST00000560309 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
ETFA-213ENST00000560309 DLEU1O43261 78 aa11.06□□□□□ -0.64
ETFA-213ENST00000560309 COX8AP10176 69 aa11.05□□□□□ -0.64
ETFA-213ENST00000560309 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
ETFA-213ENST00000560309 TRBV7-7A0A0K0K1E9 115 aa11.04□□□□□ -0.64
ETFA-213ENST00000560309 HIST1H4GQ99525 98 aa11.04□□□□□ -0.64
ETFA-213ENST00000560309 SNCGO76070 127 aa11.02□□□□□ -0.65
ETFA-213ENST00000560309 MT1HP80294 61 aa11.02□□□□□ -0.65
ETFA-213ENST00000560309 SPATA45Q537H7 98 aa11.02□□□□□ -0.65
ETFA-213ENST00000560309 IGFL1Q6UW32 110 aa11.02□□□□□ -0.65
ETFA-213ENST00000560309 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.65
ETFA-213ENST00000560309 PAM16Q9Y3D7 125 aa11.01□□□□□ -0.65
ETFA-213ENST00000560309 HIGD1BQ9P298 99 aa10.96□□□□□ -0.65
ETFA-213ENST00000560309 C14orf144Q96I85 54 aa10.95□□□□□ -0.66
ETFA-213ENST00000560309 C12orf57Q99622 126 aa10.95□□□□□ -0.66
ETFA-213ENST00000560309 H0YGX0 51 aa10.94□□□□□ -0.66
ETFA-213ENST00000560309 GHRHP01286 108 aa10.94□□□□□ -0.66
ETFA-213ENST00000560309 LST1O00453 97 aa10.93□□□□□ -0.66
ETFA-213ENST00000560309 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
ETFA-213ENST00000560309 SMIM6P0DI80 62 aa10.92□□□□□ -0.66
ETFA-213ENST00000560309 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
ETFA-213ENST00000560309 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
ETFA-213ENST00000560309 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
ETFA-213ENST00000560309 Q6Q795 121 aa10.91□□□□□ -0.66
ETFA-213ENST00000560309 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
ETFA-213ENST00000560309 CFC1P0CG37 223 aa10.9□□□□□ -0.66
ETFA-213ENST00000560309 Q75L30 129 aa10.9□□□□□ -0.66
ETFA-213ENST00000560309 A0A0B4J2C4 111 aa10.88□□□□□ -0.67
ETFA-213ENST00000560309 C2orf91Q6ZV80 131 aa10.88□□□□□ -0.67
ETFA-213ENST00000560309 M0R2T5 61 aa10.87□□□□□ -0.67
ETFA-213ENST00000560309 OBSCN-AS1Q96MR7 158 aa10.87□□□□□ -0.67
ETFA-213ENST00000560309 A0A1B0GX51 115 aa10.86□□□□□ -0.67
ETFA-213ENST00000560309 H3BUT2 72 aa10.86□□□□□ -0.67
ETFA-213ENST00000560309 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
ETFA-213ENST00000560309 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
ETFA-213ENST00000560309 UQCR10Q9UDW1 63 aa10.85□□□□□ -0.67
ETFA-213ENST00000560309 NDUFV3P56181 108 aaKnown RBP10.84□□□□□ -0.67
ETFA-213ENST00000560309 KRTAP10-6P60371 365 aaPredicted RBP10.84□□□□□ -0.67
ETFA-213ENST00000560309 CRCT1Q9UGL9 99 aa10.84□□□□□ -0.67
ETFA-213ENST00000560309 FSIP2Q5CZC0 6907 aa10.81□□□□□ -0.68
ETFA-213ENST00000560309 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
ETFA-213ENST00000560309 A6NJY4 79 aa10.81□□□□□ -0.68
ETFA-213ENST00000560309 Q96NJ1 140 aa10.79□□□□□ -0.68
ETFA-213ENST00000560309 PRO1854Q9UHT4 67 aa10.79□□□□□ -0.68
ETFA-213ENST00000560309 H3BMG7 143 aa10.77□□□□□ -0.69
ETFA-213ENST00000560309 CEND1Q8N111 149 aa10.77□□□□□ -0.69
ETFA-213ENST00000560309 FAM218AQ96MZ4 157 aa10.77□□□□□ -0.69
ETFA-213ENST00000560309 HSD52Q0P140 79 aa10.76□□□□□ -0.69
ETFA-213ENST00000560309 H3BQ85 93 aa10.75□□□□□ -0.69
ETFA-213ENST00000560309 A0A087WSZ3 146 aa10.74□□□□□ -0.69
ETFA-213ENST00000560309 FABP2P12104 132 aa10.74□□□□□ -0.69
ETFA-213ENST00000560309 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
ETFA-213ENST00000560309 FLGP20930 4061 aaPredicted RBP10.72□□□□□ -0.69
ETFA-213ENST00000560309 A8MUU9 505 aa10.71□□□□□ -0.69
ETFA-213ENST00000560309 FXYD2P54710 66 aa10.69□□□□□ -0.7
ETFA-213ENST00000560309 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
ETFA-213ENST00000560309 DNAL4O96015 105 aa10.67□□□□□ -0.7
ETFA-213ENST00000560309 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
ETFA-213ENST00000560309 TRIAP1O43715 76 aa10.65□□□□□ -0.7
ETFA-213ENST00000560309 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.7
ETFA-213ENST00000560309 ORMDL1Q9P0S3 153 aa10.65□□□□□ -0.7
ETFA-213ENST00000560309 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
ETFA-213ENST00000560309 A0A1W2PNM2 257 aa10.64□□□□□ -0.71
ETFA-213ENST00000560309 COX6CP09669 75 aa10.64□□□□□ -0.71
ETFA-213ENST00000560309 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
ETFA-213ENST00000560309 LINC00313P59037 77 aa10.61□□□□□ -0.71
ETFA-213ENST00000560309 M0R143 59 aa10.6□□□□□ -0.71
ETFA-213ENST00000560309 PSMB2P49721 201 aa10.6□□□□□ -0.71
ETFA-213ENST00000560309 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
ETFA-213ENST00000560309 DSCR10P59022 87 aa10.59□□□□□ -0.71
ETFA-213ENST00000560309 IGKV4-1P06312 121 aa10.57□□□□□ -0.72
ETFA-213ENST00000560309 UBE2V1Q13404 147 aa10.54□□□□□ -0.72
ETFA-213ENST00000560309 TRACP01848 142 aa10.52□□□□□ -0.73
ETFA-213ENST00000560309 LINC00472Q9H8W2 130 aa10.52□□□□□ -0.73
ETFA-213ENST00000560309 K7ERJ3 54 aa10.51□□□□□ -0.73
ETFA-213ENST00000560309 CCKP06307 115 aa10.51□□□□□ -0.73
ETFA-213ENST00000560309 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
ETFA-213ENST00000560309 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
ETFA-213ENST00000560309 A0A1B0GV72 72 aa10.45□□□□□ -0.74
ETFA-213ENST00000560309 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
ETFA-213ENST00000560309 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
ETFA-213ENST00000560309 RBM12B-AS1Q9P1G2 102 aa10.44□□□□□ -0.74
ETFA-213ENST00000560309 C8orf87E5RJ46 101 aa10.43□□□□□ -0.74
ETFA-213ENST00000560309 DSCR8Q96T75 97 aa10.43□□□□□ -0.74
ETFA-213ENST00000560309 IGHV6-1A0A0B4J1U7 121 aa10.42□□□□□ -0.74
ETFA-213ENST00000560309 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
ETFA-213ENST00000560309 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
ETFA-213ENST00000560309 DEFB116Q30KQ4 102 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms