RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 A0A087WTM6 91 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 J3KT08 172 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 UBE2AP49459 152 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 C20orf197Q8N268 126 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 SPACA4Q8TDM5 124 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
SMAD3-212ENST00000559937 NDUFC1O43677 76 aa5.02□□□□□ -1.61
SMAD3-212ENST00000559937 Q6ZR54 194 aa5.02□□□□□ -1.61
SMAD3-212ENST00000559937 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
SMAD3-212ENST00000559937 KRTAP11-1Q8IUC1 163 aa5.02□□□□□ -1.61
SMAD3-212ENST00000559937 Q8N9L7 120 aa5.01□□□□□ -1.61
SMAD3-212ENST00000559937 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
SMAD3-212ENST00000559937 DSCR10P59022 87 aa5□□□□□ -1.61
SMAD3-212ENST00000559937 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
SMAD3-212ENST00000559937 H7BZZ5 65 aa4.99□□□□□ -1.61
SMAD3-212ENST00000559937 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
SMAD3-212ENST00000559937 RPL37AP61513 92 aaKnown RBP4.99□□□□□ -1.61
SMAD3-212ENST00000559937 DPH3Q96FX2 82 aa4.99□□□□□ -1.61
SMAD3-212ENST00000559937 FAM236DA0A1B0GTK5 79 aa4.98□□□□□ -1.61
SMAD3-212ENST00000559937 PANO1I0J062 215 aa4.98□□□□□ -1.61
SMAD3-212ENST00000559937 RTL8CO15255 209 aa4.98□□□□□ -1.61
SMAD3-212ENST00000559937 FAM236CP0DP71 79 aa4.98□□□□□ -1.61
SMAD3-212ENST00000559937 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
SMAD3-212ENST00000559937 ZNF706Q9Y5V0 76 aaPredicted RBP4.98□□□□□ -1.61
SMAD3-212ENST00000559937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
SMAD3-212ENST00000559937 RYR2Q92736 4967 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 CSMD3Q7Z407 3707 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 A0A087WSZ3 146 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 LCE6AA0A183 80 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
SMAD3-212ENST00000559937 PLECQ15149 4684 aaKnown RBP4.96□□□□□ -1.62
SMAD3-212ENST00000559937 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
SMAD3-212ENST00000559937 HCG22E2RYF7 251 aa4.96□□□□□ -1.62
SMAD3-212ENST00000559937 K7EQZ3 153 aa4.96□□□□□ -1.62
SMAD3-212ENST00000559937 LINC00483Q53H64 154 aa4.96□□□□□ -1.62
SMAD3-212ENST00000559937 C1orf134Q5TEV5 83 aa4.95□□□□□ -1.62
SMAD3-212ENST00000559937 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
SMAD3-212ENST00000559937 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
SMAD3-212ENST00000559937 IGLV5-52A0A0A0MRZ9 124 aa4.94□□□□□ -1.62
SMAD3-212ENST00000559937 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
SMAD3-212ENST00000559937 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
SMAD3-212ENST00000559937 A8MWP4 228 aa4.92□□□□□ -1.62
SMAD3-212ENST00000559937 C5orf47Q569G3 176 aa4.92□□□□□ -1.62
SMAD3-212ENST00000559937 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
SMAD3-212ENST00000559937 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
SMAD3-212ENST00000559937 ZNF861PO60384 105 aa4.91□□□□□ -1.62
SMAD3-212ENST00000559937 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
SMAD3-212ENST00000559937 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
SMAD3-212ENST00000559937 LYSTQ99698 3801 aa4.91□□□□□ -1.62
SMAD3-212ENST00000559937 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
SMAD3-212ENST00000559937 H3BPC8 53 aa4.89□□□□□ -1.63
SMAD3-212ENST00000559937 OXTP01178 125 aa4.89□□□□□ -1.63
SMAD3-212ENST00000559937 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
SMAD3-212ENST00000559937 ALMS1Q8TCU4 4167 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 NDUFB1O75438 58 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 LY6G6CO95867 125 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 DEFB116Q30KQ4 102 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
SMAD3-212ENST00000559937 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
SMAD3-212ENST00000559937 HYDINQ4G0P3 5121 aa4.87□□□□□ -1.63
SMAD3-212ENST00000559937 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
SMAD3-212ENST00000559937 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
SMAD3-212ENST00000559937 VPS13DQ5THJ4 4388 aa4.86□□□□□ -1.63
SMAD3-212ENST00000559937 IGLV7-43P04211 117 aa4.86□□□□□ -1.63
SMAD3-212ENST00000559937 MOBPQ13875 183 aa4.86□□□□□ -1.63
SMAD3-212ENST00000559937 Q96NJ1 140 aa4.86□□□□□ -1.63
SMAD3-212ENST00000559937 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
SMAD3-212ENST00000559937 MP68P56378 58 aa4.85□□□□□ -1.63
SMAD3-212ENST00000559937 CD164Q04900 197 aa4.85□□□□□ -1.63
SMAD3-212ENST00000559937 DNAH10Q8IVF4 4471 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 KMT2AQ03164 3969 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 ASB16-AS1Q495Z4 193 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
SMAD3-212ENST00000559937 Q6ZSA8 131 aa4.83□□□□□ -1.64
SMAD3-212ENST00000559937 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
SMAD3-212ENST00000559937 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
SMAD3-212ENST00000559937 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
SMAD3-212ENST00000559937 Q5XG85 94 aa4.82□□□□□ -1.64
SMAD3-212ENST00000559937 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
SMAD3-212ENST00000559937 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
SMAD3-212ENST00000559937 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
SMAD3-212ENST00000559937 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
SMAD3-212ENST00000559937 H0Y9P7 68 aa4.81□□□□□ -1.64
SMAD3-212ENST00000559937 C8orf17Q9NRJ1 99 aa4.81□□□□□ -1.64
SMAD3-212ENST00000559937 CDK2AP2O75956 126 aa4.8□□□□□ -1.64
SMAD3-212ENST00000559937 KRTAP10-2P60368 255 aa4.8□□□□□ -1.64
SMAD3-212ENST00000559937 CIRBP-AS1Q8TBR5 109 aa4.8□□□□□ -1.64
SMAD3-212ENST00000559937 FAM229BQ4G0N7 80 aa4.79□□□□□ -1.64
SMAD3-212ENST00000559937 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
SMAD3-212ENST00000559937 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
SMAD3-212ENST00000559937 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
SMAD3-212ENST00000559937 HRCT1Q6UXD1 115 aa4.78□□□□□ -1.64
SMAD3-212ENST00000559937 ANAPC11Q9NYG5 84 aa4.78□□□□□ -1.64
SMAD3-212ENST00000559937 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
SMAD3-212ENST00000559937 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
SMAD3-212ENST00000559937 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms