RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 MTURNQ8N3F0 131 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 C6orf48Q9UBA6 75 aa3.48□□□□□ -1.85
USP3-215ENST00000559771 A0A1B0GX51 115 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 H0Y9J4 135 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 NDUFC2O95298 119 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 LINC00158P58513 81 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 UNQ6190/PRO20217Q6UXQ8 127 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 MIR7-3HGQ8N6C7 128 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 SND1-IT1Q9HBX3 110 aa3.47□□□□□ -1.85
USP3-215ENST00000559771 F8WDY8 70 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 PRYO14603 147 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 SNCGO76070 127 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 CKS1BP61024 79 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 DAND5Q8N907 189 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 TOMM7Q9P0U1 55 aa3.46□□□□□ -1.86
USP3-215ENST00000559771 H3BQ85 93 aa3.45□□□□□ -1.86
USP3-215ENST00000559771 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
USP3-215ENST00000559771 FAM19A5Q7Z5A7 132 aaPredicted RBP3.45□□□□□ -1.86
USP3-215ENST00000559771 IGLV1-50A0A075B6I6 118 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 NPC2P61916 151 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 Q6Q795 121 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 TMEM126AQ9H061 195 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
USP3-215ENST00000559771 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 TEX49A0A1B0GTD5 131 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 DNAL4O96015 105 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 BAALC-AS2P0C853 105 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 LINC00337Q8N6G1 96 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 CLEC2BQ92478 149 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 IMUPQ9GZP8 106 aa3.43□□□□□ -1.86
USP3-215ENST00000559771 A0A1B0GV72 72 aa3.42□□□□□ -1.86
USP3-215ENST00000559771 PFN2P35080 140 aa3.42□□□□□ -1.86
USP3-215ENST00000559771 SMIM11BQ8TCY0 68 aa3.42□□□□□ -1.86
USP3-215ENST00000559771 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
USP3-215ENST00000559771 A0A087X002 238 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 NDUFC2-KCTD14E9PQ53 114 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 ZNF861PO60384 105 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 PRR4Q16378 134 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 OBSCN-AS1Q96MR7 158 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
USP3-215ENST00000559771 TRBV7-6A0A0J9YX20 115 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 UBE2BP63146 152 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 OR13C6PQ8NH95 151 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 ORMDL1Q9P0S3 153 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 C22orf24Q9Y442 160 aa3.4□□□□□ -1.87
USP3-215ENST00000559771 TRBV7-7A0A0K0K1E9 115 aa3.39□□□□□ -1.87
USP3-215ENST00000559771 MT-ATP8P03928 68 aa3.39□□□□□ -1.87
USP3-215ENST00000559771 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
USP3-215ENST00000559771 XAGE1AQ9HD64 81 aa3.39□□□□□ -1.87
USP3-215ENST00000559771 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 PDE6GP18545 87 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 S100A7L2Q5SY68 101 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 KRTAP13-1Q8IUC0 172 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
USP3-215ENST00000559771 BCE1O60756 84 aa3.36□□□□□ -1.87
USP3-215ENST00000559771 LINC00575Q6W349 94 aa3.36□□□□□ -1.87
USP3-215ENST00000559771 MRPL55Q7Z7F7 128 aaKnown RBP3.36□□□□□ -1.87
USP3-215ENST00000559771 IGLV5-37A0A075B6J1 123 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 hADV29S1A0JD25 119 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 M0R378 163 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 CCKP06307 115 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 NDUFV3P56181 108 aaKnown RBP3.35□□□□□ -1.87
USP3-215ENST00000559771 C6orf99Q4VX62 202 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.35□□□□□ -1.87
USP3-215ENST00000559771 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
USP3-215ENST00000559771 TRAV23DV6A0A075B6W5 121 aa3.34□□□□□ -1.87
USP3-215ENST00000559771 LOC110117498A0A087WWA1 95 aa3.34□□□□□ -1.87
USP3-215ENST00000559771 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
USP3-215ENST00000559771 CRYGAP11844 174 aa3.34□□□□□ -1.87
USP3-215ENST00000559771 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
USP3-215ENST00000559771 TRBV10-3A0A0K0K1G6 114 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 NCR3O14931 201 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 ZNF73O43830 326 aaPredicted RBP3.33□□□□□ -1.88
USP3-215ENST00000559771 VPREB1P12018 145 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
USP3-215ENST00000559771 Q6JHZ5 121 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 Q8NDZ9 215 aa3.33□□□□□ -1.88
USP3-215ENST00000559771 A0A1B0GW54 56 aa3.32□□□□□ -1.88
USP3-215ENST00000559771 COX7BP24311 80 aa3.32□□□□□ -1.88
USP3-215ENST00000559771 ELOF1P60002 83 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms