RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 F8WEM9 126 aa8.5□□□□□ -1.05
TPM1-215ENST00000558868 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
TPM1-215ENST00000558868 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
TPM1-215ENST00000558868 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
TPM1-215ENST00000558868 SPRR1BP22528 89 aa8.48□□□□□ -1.05
TPM1-215ENST00000558868 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
TPM1-215ENST00000558868 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
TPM1-215ENST00000558868 DNAH11Q96DT5 4516 aa8.46□□□□□ -1.05
TPM1-215ENST00000558868 LCE2BO14633 110 aa8.46□□□□□ -1.06
TPM1-215ENST00000558868 ZNF861PO60384 105 aa8.46□□□□□ -1.06
TPM1-215ENST00000558868 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
TPM1-215ENST00000558868 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
TPM1-215ENST00000558868 A0A1B0GW54 56 aa8.44□□□□□ -1.06
TPM1-215ENST00000558868 XGP55808 180 aa8.44□□□□□ -1.06
TPM1-215ENST00000558868 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
TPM1-215ENST00000558868 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
TPM1-215ENST00000558868 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
TPM1-215ENST00000558868 LINC00846Q9NV44 126 aa8.43□□□□□ -1.06
TPM1-215ENST00000558868 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
TPM1-215ENST00000558868 IGLV8-61A0A075B6I0 122 aa8.42□□□□□ -1.06
TPM1-215ENST00000558868 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
TPM1-215ENST00000558868 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
TPM1-215ENST00000558868 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
TPM1-215ENST00000558868 MT-ATP8P03928 68 aa8.41□□□□□ -1.06
TPM1-215ENST00000558868 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
TPM1-215ENST00000558868 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
TPM1-215ENST00000558868 Q6JHZ5 121 aa8.4□□□□□ -1.06
TPM1-215ENST00000558868 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
TPM1-215ENST00000558868 PKD1P98161 4303 aa8.39□□□□□ -1.07
TPM1-215ENST00000558868 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
TPM1-215ENST00000558868 Q8NBF4 154 aa8.37□□□□□ -1.07
TPM1-215ENST00000558868 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
TPM1-215ENST00000558868 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
TPM1-215ENST00000558868 RPL37AP61513 92 aaKnown RBP8.35□□□□□ -1.07
TPM1-215ENST00000558868 Q6Q795 121 aa8.35□□□□□ -1.07
TPM1-215ENST00000558868 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
TPM1-215ENST00000558868 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
TPM1-215ENST00000558868 A0A1W2PNM2 257 aa8.34□□□□□ -1.07
TPM1-215ENST00000558868 HAMPP81172 84 aa8.33□□□□□ -1.08
TPM1-215ENST00000558868 Q6ZVQ6 151 aa8.33□□□□□ -1.08
TPM1-215ENST00000558868 CRYGAP11844 174 aa8.32□□□□□ -1.08
TPM1-215ENST00000558868 NREPQ16612 68 aa8.32□□□□□ -1.08
TPM1-215ENST00000558868 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
TPM1-215ENST00000558868 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
TPM1-215ENST00000558868 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
TPM1-215ENST00000558868 CXCL6P80162 114 aa8.28□□□□□ -1.08
TPM1-215ENST00000558868 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
TPM1-215ENST00000558868 MOBPQ13875 183 aa8.24□□□□□ -1.09
TPM1-215ENST00000558868 PKHD1P08F94 4074 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 BPY2O14599 106 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 ANAPC11Q9NYG5 84 aa8.23□□□□□ -1.09
TPM1-215ENST00000558868 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
TPM1-215ENST00000558868 A0A087WSZ3 146 aa8.22□□□□□ -1.09
TPM1-215ENST00000558868 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.1
TPM1-215ENST00000558868 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
TPM1-215ENST00000558868 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
TPM1-215ENST00000558868 SS18L2Q9UHA2 77 aa8.19□□□□□ -1.1
TPM1-215ENST00000558868 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
TPM1-215ENST00000558868 PCP4P48539 62 aa8.18□□□□□ -1.1
TPM1-215ENST00000558868 CD164Q04900 197 aa8.18□□□□□ -1.1
TPM1-215ENST00000558868 HSPG2P98160 4391 aa8.18□□□□□ -1.1
TPM1-215ENST00000558868 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
TPM1-215ENST00000558868 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
TPM1-215ENST00000558868 CDK2AP2O75956 126 aa8.15□□□□□ -1.1
TPM1-215ENST00000558868 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
TPM1-215ENST00000558868 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
TPM1-215ENST00000558868 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
TPM1-215ENST00000558868 A0A087WVE0 104 aa8.13□□□□□ -1.11
TPM1-215ENST00000558868 J3KT08 172 aa8.13□□□□□ -1.11
TPM1-215ENST00000558868 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
TPM1-215ENST00000558868 ANAPC13Q9BS18 74 aa8.12□□□□□ -1.11
TPM1-215ENST00000558868 A0A087X002 238 aa8.11□□□□□ -1.11
TPM1-215ENST00000558868 ATOX1O00244 68 aa8.11□□□□□ -1.11
TPM1-215ENST00000558868 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
TPM1-215ENST00000558868 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
TPM1-215ENST00000558868 J3QL48 77 aa8.1□□□□□ -1.11
TPM1-215ENST00000558868 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
TPM1-215ENST00000558868 DMBT1Q9UGM3 2413 aaPredicted RBP8.09□□□□□ -1.11
TPM1-215ENST00000558868 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
TPM1-215ENST00000558868 DSCR10P59022 87 aa8.09□□□□□ -1.11
TPM1-215ENST00000558868 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
TPM1-215ENST00000558868 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
TPM1-215ENST00000558868 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
TPM1-215ENST00000558868 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
TPM1-215ENST00000558868 Q8N9L7 120 aa8.07□□□□□ -1.12
TPM1-215ENST00000558868 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
TPM1-215ENST00000558868 A8MWP4 228 aa8.05□□□□□ -1.12
TPM1-215ENST00000558868 NDUFB1O75438 58 aa8.05□□□□□ -1.12
TPM1-215ENST00000558868 DEFB116Q30KQ4 102 aa8.05□□□□□ -1.12
TPM1-215ENST00000558868 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
TPM1-215ENST00000558868 K7EQZ3 153 aa8.04□□□□□ -1.12
TPM1-215ENST00000558868 Q5XG85 94 aa8.04□□□□□ -1.12
TPM1-215ENST00000558868 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
TPM1-215ENST00000558868 Q96NJ1 140 aa8.03□□□□□ -1.12
TPM1-215ENST00000558868 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
TPM1-215ENST00000558868 PRR15Q8IV56 129 aa8.02□□□□□ -1.13
TPM1-215ENST00000558868 SPINK1P00995 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms