RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 LAMTOR3Q9UHA4 124 aa4.48□□□□□ -1.69
TRAF3-205ENST00000558700 C20orf202A1L168 122 aa4.47□□□□□ -1.69
TRAF3-205ENST00000558700 SCGB1D4Q6XE38 83 aa4.47□□□□□ -1.69
TRAF3-205ENST00000558700 OCR1Q9BZK8 76 aa4.47□□□□□ -1.69
TRAF3-205ENST00000558700 C3orf79P0CE67 100 aa4.46□□□□□ -1.7
TRAF3-205ENST00000558700 KRTDAPP60985 99 aa4.46□□□□□ -1.7
TRAF3-205ENST00000558700 C6orf99Q4VX62 202 aa4.46□□□□□ -1.7
TRAF3-205ENST00000558700 TTTY13Q9BZ97 58 aa4.46□□□□□ -1.7
TRAF3-205ENST00000558700 TRBV7-6A0A0J9YX20 115 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 IFITM1P13164 125 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 AKR1D1P51857 326 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 CD164Q04900 197 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 TAL2Q16559 108 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 Q1RN00 199 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
TRAF3-205ENST00000558700 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 Q6ZVH6 145 aa4.44□□□□□ -1.7
TRAF3-205ENST00000558700 TEX49A0A1B0GTD5 131 aa4.43□□□□□ -1.7
TRAF3-205ENST00000558700 A0A1B0GWB2 263 aa4.43□□□□□ -1.7
TRAF3-205ENST00000558700 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
TRAF3-205ENST00000558700 PRO1933Q9H354 126 aa4.43□□□□□ -1.7
TRAF3-205ENST00000558700 A6NDN8 102 aa4.42□□□□□ -1.7
TRAF3-205ENST00000558700 H7C2G1 150 aa4.42□□□□□ -1.7
TRAF3-205ENST00000558700 DEFB105AQ8NG35 78 aa4.42□□□□□ -1.7
TRAF3-205ENST00000558700 NHP2Q9NX24 153 aaKnown RBP4.42□□□□□ -1.7
TRAF3-205ENST00000558700 IGLV5-48A0A075B6I7 105 aa4.41□□□□□ -1.7
TRAF3-205ENST00000558700 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
TRAF3-205ENST00000558700 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.71
TRAF3-205ENST00000558700 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
TRAF3-205ENST00000558700 Q5XG85 94 aa4.4□□□□□ -1.71
TRAF3-205ENST00000558700 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
TRAF3-205ENST00000558700 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
TRAF3-205ENST00000558700 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
TRAF3-205ENST00000558700 PCP2Q8IVA1 136 aa4.39□□□□□ -1.71
TRAF3-205ENST00000558700 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
TRAF3-205ENST00000558700 F8WEM9 126 aa4.38□□□□□ -1.71
TRAF3-205ENST00000558700 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
TRAF3-205ENST00000558700 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
TRAF3-205ENST00000558700 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
TRAF3-205ENST00000558700 HSBP1L1C9JCN9 74 aa4.36□□□□□ -1.71
TRAF3-205ENST00000558700 TCL1BO95988 128 aa4.36□□□□□ -1.71
TRAF3-205ENST00000558700 VAMP3Q15836 100 aa4.36□□□□□ -1.71
TRAF3-205ENST00000558700 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
TRAF3-205ENST00000558700 S100A2P29034 98 aa4.35□□□□□ -1.71
TRAF3-205ENST00000558700 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
TRAF3-205ENST00000558700 CFC1BP0CG36 223 aa4.34□□□□□ -1.71
TRAF3-205ENST00000558700 Q6JHZ5 121 aa4.34□□□□□ -1.71
TRAF3-205ENST00000558700 LINC00575Q6W349 94 aa4.34□□□□□ -1.71
TRAF3-205ENST00000558700 CFC1P0CG37 223 aa4.33□□□□□ -1.72
TRAF3-205ENST00000558700 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
TRAF3-205ENST00000558700 Q6ZQY7 126 aa4.33□□□□□ -1.72
TRAF3-205ENST00000558700 HIST3H2BBQ8N257 126 aa4.33□□□□□ -1.72
TRAF3-205ENST00000558700 CLEC2BQ92478 149 aa4.33□□□□□ -1.72
TRAF3-205ENST00000558700 HIST1H2BLQ99880 126 aa4.33□□□□□ -1.72
TRAF3-205ENST00000558700 hADV29S1A0JD25 119 aa4.32□□□□□ -1.72
TRAF3-205ENST00000558700 S100A1P23297 94 aa4.32□□□□□ -1.72
TRAF3-205ENST00000558700 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
TRAF3-205ENST00000558700 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
TRAF3-205ENST00000558700 MT1HP80294 61 aa4.31□□□□□ -1.72
TRAF3-205ENST00000558700 BVES-AS1Q5T3Y7 98 aa4.31□□□□□ -1.72
TRAF3-205ENST00000558700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
TRAF3-205ENST00000558700 PPDPFLQ8WWR9 84 aa4.31□□□□□ -1.72
TRAF3-205ENST00000558700 TRBV7-7A0A0K0K1E9 115 aa4.3□□□□□ -1.72
TRAF3-205ENST00000558700 S100A6P06703 90 aa4.3□□□□□ -1.72
TRAF3-205ENST00000558700 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
TRAF3-205ENST00000558700 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
TRAF3-205ENST00000558700 COX6B2Q6YFQ2 88 aa4.29□□□□□ -1.72
TRAF3-205ENST00000558700 HIST1H4GQ99525 98 aa4.29□□□□□ -1.72
TRAF3-205ENST00000558700 C12orf57Q99622 126 aa4.29□□□□□ -1.72
TRAF3-205ENST00000558700 OCIAD2Q56VL3 154 aa4.28□□□□□ -1.72
TRAF3-205ENST00000558700 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
TRAF3-205ENST00000558700 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
TRAF3-205ENST00000558700 M0R2T5 61 aa4.26□□□□□ -1.73
TRAF3-205ENST00000558700 SNCGO76070 127 aa4.26□□□□□ -1.73
TRAF3-205ENST00000558700 COX8AP10176 69 aa4.26□□□□□ -1.73
TRAF3-205ENST00000558700 H3BUT2 72 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 LST1O00453 97 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 DLEU1O43261 78 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 RAB37Q96AX2 223 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 OBSCN-AS1Q96MR7 158 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
TRAF3-205ENST00000558700 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
TRAF3-205ENST00000558700 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
TRAF3-205ENST00000558700 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
TRAF3-205ENST00000558700 H0YGX0 51 aa4.23□□□□□ -1.73
TRAF3-205ENST00000558700 Q6Q795 121 aa4.23□□□□□ -1.73
TRAF3-205ENST00000558700 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
TRAF3-205ENST00000558700 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
TRAF3-205ENST00000558700 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
TRAF3-205ENST00000558700 SPATA45Q537H7 98 aa4.21□□□□□ -1.74
TRAF3-205ENST00000558700 VAMP8Q9BV40 100 aa4.21□□□□□ -1.74
TRAF3-205ENST00000558700 A0A1B0GX51 115 aa4.2□□□□□ -1.74
TRAF3-205ENST00000558700 C14orf144Q96I85 54 aa4.2□□□□□ -1.74
TRAF3-205ENST00000558700 Q96NJ1 140 aa4.2□□□□□ -1.74
TRAF3-205ENST00000558700 A0A087WSZ3 146 aa4.19□□□□□ -1.74
TRAF3-205ENST00000558700 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
TRAF3-205ENST00000558700 H3BMG7 143 aa4.18□□□□□ -1.74
TRAF3-205ENST00000558700 FABP2P12104 132 aa4.18□□□□□ -1.74
TRAF3-205ENST00000558700 CXCL6P80162 114 aa4.18□□□□□ -1.74
TRAF3-205ENST00000558700 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms