RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 MT2AP02795 61 aa9.08□□□□□ -0.96
TSPAN3-204ENST00000558394 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
TSPAN3-204ENST00000558394 LCE2BO14633 110 aa9.07□□□□□ -0.96
TSPAN3-204ENST00000558394 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
TSPAN3-204ENST00000558394 Q96NJ1 140 aa9.04□□□□□ -0.96
TSPAN3-204ENST00000558394 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
TSPAN3-204ENST00000558394 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
TSPAN3-204ENST00000558394 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
TSPAN3-204ENST00000558394 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
TSPAN3-204ENST00000558394 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
TSPAN3-204ENST00000558394 SCGB1D4Q6XE38 83 aa9.02□□□□□ -0.97
TSPAN3-204ENST00000558394 A4D1N5 150 aa9.01□□□□□ -0.97
TSPAN3-204ENST00000558394 MT1FP04733 61 aa9.01□□□□□ -0.97
TSPAN3-204ENST00000558394 TRBV7-7A0A0K0K1E9 115 aa9□□□□□ -0.97
TSPAN3-204ENST00000558394 KRTDAPP60985 99 aa9□□□□□ -0.97
TSPAN3-204ENST00000558394 A6NDN8 102 aa8.99□□□□□ -0.97
TSPAN3-204ENST00000558394 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
TSPAN3-204ENST00000558394 Q6JHZ5 121 aa8.98□□□□□ -0.97
TSPAN3-204ENST00000558394 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
TSPAN3-204ENST00000558394 CLEC2BQ92478 149 aa8.97□□□□□ -0.97
TSPAN3-204ENST00000558394 ANKRD39Q53RE8 183 aa8.96□□□□□ -0.98
TSPAN3-204ENST00000558394 IGFL1Q6UW32 110 aa8.96□□□□□ -0.98
TSPAN3-204ENST00000558394 LST1O00453 97 aa8.95□□□□□ -0.98
TSPAN3-204ENST00000558394 IFITM1P13164 125 aa8.95□□□□□ -0.98
TSPAN3-204ENST00000558394 COA6Q5JTJ3 125 aaKnown RBP8.94□□□□□ -0.98
TSPAN3-204ENST00000558394 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TSPAN3-204ENST00000558394 Q6ZVH6 145 aa8.93□□□□□ -0.98
TSPAN3-204ENST00000558394 ATOH7Q8N100 152 aa8.93□□□□□ -0.98
TSPAN3-204ENST00000558394 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
TSPAN3-204ENST00000558394 MUSTN1Q8IVN3 82 aa8.91□□□□□ -0.98
TSPAN3-204ENST00000558394 A8MUU9 505 aa8.9□□□□□ -0.98
TSPAN3-204ENST00000558394 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
TSPAN3-204ENST00000558394 VAMP3Q15836 100 aa8.88□□□□□ -0.99
TSPAN3-204ENST00000558394 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
TSPAN3-204ENST00000558394 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
TSPAN3-204ENST00000558394 SMIM11BQ8TCY0 68 aa8.87□□□□□ -0.99
TSPAN3-204ENST00000558394 Q6ZQY7 126 aa8.85□□□□□ -0.99
TSPAN3-204ENST00000558394 KRTAP6-3Q3LI67 103 aa8.84□□□□□ -0.99
TSPAN3-204ENST00000558394 SS18L2Q9UHA2 77 aa8.84□□□□□ -0.99
TSPAN3-204ENST00000558394 hADV29S1A0JD25 119 aa8.82□□□□□ -1
TSPAN3-204ENST00000558394 SNRPEP62304 92 aaKnown RBP8.82□□□□□ -1
TSPAN3-204ENST00000558394 LINC00575Q6W349 94 aa8.81□□□□□ -1
TSPAN3-204ENST00000558394 SNHG12Q9BXW3 62 aa8.79□□□□□ -1
TSPAN3-204ENST00000558394 SCGB1D1O95968 90 aa8.78□□□□□ -1
TSPAN3-204ENST00000558394 DSCR10P59022 87 aa8.76□□□□□ -1.01
TSPAN3-204ENST00000558394 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
TSPAN3-204ENST00000558394 H3BUT2 72 aa8.75□□□□□ -1.01
TSPAN3-204ENST00000558394 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
TSPAN3-204ENST00000558394 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
TSPAN3-204ENST00000558394 HRES1P13985 223 aa8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 S100A2P29034 98 aa8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 HIST3H2BBQ8N257 126 aa8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 MPLKIPQ8TAP9 179 aa8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
TSPAN3-204ENST00000558394 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
TSPAN3-204ENST00000558394 C12orf57Q99622 126 aa8.7□□□□□ -1.02
TSPAN3-204ENST00000558394 LINC00313P59037 77 aa8.69□□□□□ -1.02
TSPAN3-204ENST00000558394 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
TSPAN3-204ENST00000558394 SIGMAR1Q99720 223 aa8.69□□□□□ -1.02
TSPAN3-204ENST00000558394 A0A087WSZ3 146 aa8.68□□□□□ -1.02
TSPAN3-204ENST00000558394 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
TSPAN3-204ENST00000558394 NEBP20929 6669 aa8.66□□□□□ -1.02
TSPAN3-204ENST00000558394 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
TSPAN3-204ENST00000558394 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
TSPAN3-204ENST00000558394 A8MWP4 228 aa8.62□□□□□ -1.03
TSPAN3-204ENST00000558394 S100A6P06703 90 aa8.62□□□□□ -1.03
TSPAN3-204ENST00000558394 COX8AP10176 69 aa8.6□□□□□ -1.03
TSPAN3-204ENST00000558394 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
TSPAN3-204ENST00000558394 SNCGO76070 127 aa8.58□□□□□ -1.04
TSPAN3-204ENST00000558394 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
TSPAN3-204ENST00000558394 RAB37Q96AX2 223 aa8.57□□□□□ -1.04
TSPAN3-204ENST00000558394 DLEU1O43261 78 aa8.55□□□□□ -1.04
TSPAN3-204ENST00000558394 NDUFV3P56181 108 aaKnown RBP8.55□□□□□ -1.04
TSPAN3-204ENST00000558394 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
TSPAN3-204ENST00000558394 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
TSPAN3-204ENST00000558394 H0YGX0 51 aa8.52□□□□□ -1.05
TSPAN3-204ENST00000558394 H3BMG7 143 aa8.52□□□□□ -1.05
TSPAN3-204ENST00000558394 KRTAP20-1Q3LI63 56 aa8.51□□□□□ -1.05
TSPAN3-204ENST00000558394 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
TSPAN3-204ENST00000558394 IGHV6-1A0A0B4J1U7 121 aa8.49□□□□□ -1.05
TSPAN3-204ENST00000558394 S100A1P23297 94 aa8.49□□□□□ -1.05
TSPAN3-204ENST00000558394 HIGD1BQ9P298 99 aa8.49□□□□□ -1.05
TSPAN3-204ENST00000558394 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
TSPAN3-204ENST00000558394 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
TSPAN3-204ENST00000558394 GHRHP01286 108 aa8.47□□□□□ -1.05
TSPAN3-204ENST00000558394 SPINK7P58062 85 aa8.47□□□□□ -1.05
TSPAN3-204ENST00000558394 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.05
TSPAN3-204ENST00000558394 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
TSPAN3-204ENST00000558394 A0A1B0GX51 115 aa8.45□□□□□ -1.06
TSPAN3-204ENST00000558394 A0A1W2PNM2 257 aa8.45□□□□□ -1.06
TSPAN3-204ENST00000558394 FABP2P12104 132 aa8.45□□□□□ -1.06
TSPAN3-204ENST00000558394 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
TSPAN3-204ENST00000558394 VAMP8Q9BV40 100 aa8.44□□□□□ -1.06
TSPAN3-204ENST00000558394 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
TSPAN3-204ENST00000558394 A6NJY4 79 aa8.43□□□□□ -1.06
TSPAN3-204ENST00000558394 CEND1Q8N111 149 aa8.43□□□□□ -1.06
TSPAN3-204ENST00000558394 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
TSPAN3-204ENST00000558394 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
TSPAN3-204ENST00000558394 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms