RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DEFB130AP0DP74 79 aa0.92□□□□□ -2.26
SPG11-206ENST00000558093 SPRR1AP35321 89 aa0.92□□□□□ -2.26
SPG11-206ENST00000558093 ZNF462Q96JM2 2506 aa0.91□□□□□ -2.26
SPG11-206ENST00000558093 WNK2Q9Y3S1 2297 aa0.91□□□□□ -2.26
SPG11-206ENST00000558093 RPL39P62891 51 aaKnown RBP0.91□□□□□ -2.26
SPG11-206ENST00000558093 DEFB105AQ8NG35 78 aa0.91□□□□□ -2.26
SPG11-206ENST00000558093 KAAG1Q9UBP8 84 aa0.91□□□□□ -2.26
SPG11-206ENST00000558093 KLK9Q2XQG4 91 aa0.9□□□□□ -2.27
SPG11-206ENST00000558093 TPRP12270 2363 aaKnown RBP0.9□□□□□ -2.27
SPG11-206ENST00000558093 PCNX1Q96RV3 2341 aa0.89□□□□□ -2.27
SPG11-206ENST00000558093 H3BSH0 61 aa0.89□□□□□ -2.27
SPG11-206ENST00000558093 SPRR1BP22528 89 aa0.89□□□□□ -2.27
SPG11-206ENST00000558093 POLR2KP53803 58 aaKnown RBP0.89□□□□□ -2.27
SPG11-206ENST00000558093 SPINK9Q5DT21 86 aa0.89□□□□□ -2.27
SPG11-206ENST00000558093 RPL39LQ96EH5 51 aaKnown RBP0.89□□□□□ -2.27
SPG11-206ENST00000558093 CSPG4Q6UVK1 2322 aa0.88□□□□□ -2.27
SPG11-206ENST00000558093 SPTBN1Q01082 2364 aaKnown RBP0.88□□□□□ -2.27
SPG11-206ENST00000558093 DSPP15924 2871 aaKnown RBP0.87□□□□□ -2.27
SPG11-206ENST00000558093 CEP350Q5VT06 3117 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 A0A0C4DFX4 3053 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 ZNF292O60281 2723 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 IGLV5-48A0A075B6I7 105 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 Q5VSD8 79 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 LEAP2Q969E1 77 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 SPTBN2O15020 2390 aa0.87□□□□□ -2.27
SPG11-206ENST00000558093 A0A0D9SG42 100 aa0.86□□□□□ -2.27
SPG11-206ENST00000558093 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
SPG11-206ENST00000558093 PRLHP81277 87 aa0.86□□□□□ -2.27
SPG11-206ENST00000558093 LINC01590Q5TEZ4 76 aa0.86□□□□□ -2.27
SPG11-206ENST00000558093 CACNA1HO95180 2353 aa0.85□□□□□ -2.27
SPG11-206ENST00000558093 UTRNP46939 3433 aa0.85□□□□□ -2.27
SPG11-206ENST00000558093 ABCA12Q86UK0 2595 aa0.84□□□□□ -2.27
SPG11-206ENST00000558093 GVINP1Q7Z2Y8 2422 aa0.84□□□□□ -2.27
SPG11-206ENST00000558093 DEFB131AP59861 70 aa0.84□□□□□ -2.27
SPG11-206ENST00000558093 TRANK1O15050 2925 aa0.84□□□□□ -2.28
SPG11-206ENST00000558093 H3BUA1 57 aa0.83□□□□□ -2.28
SPG11-206ENST00000558093 S4R3F8 94 aa0.83□□□□□ -2.28
SPG11-206ENST00000558093 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
SPG11-206ENST00000558093 F8P00451 2351 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 ABCA2Q9BZC7 2435 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 DEFB106AQ8N104 65 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 CELSR1Q9NYQ6 3014 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 CHD9Q3L8U1 2897 aa0.82□□□□□ -2.28
SPG11-206ENST00000558093 PRRC2CQ9Y520 2896 aaKnown RBP0.82□□□□□ -2.28
SPG11-206ENST00000558093 MEGF8Q7Z7M0 2845 aa0.81□□□□□ -2.28
SPG11-206ENST00000558093 SPTBN5Q9NRC6 3674 aaKnown RBP0.81□□□□□ -2.28
SPG11-206ENST00000558093 A8MTW9 85 aa0.81□□□□□ -2.28
SPG11-206ENST00000558093 DEFB104AQ8WTQ1 72 aa0.81□□□□□ -2.28
SPG11-206ENST00000558093 EP400Q96L91 3159 aa0.81□□□□□ -2.28
SPG11-206ENST00000558093 TNRC18O15417 2968 aaPredicted RBP0.8□□□□□ -2.28
SPG11-206ENST00000558093 KRTAP10-4P60372 401 aaPredicted RBP0.8□□□□□ -2.28
SPG11-206ENST00000558093 PRCDQ00LT1 54 aa0.8□□□□□ -2.28
SPG11-206ENST00000558093 TOMM7Q9P0U1 55 aa0.8□□□□□ -2.28
SPG11-206ENST00000558093 POLQO75417 2590 aa0.8□□□□□ -2.28
SPG11-206ENST00000558093 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
SPG11-206ENST00000558093 M0QY20 66 aa0.79□□□□□ -2.28
SPG11-206ENST00000558093 SPINK1P00995 79 aa0.79□□□□□ -2.28
SPG11-206ENST00000558093 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
SPG11-206ENST00000558093 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
SPG11-206ENST00000558093 SRRM2Q9UQ35 2752 aaKnown RBP0.79□□□□□ -2.28
SPG11-206ENST00000558093 CEP290O15078 2479 aa0.78□□□□□ -2.28
SPG11-206ENST00000558093 AKAP13Q12802 2813 aa0.78□□□□□ -2.28
SPG11-206ENST00000558093 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
SPG11-206ENST00000558093 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
SPG11-206ENST00000558093 PCNTO95613 3336 aa0.78□□□□□ -2.28
SPG11-206ENST00000558093 SZT2Q5T011 3432 aa0.77□□□□□ -2.29
SPG11-206ENST00000558093 AKAP6Q13023 2319 aa0.77□□□□□ -2.29
SPG11-206ENST00000558093 NCOR1O75376 2440 aa0.77□□□□□ -2.29
SPG11-206ENST00000558093 MUC3AQ02505 3323 aa0.76□□□□□ -2.29
SPG11-206ENST00000558093 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
SPG11-206ENST00000558093 NOP10Q9NPE3 64 aaKnown RBP0.76□□□□□ -2.29
SPG11-206ENST00000558093 OTOGQ6ZRI0 2925 aa0.76□□□□□ -2.29
SPG11-206ENST00000558093 CACNA1AO00555 2505 aa0.76□□□□□ -2.29
SPG11-206ENST00000558093 VPS13DQ5THJ4 4388 aa0.75□□□□□ -2.29
SPG11-206ENST00000558093 MGAQ8IWI9 3026 aa0.75□□□□□ -2.29
SPG11-206ENST00000558093 EP300Q09472 2414 aaPredicted RBP0.75□□□□□ -2.29
SPG11-206ENST00000558093 GOLGB1Q14789 3259 aaKnown RBP0.75□□□□□ -2.29
SPG11-206ENST00000558093 ACACAQ13085 2346 aa0.75□□□□□ -2.29
SPG11-206ENST00000558093 VCANP13611 3396 aa0.75□□□□□ -2.29
SPG11-206ENST00000558093 TENM2Q9NT68 2774 aa0.74□□□□□ -2.29
SPG11-206ENST00000558093 ATRQ13535 2644 aa0.74□□□□□ -2.29
SPG11-206ENST00000558093 VWFP04275 2813 aa0.74□□□□□ -2.29
SPG11-206ENST00000558093 COL6A5A8TX70 2615 aa0.74□□□□□ -2.29
SPG11-206ENST00000558093 PKD1L2Q7Z442 2459 aa0.74□□□□□ -2.29
SPG11-206ENST00000558093 COL6A3P12111 3177 aa0.73□□□□□ -2.29
SPG11-206ENST00000558093 UBR5O95071 2799 aaPredicted RBP0.73□□□□□ -2.29
SPG11-206ENST00000558093 FBN2P35556 2912 aa0.73□□□□□ -2.29
SPG11-206ENST00000558093 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
SPG11-206ENST00000558093 WNK1Q9H4A3 2382 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 DNAH11Q96DT5 4516 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 SPTA1P02549 2419 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 UNC80Q8N2C7 3258 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 CCDC168Q8NDH2 2452 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 CREBBPQ92793 2442 aa0.72□□□□□ -2.29
SPG11-206ENST00000558093 SETXQ7Z333 2677 aaKnown RBP0.71□□□□□ -2.29
SPG11-206ENST00000558093 BRCA2P51587 3418 aa0.71□□□□□ -2.3
SPG11-206ENST00000558093 BSNQ9UPA5 3926 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms